GEISHA - A Chicken Embryo Gene Expression Database
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ATF6B
activating transcription factor 6 beta

Gene
Official SymbolATF6B
Official Full Nameactivating transcription factor 6 beta
CGNC ID1914
also known asATF6, cyclic AMP-dependent transcription factor ATF-6 alpha
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNAXM_422208
PolypeptideXP_422208
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human22926ENSG00000118217MIM:605537
Mouse226641ENSMUSG00000026663All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(1) Gene trapped(1) MGI:1926157
Xenopus100498199, 496056983813
Zebrafish558071ZDB-GENE-041014-328ZFIN:ZDB-GENE-041014-328
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424365
Ensembl Gene
KEGGgga:424365
GEISHA IdATF6.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATGCCCCCGACTGCTGGAAATGG
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGTCAGGGCGTGGGGTGTCTCTGcDNA Template Length1184
Forward cDNA Template Probeshow
ACCCCCAGAGTCCGGAGGGGAGGCTGGCCCTCAATGATGTGAGGATACTGGAGCCCATGGTTTACAACCCGTAGTCAGC
CTTTTCGTCACGGAACAAAAAAAAGGACCCATGCTAAGAATATAGCCAAGGTTGAAGCTGGCTTAATGGAAAATGAAAA
TGGGCATAAAGAAAAACGTACCCTGAAGAAGCAGCTGGACTAAGTGGTGTTTAAGAACCCGAAACTCCAAATAACCTCC
CCCCAATAAAGAAACCTATGTGTGGAGGTGATTACTGGCTTTTTATAAAGATGAATTACAGTCCCCCCACTGATTTTTC
AAAAAAAATCCCAAGGGAATTTATTCCCCTGTGAGTTCCAACCACCGGAACCAAAGAACTTCCTGGAATTTTTCAACTA
CCAAGGGAGACCCCAGCCCCATCTCAAAAAAAAATCCCATCGACAACATTTTTTTGAGAAGATTAATACCATATTGAAA
TTCTGTGTCCGATAACAAAACGTTGTATGATTAATCTTCTGAAAAACCACTGTTGGTATAATTTTTACCCCCAACCACC
ACGCCTGTTGGCCCCCTAATTAACCCACAAAGAGGTTCTTAAAGGCGGAATCATTAAACTTTTCTGGGGAAAGGGGGAT
CCCAAAACTAGAAAGTGGAAAAAAAAAAAAGGTCTGAAAAAAGAAAGGTCCCATTAAATCAAGCTTTCCGAAAAGACCG
GGGGGATTCCCTGAACCTCCCCTTAAAACAAAAAGGGAGCATTTCCTTGAACCCAGAGTGGGGCAGGGCCTTTACCAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
stage 6
Extraembryonic Mesoderm
Headfold
Neural Plate/Tube
Primitive Streak
Unlabeled
no staining stages 6,7
very faint
7-12
stage 8
stage 9
stage 10
stage 11
stage 12
Anterior Intestinal Portal
Head Mesenchyme
Intermediate Mesoderm
Neural Plate/Tube
Primitive Streak
Low level expression.
13-18
stage 18
stage 18
Eye
Head Mesenchyme
Heart
Leg
Limb Buds
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Trunk Mesenchyme
Wing
 
19-24
stage 23
Endoderm
Eye
Somatic Mesoderm
Somites
Spinal Cord
 
25
stage 25
stage 25
Endoderm
Eye
Outflow Tract
Pharyngeal Arches and Clefts
Somites
Spinal Cord
 

Mouse

EmageMGI:1926157
MGI GXDMGI:1926157

Frog

Xenbase983813

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041014-328
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