GEISHA - A Chicken Embryo Gene Expression Database
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KERA
keratocan

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolKERA
Official Full Namekeratocan
CGNC ID48995
also known askeratocan|KTN|keratan sulfate proteoglycan keratocan
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204176
PolypeptideNP_989507
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4837
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human11081ENSG00000139330MIM:217300MIM:603288
Mouse16545ENSMUSG00000019932All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:1202398
Xenopus1004867961012701
Zebrafish567017ZDB-GENE-041210-165ZFIN:ZDB-GENE-041210-165
Gene Ontology
Molecular Function
Biological Processcornea development in camera-type eye
Cellular Componentproteinaceous extracellular matrix
Links to other databases
Entrez Gene373995
Ensembl GeneENSGALG00000011270
KEGGgga:373995

Entry 1

GEISHA IdKERA.Conrad.2009Data SourcePublication
Complete cDNA Template Probeshow
CATTCTGTGTGGACTCGAACTGTGAGACAAGTTTATAATGAGCTGGATCCTGAGCATTGGTCTCACTACACTTTTGAGT
GTCCACAAGAGTGTTTTTGCCCTCCTAGTTTCCCCAATGCATTATACTGTGATAACAAAGGACTTAAAGAAATACCTGC
AATCCCAGCAAGAATTTGGTACCTCTATCTTCAAAACAACCTGATTGAAACAATTTCAGAGAAGCCTTTTGTTAATGCC
ACTCATTTGAGATGGATAAATCTGAACAAGAATAAAATCACCAACAATGGAATTGAGAGTGGTGTGCTCAGCAAGCTGA
AAAGGCTGTTGTACTTATTCCTTGAAGATAATGAGTTGGAAGAGGTGCCAGCTCCATTACCGGTGGGCTTGGAACAGCT
AAGGCTGGCTAGAAACAAAATCTCCAGAATCCCAGAAGGAGTCTTCAGCAATTTGGAAAATCTCACTATGTTAGATCTG
CACCAGAATAATTTGTTGGACAGCGCTCTTCAAAGTGACACCTTCCAAGGACTCAACAGTCTTATGCAACTCAACATAG
CGAAAAATTCCCTCAAAAAGATGCCTTTAAGCATTCCAGCTAACACACTGCAGCTGTTTTTAGACAACAACTCCATTGA
AGTCATACCAGAAAACTACTTCAGTGCAATACCCAAAGTGACTTTCCTTAGGCTGAACTACAATAAATTATCTGATGAT
GGCATTCCCCCAAATGGGTTTAATGTTTCATCTATTCTAGACCTACAGCTGTCTCATAACCAGCTCACTAAAATTCCAC
CGATCAATGCTCATCTCGAGCACCTTCACCTTGATCACA
CitationConrad AH, Albrecht M, Pettit-Scott M, Conrad GW. Embryonic corneal Schwann cells express some Schwann cell marker mRNAs, but no mature Schwann cell marker proteins.Invest Ophthalmol Vis Sci. 2009 Sep;50(9):4173-84. Epub 2009 Apr 22.
CopyrightInformation that is created by or for the US government on this site is within the public domain. Public domain information on the National Library of Medicine (NLM) Web pages may be freely distributed and copied. However, it is requested that in any subsequent use of this work, NLM be given appropriate acknowledgment.
CommentsThe probe for KERA was amplified by PCR using the following primers: forward primer: 5;-AGTCCATTCTGTGTGGACTCG reverse primer: 5;-TGTGATCAAGGTGAAGGTGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-40
stage 40
stage 40
stage 40
stage 40
Eye
 

Entry 2

GEISHA IdKERA.Chakravarti.2006Data SourcePublication
Complete cDNA Template Probeshow
AGTCCATTCTGTGTGGACTCGAACTGTGAGACAAGTTTATAATGAGCTGGATCCTGAGCATTGGTCTCACTACACTTTT
GAGTGTCCACAAGAGTGTTTTTGCCCTCCTAGTTTCCCCAATGCATTATACTGTGATAACAAAGGACTTAAAGAAATAC
CTGCAATCCCAGCAAGAATTTGGTACCTCTATCTTCAAAACAACCTGATTGAAACAATTTCAGAGAAGCCTTTTGTTAA
TGCCACTCATTTGAGATGGATAAATCTGAACAAGAATAAAATCACCAACAATGGAATTGAGAGTGGTGTGCTCAGCAAG
CTGAAAAGGCTGTTGTACTTATTCCTTGAAGATAATGAGTTGGAAGAGGTGCCAGCTCCATTACCGGTGGGCTTGGAAC
AGCTAAGGCTGGCTAGAAACAAAATCTCCAGAATCCCAGAAGGAGTCTTCAGCAATTTGGAAAATCTCACTATGTTAGA
TCTGCACCAGAATAATTTGTTGGACAGCGCTCTTCAAAGTGACACCTTCCAAGGACTCAACAGTCTTATGCAACTCAAC
ATAGCGAAAAATTCCCTCAAAAAGATGCCTTTAAGCATTCCAGCTAACACACTGCAGCTGTTTTTAGACAACAACTCCA
TTGAAGTCATACCAGAAAACTACTTCAGTGCAATACCCAAAGTGACTTTCCTTAGGCTGAACTACAATAAATTATCTGA
TGATGGCATTCCCCCAAATGGGTTTAATGTTTCATCTATTCTAGACCTACAGCTGTCTCATAACCAGCTCACTAAAATT
CCACCGATCAATGCTCATCTCGAGCACCTTCACCTTGATCACA
CitationChakravarti S. Focus on molecules: keratocan (KERA). Exp Eye Res. 2006 Feb;82(2):183-4.
CopyrightCopyright © 2005 Elsevier Ltd.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Chakravarti et al. 2006.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
Neural Plate/Tube
Stage 8 embryo and not a stage HH 25 embryo
13-18
stage 17
Widespread Expression
 
19-24
stage 20
Widespread Expression
 
25
stage 25
Eye
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4837

Mouse

EmageMGI:1202398
EurexpressMGI:1202398
MGI GXDMGI:1202398

Frog

Xenbase1012701

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041210-165
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