Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ETV1
ETS variant 1

Gene

Official Symbol	ETV1
Official Full Name	ETS variant 1
CGNC ID	8196
also known as	ER81, ETS translocation variant 1\|ets domain protein\|ets variant gene 1, ER81, ETV1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204917
Polypeptide	NP_990248
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.2999

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	2115	ENSG00000006468		MIM:600541
Mouse	14009	ENSMUSG00000004151	All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(4)	MGI:99254
Xenopus	394827, 398358			489878
Zebrafish	563876	ENSDARG00000055183	ZDB-GENE-070104-1	ZFIN:ZDB-GENE-070104-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395748
Ensembl Gene
KEGG	gga:395748

Entry 1

GEISHA Id	Er81.Lunn.2007	Data Source	Publication
Complete cDNA Template Probe	show CTGCTTCCGAGGGGGAAGTGCCGGGGAATAATTAATGTTTTTATTAAATTTGGAGGGAAATTTTTTGCAGCCGATCGCC GCGCGTGGCCTTCAGGCTGATTGGAGTCCAGATCCCGAGGAAATCTCCAGATCCAATGCCCACTAAATAAAACACTGAG CTCAGACTCGTGGAAGAGCCACAGGATGGATGGATTTTATGACCAGCAAGTGCCTTACATGGTCACCAATAATCCGCGT GGGAGAAACTGTAATGAGAGACCGACAAATGTCAGGAAAAGAAAATTCATTAACAGAGACCTGGCTCATGATTCAGAAG AACTCTTTCAAGATCTGAGCCAATTACAGGAGACATGGCTTGCAGAAGCTCAGGTACCTGACAATGACGAGCAGTTTGT GCCAGACTATCAGGCTGAAAGTTTGGCTTTTCATGGTCTCCCTGTGAAAATCAAGAAGGAACCCCATAGCCCATGTTCA GAACTTGGCTCTGCTTGTAGTCAAGAGCAACCATTCAAGTTCAGTTATGGGGAAAAGTGCCTGTACAATGTCAGTGCCT ATGATCAGAAGCCACAAGTGGGAATGAGGCCCTCCAACCCACCAACGCCATCCAGCACTCCTGTGTCACCACTGCACCA TGCCTCCCCAAACTCAGCTCAGACTCCTAAACCTGACCGGGTTTTCCCTGCCCATCTCCCTCCATCCCAATCCATTCAA GACAACAGCTTCCCTATGGACCACAGATTTCGCCGCCAGCTCTCTGAACCTTGCAATTCTTTTCCACCTTTGCCTGCAA TGCCGAGGGAAGGACGTCCAATATATCAGCGGCAGATGTCTGAGCCTAACATCCCCTTCCCGCCTCAAGGTTTTAAGCA GGAGTATCACGATCCAGTTTATGAACACAACGCCATGGTTGGCAGTGCAGCCAGTCAAAATTTCCCCCCTCCTCTGATG ATTAAACAGGAACCTAGAGATTTTGCATATGATTCAGAAGTGCCTAGCTGCCATTCCATTTACATGAGGCAAGAAGGCT TCCTGGCTCACCCAAACAGAACAGAAGGTTGTATGTATGAAAAGGGACCTAGGCAGTTTTATGATGACACTTGTGTTGT TCCAGAGAAGTTTGACGGTGATGTCAAACAGGAACCAGGCATGTACCGTGAGGGACCCACATATCAACGGCGAGGCTCA CTTCAGCTGTGGCAGTTCTTGGTAGCTCTTCTCGATGACCCATCAAACTCCCACTTCATAGCATGGACTGGCCGAGGCA TGGAATTCAAGCTGATTGAGCCGGAGGAGGTGGCACGTCGCTGGGGGATTCAGAAAAATAGGCCAGCTATGAACTATGA TAAACTTAGCCGATCACTTCGCTATTATTATGAAAAGGGAATCATGCAAAAGGTTGCTGGAGAAAGATACGTCTACAAG TTCGTTTGTGACCCTGAAGCGCTTTTCTCCATGGCCTTTCCAGACAACCAGCGCCCCTTACTGAAGACTGACATGGAGC GCCACATCAATGAGGAGGACACTGTTCCCCTGTCCCACTTTGACGAGAGCATGGTCTACATGCAGGATAGTGGCTGCTG CAACACCCACCCATATAATGAAGGCTACGTCTATTAACAACAGTGACAGTAAAGGGGGTGTTTTCCCCTCTCTTANGCT TCTCCTCTTTCACAAAGAANCCAGAAGAAAGCTGAATCGACTTCAGTTTGTTTTTTAAATAGTACACTAAAAGGGGCTT TTCCTGTTGCATTATTCCTATGGTCTGCCATGGACAGCGCACTTTATTTGAAAGGGGAGGGTTGGAAACTAAACATTAT TGTGTGTAACAGGAGGAAAAGGGTGGGTTTGCTTTTTATTAAGTTTGGGAAGGGAACATACAGGTTTTAAGTACAAAAA AGCTATATCATGTCTGTTTTGTTTCATATCAACATAAGATATTGTACATTTTCTCTGGGTATCCGTAGTACAGTTAATT CTCATTGTGCAAAATAACCACTTGCTGATAATATCAGCACAGCATGCCTAGGGCAGTTGTTTCTTGCCATTCTTAATTG TCTTTCTGCAGATATAAAAGAGAAGCAAAGCGTATACTGCAGCATTTAATTTAGAAATTTGAAGTGGTGGACCTTGCAG CTTGCCTCCGAAAGCAAACAAATATCTCTAGAGTTTTACTTTGTTTGTTTGTTTGTTTGAAGGGCCTCAAAAAATAAAA TCCCACTTATTTACAGAGTAGTCTTAAGAACAAGGACTAAGTCACAAAATCCCTGACTTCAGACTGCAAGCTGCATGCT GTAACTGTTGCTATACATATATGGCCAGTGCTATCACTTGGACATTCCAAGATCCATNTGAGAGTAGTAATTACATGTG ATAGGCTGTCTGATGATCATGTCAGCATTAAATACGGGATCATGATCAGGACGGAGAAAACTTTCGTATCCTTCCTTTC CTTTGGTACATAAATAAGTTATTTAATCAATAGGAATTAACTGTACTAAGTCACATATCTAATTATGCTGTTTAGACAC AGCAAGCACTCCTTGAGAAAAATATCCAATACACTAAATAGGTACTTTAGTAATTTTTAGACATGGTACCCATTAATAT GCATTTAAACCTTTTACTGCTGTGTTATGTTGATAACATATATAAATACTAGATAATGCTAATGCTTCTGCTGCTGTCT TTGTCTGTAATATTCTCTTTGATGCTGAATTTACTATGACCATTTATAAGCAATGCTGTAACTACAGGTAGCATTTCAG GACAAAATAGATGACTTGAACCATTTATTGCTTAGAAAATAGCTTACGCCATAGCTGTGCTATAAGCAGCTTTTATGCG CATCCACAAATGACTAGTAAGCTTCAGCTTGCTGAGGAAAGCTCTGCAGAACCTTTTGTGATATTCGGTGGAACAGAGA GTAGACGAACTGTCAATACCATGAAGTCGCTGTATGACATTGTAGTGCTGGCACTGATGTTACCAATCAACTTGTTTTG GACACTAAATGTAAATGTGATCAG
Citation	Lunn JS, Fishwick KJ, Halley PA, Storey KG. A spatial and temporal map of FGF/Erk1/2 activity and response repertoires in the early chick embryo. Dev Biol. 2007 Feb 15;302(2):536-52. Epub 2006 Oct 14.
Copyright	Copyright © 2006 Elsevier Inc. All rights reserved.
Comments	Insufficient information in publication to verify exact sequence used to synthesize probe. Sequence above was obtained from NCBI (acc #NM_204917.1).

Stage

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Location (click to highlight)

Comments (click to highlight)

1-3

stage 1

Unlabeled

4-6

stage 4

stage 5

stage 6

Hensen's Node
Primitive Streak

7-10

stage 8

stage 10

Forebrain
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak

Precardiac Mesoderm

Entry 2

GEISHA Id	ETV1.Anderson.2020	Data Source	Direct Submission
Complete cDNA Template Probe	show CTGCTTCCGAGGGGGAAGTGCCGGGGAATAATTAATGTTTTTATTAAATTTGGAGGGAAATTTTTTGCAGCCGATCGCC GCGCGTGGCCTTCAGGCTGATTGGAGTCCAGATCCCGAGGAAATCTCCAGATCCAATGCCCACTAAATAAAACACTGAG CTCAGACTCGTGGAAGAGCCACAGGATGGATGGATTTTATGACCAGCAAGTGCCTTACATGGTCACCAATAATCCGCGT GGGAGAAACTGTAATGAGAGACCGACAAATGTCAGGAAAAGAAAATTCATTAACAGAGACCTGGCTCATGATTCAGAAG AACTCTTTCAAGATCTGAGCCAATTACAGGAGACATGGCTTGCAGAAGCTCAGGTACCTGACAATGACGAGCAGTTTGT GCCAGACTATCAGGCTGAAAGTTTGGCTTTTCATGGTCTCCCTGTGAAAATCAAGAAGGAACCCCATAGCCCATGTTCA GAACTTGGCTCTGCTTGTAGTCAAGAGCAACCATTCAAGTTCAGTTATGGGGAAAAGTGCCTGTACAATGTCAGTGCCT ATGATCAGAAGCCACAAGTGGGAATGAGGCCCTCCAACCCACCAACGCCATCCAGCACTCCTGTGTCACCACTGCACCA TGCCTCCCCAAACTCAGCTCAGACTCCTAAACCTGACCGGGTTTTCCCTGCCCATCTCCCTCCATCCCAATCCATTCAA GACAACAGCTTCCCTATGGACCACAGATTTCGCCGCCAGCTCTCTGAACCTTGCAATTCTTTTCCACCTTTGCCTGCAA TGCCGAGGGAAGGACGTCCAATATATCAGCGGCAGATGTCTGAGCCTAACATCCCCTTCCCGCCTCAAGGTTTTAAGCA GGAGTATCACGATCCAGTTTATGAACACAACGCCATGGTTGGCAGTGCAGCCAGTCAAAATTTCCCCCCTCCTCTGATG ATTAAACAGGAACCTAGAGATTTTGCATATGATTCAGAAGTGCCTAGCTGCCATTCCATTTACATGAGGCAAGAAGGCT TCCTGGCTCACCCAAACAGAACAGAAGGTTGTATGTATGAAAAGGGACCTAGGCAGTTTTATGATGACACTTGTGTTGT TCCAGAGAAGTTTGACGGTGATGTCAAACAGGAACCAGGCATGTACCGTGAGGGACCCACATATCAACGGCGAGGCTCA CTTCAGCTGTGGCAGTTCTTGGTAGCTCTTCTCGATGACCCATCAAACTCCCACTTCATAGCATGGACTGGCCGAGGCA TGGAATTCAAGCTGATTGAGCCGGAGGAGGTGGCACGTCGCTGGGGGATTCAGAAAAATAGGCCAGCTATGAACTATGA TAAACTTAGCCGATCACTTCGCTATTATTATGAAAAGGGAATCATGCAAAAGGTTGCTGGAGAAAGATACGTCTACAAG TTCGTTTGTGACCCTGAAGCGCTTTTCTCCATGGCCTTTCCAGACAACCAGCGCCCCTTACTGAAGACTGACATGGAGC GCCACATCAATGAGGAGGACACTGTTCCCCTGTCCCACTTTGACGAGAGCATGGTCTACATGCAGGATAGTGGCTGCTG CAACACCCACCCATATAATGAAGGCTACGTCTATTAACAACAGTGACAGTAAAGGGGGTGTTTTCCCCTCTCTTANGCT TCTCCTCTTTCACAAAGAANCCAGAAGAAAGCTGAATCGACTTCAGTTTGTTTTTTAAATAGTACACTAAAAGGGGCTT TTCCTGTTGCATTATTCCTATGGTCTGCCATGGACAGCGCACTTTATTTGAAAGGGGAGGGTTGGAAACTAAACATTAT TGTGTGTAACAGGAGGAAAAGGGTGGGTTTGCTTTTTATTAAGTTTGGGAAGGGAACATACAGGTTTTAAGTACAAAAA AGCTATATCATGTCTGTTTTGTTTCATATCAACATAAGATATTGTACATTTTCTCTGGGTATCCGTAGTACAGTTAATT CTCATTGTGCAAAATAACCACTTGCTGATAATATCAGCACAGCATGCCTAGGGCAGTTGTTTCTTGCCATTCTTAATTG TCTTTCTGCAGATATAAAAGAGAAGCAAAGCGTATACTGCAGCATTTAATTTAGAAATTTGAAGTGGTGGACCTTGCAG CTTGCCTCCGAAAGCAAACAAATATCTCTAGAGTTTTACTTTGTTTGTTTGTTTGTTTGAAGGGCCTCAAAAAATAAAA TCCCACTTATTTACAGAGTAGTCTTAAGAACAAGGACTAAGTCACAAAATCCCTGACTTCAGACTGCAAGCTGCATGCT GTAACTGTTGCTATACATATATGGCCAGTGCTATCACTTGGACATTCCAAGATCCATNTGAGAGTAGTAATTACATGTG ATAGGCTGTCTGATGATCATGTCAGCATTAAATACGGGATCATGATCAGGACGGAGAAAACTTTCGTATCCTTCCTTTC CTTTGGTACATAAATAAGTTATTTAATCAATAGGAATTAACTGTACTAAGTCACATATCTAATTATGCTGTTTAGACAC AGCAAGCACTCCTTGAGAAAAATATCCAATACACTAAATAGGTACTTTAGTAATTTTTAGACATGGTACCCATTAATAT GCATTTAAACCTTTTACTGCTGTGTTATGTTGATAACATATATAAATACTAGATAATGCTAATGCTTCTGCTGCTGTCT TTGTCTGTAATATTCTCTTTGATGCTGAATTTACTATGACCATTTATAAGCAATGCTGTAACTACAGGTAGCATTTCAG GACAAAATAGATGACTTGAACCATTTATTGCTTAGAAAATAGCTTACGCCATAGCTGTGCTATAAGCAGCTTTTATGCG CATCCACAAATGACTAGTAAGCTTCAGCTTGCTGAGGAAAGCTCTGCAGAACCTTTTGTGATATTCGGTGGAACAGAGA GTAGACGAACTGTCAATACCATGAAGTCGCTGTATGACATTGTAGTGCTGGCACTGATGTTACCAATCAACTTGTTTTG GACACTAAATGTAAATGTGATCAGAAAAAAAAAAAAAAAAAAAAAA
Comments	Images provided by Claire Anderson.Probe sequence was obtained from NCBI Accession: NM_204917.1.

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

Dermomyotome
Ear/Otic Placode
Ectoderm
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Pharynx
Somites
extraembryonic ectoderm

section 1
section 2

Entry 3

GEISHA Id	ER81.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show CTGCTTCCGAGGGGGAAGTGCCGGGGAATAATTAATGTTTTTATTAAATTTGGAGGGAAATTTTTTGCAGCCGATCGCC GCGCGTGGCCTTCAGGCTGATTGGAGTCCAGATCCCGAGGAAATCTCCAGATCCAATGCCCACTAAATAAAACACTGAG CTCAGACTCGTGGAAGAGCCACAGGATGGATGGATTTTATGACCAGCAAGTGCCTTACATGGTCACCAATAATCCGCGT GGGAGAAACTGTAATGAGAGACCGACAAATGTCAGGAAAAGAAAATTCATTAACAGAGACCTGGCTCATGATTCAGAAG AACTCTTTCAAGATCTGAGCCAATTACAGGAGACATGGCTTGCAGAAGCTCAGGTACCTGACAATGACGAGCAGTTTGT GCCAGACTATCAGGCTGAAAGTTTGGCTTTTCATGGTCTCCCTGTGAAAATCAAGAAGGAACCCCATAGCCCATGTTCA GAACTTGGCTCTGCTTGTAGTCAAGAGCAACCATTCAAGTTCAGTTATGGGGAAAAGTGCCTGTACAATGTCAGTGCCT ATGATCAGAAGCCACAAGTGGGAATGAGGCCCTCCAACCCACCAACGCCATCCAGCACTCCTGTGTCACCACTGCACCA TGCCTCCCCAAACTCAGCTCAGACTCCTAAACCTGACCGGGTTTTCCCTGCCCATCTCCCTCCATCCCAATCCATTCAA GACAACAGCTTCCCTATGGACCACAGATTTCGCCGCCAGCTCTCTGAACCTTGCAATTCTTTTCCACCTTTGCCTGCAA TGCCGAGGGAAGGACGTCCAATATATCAGCGGCAGATGTCTGAGCCTAACATCCCCTTCCCGCCTCAAGGTTTTAAGCA GGAGTATCACGATCCAGTTTATGAACACAACGCCATGGTTGGCAGTGCAGCCAGTCAAAATTTCCCCCCTCCTCTGATG ATTAAACAGGAACCTAGAGATTTTGCATATGATTCAGAAGTGCCTAGCTGCCATTCCATTTACATGAGGCAAGAAGGCT TCCTGGCTCACCCAAACAGAACAGAAGGTTGTATGTATGAAAAGGGACCTAGGCAGTTTTATGATGACACTTGTGTTGT TCCAGAGAAGTTTGACGGTGATGTCAAACAGGAACCAGGCATGTACCGTGAGGGACCCACATATCAACGGCGAGGCTCA CTTCAGCTGTGGCAGTTCTTGGTAGCTCTTCTCGATGACCCATCAAACTCCCACTTCATAGCATGGACTGGCCGAGGCA TGGAATTCAAGCTGATTGAGCCGGAGGAGGTGGCACGTCGCTGGGGGATTCAGAAAAATAGGCCAGCTATGAACTATGA TAAACTTAGCCGATCACTTCGCTATTATTATGAAAAGGGAATCATGCAAAAGGTTGCTGGAGAAAGATACGTCTACAAG TTCGTTTGTGACCCTGAAGCGCTTTTCTCCATGGCCTTTCCAGACAACCAGCGCCCCTTACTGAAGACTGACATGGAGC GCCACATCAATGAGGAGGACACTGTTCCCCTGTCCCACTTTGACGAGAGCATGGTCTACATGCAGGATAGTGGCTGCTG CAACACCCACCCATATAATGAAGGCTACGTCTATTAACAACAGTGACAGTAAAGGGGGTGTTTTCCCCTCTCTTANGCT TCTCCTCTTTCACAAAGAANCCAGAAGAAAGCTGAATCGACTTCAGTTTGTTTTTTAAATAGTACACTAAAAGGGGCTT TTCCTGTTGCATTATTCCTATGGTCTGCCATGGACAGCGCACTTTATTTGAAAGGGGAGGGTTGGAAACTAAACATTAT TGTGTGTAACAGGAGGAAAAGGGTGGGTTTGCTTTTTATTAAGTTTGGGAAGGGAACATACAGGTTTTAAGTACAAAAA AGCTATATCATGTCTGTTTTGTTTCATATCAACATAAGATATTGTACATTTTCTCTGGGTATCCGTAGTACAGTTAATT CTCATTGTGCAAAATAACCACTTGCTGATAATATCAGCACAGCATGCCTAGGGCAGTTGTTTCTTGCCATTCTTAATTG TCTTTCTGCAGATATAAAAGAGAAGCAAAGCGTATACTGCAGCATTTAATTTAGAAATTTGAAGTGGTGGACCTTGCAG CTTGCCTCCGAAAGCAAACAAATATCTCTAGAGTTTTACTTTGTTTGTTTGTTTGTTTGAAGGGCCTCAAAAAATAAAA TCCCACTTATTTACAGAGTAGTCTTAAGAACAAGGACTAAGTCACAAAATCCCTGACTTCAGACTGCAAGCTGCATGCT GTAACTGTTGCTATACATATATGGCCAGTGCTATCACTTGGACATTCCAAGATCCATNTGAGAGTAGTAATTACATGTG ATAGGCTGTCTGATGATCATGTCAGCATTAAATACGGGATCATGATCAGGACGGAGAAAACTTTCGTATCCTTCCTTTC CTTTGGTACATAAATAAGTTATTTAATCAATAGGAATTAACTGTACTAAGTCACATATCTAATTATGCTGTTTAGACAC AGCAAGCACTCCTTGAGAAAAATATCCAATACACTAAATAGGTACTTTAGTAATTTTTAGACATGGTACCCATTAATAT GCATTTAAACCTTTTACTGCTGTGTTATGTTGATAACATATATAAATACTAGATAATGCTAATGCTTCTGCTGCTGTCT TTGTCTGTAATATTCTCTTTGATGCTGAATTTACTATGACCATTTATAAGCAATGCTGTAACTACAGGTAGCATTTCAG GACAAAATAGATGACTTGAACCATTTATTGCTTAGAAAATAGCTTACGCCATAGCTGTGCTATAAGCAGCTTTTATGCG CATCCACAAATGACTAGTAAGCTTCAGCTTGCTGAGGAAAGCTCTGCAGAACCTTTTGTGATATTCGGTGGAACAGAGA GTAGACGAACTGTCAATACCATGAAGTCGCTGTATGACATTGTAGTGCTGGCACTGATGTTACCAATCAACTTGTTTTG GACACTAAATGTAAATGTGATCAGAAAAAAAAAAAAAAAAAAAAAA
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204917.1).