Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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	Transcription Factors
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ETV1
ETS variant 1

Gene

Official Symbol	ETV1
Official Full Name	ETS variant 1
BirdBase ID	BB-GG3368
CGNC ID	8196
also known as	ER81, ETS translocation variant 1\|ets domain protein\|ets variant gene 1, ER81, ETV1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204917
Polypeptide	NP_990248
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.2999

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	2115	ENSG00000006468		MIM:600541
Mouse	14009	ENSMUSG00000004151	All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(4)	MGI:99254
Xenopus	394827, 398358			489878
Zebrafish	563876	ENSDARG00000055183	ZDB-GENE-070104-1	ZFIN:ZDB-GENE-070104-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395748
Ensembl Gene
KEGG	gga:395748

GEISHA Id	Er81.Lunn.2007	Data Source	Publication
Complete cDNA Template Probe	show CTGCTTCCGAGGGGGAAGTGCCGGGGAATAATTAATGTTTTTATTAAATTTGGAGGGAAATTTTTTGCAGCCGATCGCC GCGCGTGGCCTTCAGGCTGATTGGAGTCCAGATCCCGAGGAAATCTCCAGATCCAATGCCCACTAAATAAAACACTGAG CTCAGACTCGTGGAAGAGCCACAGGATGGATGGATTTTATGACCAGCAAGTGCCTTACATGGTCACCAATAATCCGCGT GGGAGAAACTGTAATGAGAGACCGACAAATGTCAGGAAAAGAAAATTCATTAACAGAGACCTGGCTCATGATTCAGAAG AACTCTTTCAAGATCTGAGCCAATTACAGGAGACATGGCTTGCAGAAGCTCAGGTACCTGACAATGACGAGCAGTTTGT GCCAGACTATCAGGCTGAAAGTTTGGCTTTTCATGGTCTCCCTGTGAAAATCAAGAAGGAACCCCATAGCCCATGTTCA GAACTTGGCTCTGCTTGTAGTCAAGAGCAACCATTCAAGTTCAGTTATGGGGAAAAGTGCCTGTACAATGTCAGTGCCT ATGATCAGAAGCCACAAGTGGGAATGAGGCCCTCCAACCCACCAACGCCATCCAGCACTCCTGTGTCACCACTGCACCA TGCCTCCCCAAACTCAGCTCAGACTCCTAAACCTGACCGGGTTTTCCCTGCCCATCTCCCTCCATCCCAATCCATTCAA GACAACAGCTTCCCTATGGACCACAGATTTCGCCGCCAGCTCTCTGAACCTTGCAATTCTTTTCCACCTTTGCCTGCAA TGCCGAGGGAAGGACGTCCAATATATCAGCGGCAGATGTCTGAGCCTAACATCCCCTTCCCGCCTCAAGGTTTTAAGCA GGAGTATCACGATCCAGTTTATGAACACAACGCCATGGTTGGCAGTGCAGCCAGTCAAAATTTCCCCCCTCCTCTGATG ATTAAACAGGAACCTAGAGATTTTGCATATGATTCAGAAGTGCCTAGCTGCCATTCCATTTACATGAGGCAAGAAGGCT TCCTGGCTCACCCAAACAGAACAGAAGGTTGTATGTATGAAAAGGGACCTAGGCAGTTTTATGATGACACTTGTGTTGT TCCAGAGAAGTTTGACGGTGATGTCAAACAGGAACCAGGCATGTACCGTGAGGGACCCACATATCAACGGCGAGGCTCA CTTCAGCTGTGGCAGTTCTTGGTAGCTCTTCTCGATGACCCATCAAACTCCCACTTCATAGCATGGACTGGCCGAGGCA TGGAATTCAAGCTGATTGAGCCGGAGGAGGTGGCACGTCGCTGGGGGATTCAGAAAAATAGGCCAGCTATGAACTATGA TAAACTTAGCCGATCACTTCGCTATTATTATGAAAAGGGAATCATGCAAAAGGTTGCTGGAGAAAGATACGTCTACAAG TTCGTTTGTGACCCTGAAGCGCTTTTCTCCATGGCCTTTCCAGACAACCAGCGCCCCTTACTGAAGACTGACATGGAGC GCCACATCAATGAGGAGGACACTGTTCCCCTGTCCCACTTTGACGAGAGCATGGTCTACATGCAGGATAGTGGCTGCTG CAACACCCACCCATATAATGAAGGCTACGTCTATTAACAACAGTGACAGTAAAGGGGGTGTTTTCCCCTCTCTTANGCT TCTCCTCTTTCACAAAGAANCCAGAAGAAAGCTGAATCGACTTCAGTTTGTTTTTTAAATAGTACACTAAAAGGGGCTT TTCCTGTTGCATTATTCCTATGGTCTGCCATGGACAGCGCACTTTATTTGAAAGGGGAGGGTTGGAAACTAAACATTAT TGTGTGTAACAGGAGGAAAAGGGTGGGTTTGCTTTTTATTAAGTTTGGGAAGGGAACATACAGGTTTTAAGTACAAAAA AGCTATATCATGTCTGTTTTGTTTCATATCAACATAAGATATTGTACATTTTCTCTGGGTATCCGTAGTACAGTTAATT CTCATTGTGCAAAATAACCACTTGCTGATAATATCAGCACAGCATGCCTAGGGCAGTTGTTTCTTGCCATTCTTAATTG TCTTTCTGCAGATATAAAAGAGAAGCAAAGCGTATACTGCAGCATTTAATTTAGAAATTTGAAGTGGTGGACCTTGCAG CTTGCCTCCGAAAGCAAACAAATATCTCTAGAGTTTTACTTTGTTTGTTTGTTTGTTTGAAGGGCCTCAAAAAATAAAA TCCCACTTATTTACAGAGTAGTCTTAAGAACAAGGACTAAGTCACAAAATCCCTGACTTCAGACTGCAAGCTGCATGCT GTAACTGTTGCTATACATATATGGCCAGTGCTATCACTTGGACATTCCAAGATCCATNTGAGAGTAGTAATTACATGTG ATAGGCTGTCTGATGATCATGTCAGCATTAAATACGGGATCATGATCAGGACGGAGAAAACTTTCGTATCCTTCCTTTC CTTTGGTACATAAATAAGTTATTTAATCAATAGGAATTAACTGTACTAAGTCACATATCTAATTATGCTGTTTAGACAC AGCAAGCACTCCTTGAGAAAAATATCCAATACACTAAATAGGTACTTTAGTAATTTTTAGACATGGTACCCATTAATAT GCATTTAAACCTTTTACTGCTGTGTTATGTTGATAACATATATAAATACTAGATAATGCTAATGCTTCTGCTGCTGTCT TTGTCTGTAATATTCTCTTTGATGCTGAATTTACTATGACCATTTATAAGCAATGCTGTAACTACAGGTAGCATTTCAG GACAAAATAGATGACTTGAACCATTTATTGCTTAGAAAATAGCTTACGCCATAGCTGTGCTATAAGCAGCTTTTATGCG CATCCACAAATGACTAGTAAGCTTCAGCTTGCTGAGGAAAGCTCTGCAGAACCTTTTGTGATATTCGGTGGAACAGAGA GTAGACGAACTGTCAATACCATGAAGTCGCTGTATGACATTGTAGTGCTGGCACTGATGTTACCAATCAACTTGTTTTG GACACTAAATGTAAATGTGATCAG
Citation	Lunn JS, Fishwick KJ, Halley PA, Storey KG. A spatial and temporal map of FGF/Erk1/2 activity and response repertoires in the early chick embryo. Dev Biol. 2007 Feb 15;302(2):536-52. Epub 2006 Oct 14.
Copyright	Copyright © 2006 Elsevier Inc. All rights reserved.
Comments	Insufficient information in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_205510).

Stage

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Location (click to highlight)

Comments (click to highlight)

1-3

stage 1

4-6

stage 4

stage 5

stage 6

Hensen's Node
Primitive Streak

7-10

stage 8

stage 10

stage 10

Forebrain
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak

Precardiac Mesoderm

Data from NCBI Unigene EST Profile
Unigene ID: Gga.2999

Mouse

Emage	MGI:99254
Eurexpress	MGI:99254
MGI GXD	MGI:99254

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-070104-1

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