GEISHA - A Chicken Embryo Gene Expression Database
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EN2
engrailed homeobox 2

Gene
Official SymbolEN2
Official Full Nameengrailed homeobox 2
CGNC ID63707
also known asEn-2, Gg-En-2, homeobox protein engrailed-2|engrailed protein|homeobox protein en-2
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001267719
PolypeptideNP_001254648
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.56328
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Functionsequence-specific DNA binding transcription factor activity, more...transcription regulatory region sequence-specific DNA binding
Biological Processaxon guidance, hindbrain development, midbrain development, positive regulation of phosphorylation, more...positive regulation of transcription from RNA polymerase II promoter, positive regulation of translation
Cellular Componentfilopodium, growth cone, lamellipodium, neuron projection, nucleus
Links to other databases
Entrez Gene100859435
Ensembl GeneENSGALG00000023430
KEGGgga:100859435

Entry 1

GEISHA IdEn1.Ahmed.2006Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCGAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGGAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGGTGAGAGGAAGACGCGCGCCGAAGCCGCGCCGCAAACTTTCAGCCCCCGTTCGTAACGCG
CTCGGCGAGGGGACGGCGGTGCCCGACCCAAAGAGGGGAAAAGCGGCTCTCGGAGACGTCCGCCGTAACTTAGAGCCGA
GCGCCGGGGCGGCAGGAAGGCGCCGGGACTGCGCGCCCGGCACGGGATCCGCTGCGCTCCTCCGCTGTGCTCCGGGGAT
CCCGGGAGCCGCTCTGCGGGGCCGCTCCGGGTGCTGCGAGAGAGTGGTCAGAGGCGCGTCTCCGGCTCGAGAGACGGGC
ACTCGAGTTTCCCTCCTCATACTTATCATTCCCTCTCCGGGTTCGGGGAGGTATCCGCACGCCGTGCCCCGATCCCCGC
CGCTCGGCTCGGCGCGGCCGCTCTCTTTCGCCGGGTCGGGGCGCTCCGAGCGCTGCGCGGTGCCGGGATCAGACCGCTC
CCGCTGCGGGGAAGGGAACGGCCGCGTCGGGAGAGCGGCTCCGGCCTACAGCGAGGCCTCGGAGGCGGCGGCGGGCGAG
GGAGTTCCGCGGCCTCGTCCCTCCGGGGCCCGCTCTCCCCGGGCCGGGTCCCCTCCGTCGGGCCACGTTCCGTCGGGGC
GGGCGGCGGCGGGGCCCAGCGCAGCGGTGTGTGTTGCCCTGCCCGCAGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAA
GACGGAGAAGGAGGACAAACGGCCGCGCACCGCCTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCG
AACCGCTACATCACGGAGCAGCGGCGGCAGAGCCTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGT
TCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACT
GTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGTGA
CitationAhmed MU, Cheng L, Dietrich S. Establishment of the epaxial-hypaxial boundary in the avian myotome. Dev Dyn. 2006 Jul;235(7):1884-94.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsInsufficient information provided to verify exact probe sequence. Probe sequence obtained from NCBI (accession # XM_001234328)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
stage 22
stage 24
Dermatome
Myotome
Dermomyotome not in vocab.
Dermomyotome not in vocabulary.
dermomyotome not included in vocab.
25
stage 25
Dermatome
Myotome
Dermomyotome not in vocab.

Entry 2

GEISHA IdEN1.Bothe.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCGAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGGAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGGTGAGAGGAAGACGCGCGCCGAAGCCGCGCCGCAAACTTTCAGCCCCCGTTCGTAACGCG
CTCGGCGAGGGGACGGCGGTGCCCGACCCAAAGAGGGGAAAAGCGGCTCTCGGAGACGTCCGCCGTAACTTAGAGCCGA
GCGCCGGGGCGGCAGGAAGGCGCCGGGACTGCGCGCCCGGCACGGGATCCGCTGCGCTCCTCCGCTGTGCTCCGGGGAT
CCCGGGAGCCGCTCTGCGGGGCCGCTCCGGGTGCTGCGAGAGAGTGGTCAGAGGCGCGTCTCCGGCTCGAGAGACGGGC
ACTCGAGTTTCCCTCCTCATACTTATCATTCCCTCTCCGGGTTCGGGGAGGTATCCGCACGCCGTGCCCCGATCCCCGC
CGCTCGGCTCGGCGCGGCCGCTCTCTTTCGCCGGGTCGGGGCGCTCCGAGCGCTGCGCGGTGCCGGGATCAGACCGCTC
CCGCTGCGGGGAAGGGAACGGCCGCGTCGGGAGAGCGGCTCCGGCCTACAGCGAGGCCTCGGAGGCGGCGGCGGGCGAG
GGAGTTCCGCGGCCTCGTCCCTCCGGGGCCCGCTCTCCCCGGGCCGGGTCCCCTCCGTCGGGCCACGTTCCGTCGGGGC
GGGCGGCGGCGGGGCCCAGCGCAGCGGTGTGTGTTGCCCTGCCCGCAGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAA
GACGGAGAAGGAGGACAAACGGCCGCGCACCGCCTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCG
AACCGCTACATCACGGAGCAGCGGCGGCAGAGCCTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGT
TCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACT
GTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGTGA
CitationBothe I, Ahmed MU, Winterbottom FL, von Scheven G, Dietrich S. Extrinsic versus intrinsic cues in avian paraxial mesoderm patterning and differentiation. Dev Dyn. 2007 Sep;236(9):2397-409.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_001234328).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
stage 24
Dermatome
Dermomyotome
Myotome
Somites
 

Entry 3

GEISHA IdEn2.Abe.2006Data SourcePublication
Forward cDNA Template Probeshow
GGATCCCTCCTCCTTCTCCTCCTCCCCCCACCCCGACGGCGGCCGCATATTTTTTTATACATATTTTTAACCCCCATTA
TTTTTAATTGTTTGTTTTATTTACTGCGACGGGGGCGGCGGATGAAGCGCGGCGGCGGCGGCCGCGGGACGCGGCGAGC
GGCGGCGGCGGCGGCGGCGACGGGAGGAGCGGAGCGGAGCGCTCATTTTTGCAAAGTTGGAACTCGTGGAGCTTCGGCT
GCTGCCTTCTGCGTCTCCGTGGCGTTATTTCAAAACGACCGTAATTAATTACGATTTTTGTTTTGTTCGATTTGATTTT
TTAAATTTTTTTTTTTTTTTTTTTTTGGACGAACTCTGGATTTTGAATGCCGGGCGCGGCCAGAAGAAGCGCAAACCAA
TAGACACCTGTGCGTGTGTATATAGAAAAATATATATATATCGATCTATATATTAAAAAAAAAAAAATTAAAATAAGGA
CCGAACGACCGCGGCAGCCGCCCCCAGGCAGCGCCCGGCGGGGCGGGCAGGAGCCGCTGCGGGGCCGCGCACGATGGAG
GAGGGCGGCCGCAGCCCCCGGGAGGAGGCGGCCGAACCGCAGGAGTCCGGCGGGGACGCGGAACCCGGCGGAGGGCGTC
GGGCTCTGCTGCTGCCCCCCGGCGACCCCCCGCACCCCCACCCGCACCCTCACCGCATCACCAACTTCTTCATCGACAA
CATCCTGAGGCCCGAGTTCGGTCGGAGGAAGGAAGCGGGAGGAACCGCCGGAGAACCCCGCAGGCCCGGAGCGGAGAGC
AGGAGGAGCCCCGCGGCCGCCGCGCCCGCTCCCGGAGCTCCGGTGCCCGGCGGAGGAGGCGGCGGCGGGGGTGGATCGC
CGGGCCGAGGGGAGGGCGGCCCCGCCGCTCTGGCCCTGCACGGAGCGGCCAAGAAGGGGGGAGACCCCGCGGCGCTGGA
GGCGGCCCTGAAAGCGCGGGGGCTGAGCGGCGCGGAGCTGTCGGTGAGCTCGGACTCGGATAGCTCCCAGGCCGGCTCC
AACGCCGGGAACCAACCCATGCTTTGGCCCGCTTGGGTGTACTGCACGCGGTACTCGGACCGACCGTCTTCAGGTCCCC
GCTCCCGCAAACCAAAGAAGAAGAACCCCAACAAGGAAGACAAGCGGCCCCGCACCGCCTTCACGGCCGAGCAGCTGCA
GAGACTCAAGGCCGAGTTCCAGACGAACCGCTACCTGACGGAGCAGCGCAGGCAGAGCCTGGCCCAGGAGCTCGGCCTC
AACGAGTCCCAGATCAAGATCTGGTTCCAGAACAAGAGAGCCAAGATCAAGAAGGCGACGGGCAGCAAGAACTCGCTGG
CGGTGCACCTCATGGCCCAGGGGCTCTACAACCACTCCACCACGGCGAAAGACGGCAAGTCGGACAGCGAATAG
CitationAbe Y, Chen W, Huang W, Nishino M, Li YP. CNBP regulates forebrain formation at organogenesis stage in chick embryos. Dev Biol. 2006 Jul 1;295(1):116-27. Epub 2006 Apr 19.
CopyrightReprinted from Developmental Biology, 295, Yoko Abea, Wei Chena, Wei Huangc, Mizuho Nishinod and Yi-Ping Li, CNBP regulates forebrain formation at organogenesis stage in chick embryos, 116-127, Copyright 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #AH002760)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19
stage 19
Hindbrain
Isthmus/MHB
Midbrain
 

Entry 4

GEISHA Iden-1.Ha.2003Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCGAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGGAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGGTGAGAGGAAGACGCGCGCCGAAGCCGCGCCGCAAACTTTCAGCCCCCGTTCGTAACGCG
CTCGGCGAGGGGACGGCGGTGCCCGACCCAAAGAGGGGAAAAGCGGCTCTCGGAGACGTCCGCCGTAACTTAGAGCCGA
GCGCCGGGGCGGCAGGAAGGCGCCGGGACTGCGCGCCCGGCACGGGATCCGCTGCGCTCCTCCGCTGTGCTCCGGGGAT
CCCGGGAGCCGCTCTGCGGGGCCGCTCCGGGTGCTGCGAGAGAGTGGTCAGAGGCGCGTCTCCGGCTCGAGAGACGGGC
ACTCGAGTTTCCCTCCTCATACTTATCATTCCCTCTCCGGGTTCGGGGAGGTATCCGCACGCCGTGCCCCGATCCCCGC
CGCTCGGCTCGGCGCGGCCGCTCTCTTTCGCCGGGTCGGGGCGCTCCGAGCGCTGCGCGGTGCCGGGATCAGACCGCTC
CCGCTGCGGGGAAGGGAACGGCCGCGTCGGGAGAGCGGCTCCGGCCTACAGCGAGGCCTCGGAGGCGGCGGCGGGCGAG
GGAGTTCCGCGGCCTCGTCCCTCCGGGGCCCGCTCTCCCCGGGCCGGGTCCCCTCCGTCGGGCCACGTTCCGTCGGGGC
GGGCGGCGGCGGGGCCCAGCGCAGCGGTGTGTGTTGCCCTGCCCGCAGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAA
GACGGAGAAGGAGGACAAACGGCCGCGCACCGCCTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCG
AACCGCTACATCACGGAGCAGCGGCGGCAGAGCCTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGT
TCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACT
GTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGTGA
CitationHa AS, Riddle RD. cBlimp-1 expression in chick limb bud development. Gene Expr Patterns. 2003 Jun;3(3):297-300.
CopyrightReprinted from Gene Expr Patterns, Volume 3, Issue 3, Alice S. Ha and Robert D. Riddle, cBlimp-1 expression in chick limb bud development, Pages 297-300, Copyright 2003, with permission from Elsevier. Copyright © 2003 Elsevier Science B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #XM_001234328).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
stage 18
stage 18
Leg
Leg Ectoderm
Wing Ectoderm
ventral ectoderm

Entry 5

GEISHA IdEn1.Cheng.2004Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCGAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGGAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGGTGAGAGGAAGACGCGCGCCGAAGCCGCGCCGCAAACTTTCAGCCCCCGTTCGTAACGCG
CTCGGCGAGGGGACGGCGGTGCCCGACCCAAAGAGGGGAAAAGCGGCTCTCGGAGACGTCCGCCGTAACTTAGAGCCGA
GCGCCGGGGCGGCAGGAAGGCGCCGGGACTGCGCGCCCGGCACGGGATCCGCTGCGCTCCTCCGCTGTGCTCCGGGGAT
CCCGGGAGCCGCTCTGCGGGGCCGCTCCGGGTGCTGCGAGAGAGTGGTCAGAGGCGCGTCTCCGGCTCGAGAGACGGGC
ACTCGAGTTTCCCTCCTCATACTTATCATTCCCTCTCCGGGTTCGGGGAGGTATCCGCACGCCGTGCCCCGATCCCCGC
CGCTCGGCTCGGCGCGGCCGCTCTCTTTCGCCGGGTCGGGGCGCTCCGAGCGCTGCGCGGTGCCGGGATCAGACCGCTC
CCGCTGCGGGGAAGGGAACGGCCGCGTCGGGAGAGCGGCTCCGGCCTACAGCGAGGCCTCGGAGGCGGCGGCGGGCGAG
GGAGTTCCGCGGCCTCGTCCCTCCGGGGCCCGCTCTCCCCGGGCCGGGTCCCCTCCGTCGGGCCACGTTCCGTCGGGGC
GGGCGGCGGCGGGGCCCAGCGCAGCGGTGTGTGTTGCCCTGCCCGCAGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAA
GACGGAGAAGGAGGACAAACGGCCGCGCACCGCCTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCG
AACCGCTACATCACGGAGCAGCGGCGGCAGAGCCTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGT
TCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACT
GTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGTGA
CitationCheng L, Alvares LE, Ahmed MU, El-Hanfy AS, Dietrich S. The epaxial-hypaxial subdivision of the avian somite. Dev Biol. 2004 Oct 15;274(2):348-69.
CopyrightReprinted from Developmental Biology, Volume 274, Issue 2, Louise Cheng, Lúcia E. Alvares, Mohi U. Ahmend, Amira S. El-Hanfy, and Susanne Dietrich, The epaxial-hypaxial subdivision of the avian somite, Pages 348-369, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsAuthors indicate probe is that used by Logan et al., 1992. As information provided is insufficient to verify exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (Acc# XM_001234328.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-20
stage 20
 comparison of several genes

Entry 6

GEISHA IdEN1.Agarwala.2005Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCGAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGGAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGGTGAGAGGAAGACGCGCGCCGAAGCCGCGCCGCAAACTTTCAGCCCCCGTTCGTAACGCG
CTCGGCGAGGGGACGGCGGTGCCCGACCCAAAGAGGGGAAAAGCGGCTCTCGGAGACGTCCGCCGTAACTTAGAGCCGA
GCGCCGGGGCGGCAGGAAGGCGCCGGGACTGCGCGCCCGGCACGGGATCCGCTGCGCTCCTCCGCTGTGCTCCGGGGAT
CCCGGGAGCCGCTCTGCGGGGCCGCTCCGGGTGCTGCGAGAGAGTGGTCAGAGGCGCGTCTCCGGCTCGAGAGACGGGC
ACTCGAGTTTCCCTCCTCATACTTATCATTCCCTCTCCGGGTTCGGGGAGGTATCCGCACGCCGTGCCCCGATCCCCGC
CGCTCGGCTCGGCGCGGCCGCTCTCTTTCGCCGGGTCGGGGCGCTCCGAGCGCTGCGCGGTGCCGGGATCAGACCGCTC
CCGCTGCGGGGAAGGGAACGGCCGCGTCGGGAGAGCGGCTCCGGCCTACAGCGAGGCCTCGGAGGCGGCGGCGGGCGAG
GGAGTTCCGCGGCCTCGTCCCTCCGGGGCCCGCTCTCCCCGGGCCGGGTCCCCTCCGTCGGGCCACGTTCCGTCGGGGC
GGGCGGCGGCGGGGCCCAGCGCAGCGGTGTGTGTTGCCCTGCCCGCAGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAA
GACGGAGAAGGAGGACAAACGGCCGCGCACCGCCTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCG
AACCGCTACATCACGGAGCAGCGGCGGCAGAGCCTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGT
TCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACT
GTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGTGA
CitationAgarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_001234328).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-26
stage 26
Spinal Cord
V1 interneurons

Entry 7

GEISHA IdEN1.Chambers.2006Data SourcePublication
Complete cDNA Template Probeshow
ATGGGTCGTCTCCCACCCCCGGGGCACGGAGCCCCTAAGGCAGCACCCGGGGCACGGAGGCGGCGGGGAGCATCTTCCG
ATGACGGCGCGACTCGGGCAAACTTCCCACGCCGGTGGCAGGGAGCCCCGCGCAGCCCCGCGGGTCGCGGTCCCGCGTG
CGCCCCTACGGTGGGAGAAGAGCCCGGGGCCGCTCCCAGCCTCGAGGTGCCCCCGCCCGCGGGGCCCCGTCCCGGAGAG
CGGCGGGGAGGGCGGAGGCCGGGAGGCGGCAGGCGTCGGCCCTTTGCGAAAGTATCCCCGCAGCCTTCCTTCCCCCCGA
GCGGACGCGAGAGCGGAGAGCCGGGGAGGGAGAGAGCGGGAGGACGCGGAAAACGCGGTGGAAGACGGCCGCGGGTGCG
AGGCTGTCGCTGGGGAAGGGTGAGAGGAAGACGCGCGCCGAAGCCGCGCCGCAAACTTTCAGCCCCCGTTCGTAACGCG
CTCGGCGAGGGGACGGCGGTGCCCGACCCAAAGAGGGGAAAAGCGGCTCTCGGAGACGTCCGCCGTAACTTAGAGCCGA
GCGCCGGGGCGGCAGGAAGGCGCCGGGACTGCGCGCCCGGCACGGGATCCGCTGCGCTCCTCCGCTGTGCTCCGGGGAT
CCCGGGAGCCGCTCTGCGGGGCCGCTCCGGGTGCTGCGAGAGAGTGGTCAGAGGCGCGTCTCCGGCTCGAGAGACGGGC
ACTCGAGTTTCCCTCCTCATACTTATCATTCCCTCTCCGGGTTCGGGGAGGTATCCGCACGCCGTGCCCCGATCCCCGC
CGCTCGGCTCGGCGCGGCCGCTCTCTTTCGCCGGGTCGGGGCGCTCCGAGCGCTGCGCGGTGCCGGGATCAGACCGCTC
CCGCTGCGGGGAAGGGAACGGCCGCGTCGGGAGAGCGGCTCCGGCCTACAGCGAGGCCTCGGAGGCGGCGGCGGGCGAG
GGAGTTCCGCGGCCTCGTCCCTCCGGGGCCCGCTCTCCCCGGGCCGGGTCCCCTCCGTCGGGCCACGTTCCGTCGGGGC
GGGCGGCGGCGGGGCCCAGCGCAGCGGTGTGTGTTGCCCTGCCCGCAGGCCCCCGCACCAGGAAGCTGAAGAAGAAGAA
GACGGAGAAGGAGGACAAACGGCCGCGCACCGCCTTCACGGCCGAGCAGCTGCAGCGGCTGAAGGCGGAGTTCCAGGCG
AACCGCTACATCACGGAGCAGCGGCGGCAGAGCCTGGCCCAGGAGCTGAGCCTCAACGAGTCCCAGATCAAGATCTGGT
TCCAGAACAAGCGGGCCAAGATCAAGAAGGCGACGGGCATCAAGAACGGGCTGGCGCTGCACCTCATGGCCCAGGGACT
GTACAACCACTCCACCACCACGGTGCAGGACAAAGAGGAGAGCGAGTGA
CitationChambers, D, Mason, I, A high throughput messenger RNA differential display screen identifies discrete domains of gene expression and novel patterning processes along the developing neural tube. BMC Dev Biol. 2006; 6: 9. Published online 2006 February 24.
CopyrightCopyright © 2006 Chambers and Mason; licensee BioMed Central Ltd.This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_001234328.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Isthmus/MHB
Midbrain
Provided for reference.
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.56328

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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