Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CDH5
cadherin 5

Gene

Official Symbol	CDH5
Official Full Name	cadherin 5
CGNC ID	3922
also known as	cadherin-5, cadherin-5\|cadherin 5, type 2 (vascular endothelium)\|cadherin 5, type 2, VE-cadherin (vascular endothelium)\|cadherin 5, type 2, VE-cadherin (vascular epithelium), VE-Cadherin , cadherin 5, type 2, vascular endothelium cadherin
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_204227
Polypeptide	NP_989558

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	1003	ENSG00000179776		MIM:601120
Mouse	12562	ENSMUSG00000031871	All phenotypic alleles (4):Targeted, knock-out(4)	MGI:105057
Xenopus	100488458			480936
Zebrafish	100334983, 445471	ENSDARG00000075549	ZDB-GENE-040816-1	ZFIN:ZDB-GENE-040816-1

Gene Ontology

Molecular Function	calcium ion binding
Biological Process	cardiac epithelial to mesenchymal transition, homophilic cell adhesion
Cellular Component	cell junction, integral component of membrane, plasma membrane

Links to other databases

Entrez Gene	374068
Ensembl Gene	ENSGALG00000005272
KEGG	gga:374068

Entry 1

GEISHA Id	CDH5.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GCTATGATGTGTCCGTGCTCAAC
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGCCTTCTTTCCTCTGCTGGGTAAG	cDNA Template Length	869
Forward cDNA Template Probe	show CATAAGCGCGCAGNTATCAATAAAGATGGTTACTGTCAGGGCCAGGCAGGCTGGAGATGCAGGAGGTTATAAAAACATT CTTTCCCACTGCCACCAAACCTGGTGGTGTTCCAGCGGGTCATCCTGAGCGCATGCTGATGAAAGCAGCACAGGATGAG AGGAATGAAGGACAAACCAGAGACAATACCACAACACTTTATAAGGAGAAGGATCTATCGAGACAGGGAGAGGAATCAT GTCCTAGGAGACTCTGGGTCCCCAAGCAGCAATTTTGAGGAAAGAACAGAACATTGGCAAGAAGAGCAGTGCCAGGGAA GCCAGTACTTTATTTGTATGGTTTGTTTTATCTCTACTGCTATCAGGTTTTCTTGTGTCTGTTTGAAATCCTACTACTG CCTGGGTGAAGAGCTGTGAATCTTTCCATGGCCATTGGCAGGCTCTTGATACCTATCTGTAGTGGAAGGAAGAAAATTT ATGGCTAATGTGAACTTAATACACAAAATCTTCATTTGGTTCTGATCCATACAGCTCAGCTAACATTTTAAACCTGGGT CCCCAGTCATTTAGGAAGTCATAATCGATATCTGAGTCTGAGGAGCCTGATTCCAAAGAACTGAGAGATTCTGCAATGG ACTCGGCCCCTTCGTAGCCATAAATGTGAAGCGTGTCATATGGCAGCAGATCCCTGTCATTGTCAGCTTCGTCCTTCTT AACCTCGATCATCATTTCCATTTCTCCAGCACCAGAAGTTGTATTTCCAGGAGGCTTTTGGACCTGTGCATATGCAGAA GGCACCACTTCTGGCTTTATACCATTCTTGCGCACGGAGTTGAGCACGGAC

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 6

Blood Islands

7-12

stage 8

stage 9

stage 10

Blood Islands
Blood Vessels
Extraembryonic Blood Vessels

13-18

stage 14

stage 16

stage 17

Blood Vessels
Extraembryonic Blood Vessels
Heart

19-24

stage 20

stage 22

Aorta
Blood Vessels
Cardinal Veins
Heart
Spinal Ganglia and Nerves

25-26

stage 26

Blood Vessels
Heart

Entry 2

GEISHA Id	Cadherin-5	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show GACTTTTCTGTTTGTTCTTCTTTTTCTATGTACTGCTTAATGTTATGGGACACCGCTGAACTTAGTTTGCCTCATTTGG GAACAAATTGAAGCTCTACCAACTCTGACTCAGGCTCAGAAGAAGATGAAGAAGCTTATTCTGCTTTTCTCATTGTTCT TGGCTCCAGCATTCTCTTATAAAGAAAATCAGAAAATAAACCAAAACTTTTCTTCAAACAATACCAGTCATAAACGACT TAAGAGAGACTGGATATGGAACCGAATGCATATCAGAGAAGAGATTGATTCACCATTACCACATCACGTTGGCAAGCTC ACATCGAGTGTAGGGAACAAGAATGCTATGTATATTATTGAAGGTGAATCTGCCAACACCATCTTTAAAGTGCAAGGGT ACGATGGCGACATATACGCTTTTGAGAGGCTGGACAGAGAAAAGAAAGCAGAGTATGAGCTGACAGCACACATCATTGA CAGAAGAAACAACCGATCGCTGGAACCACCATCTAAATTTATTATCAAGGTTTCTGATATTAATGACAATGCTCCCATT TTTGTACAAAAGATATTCAATGGATCTGTCCCAGAAATGTCACGATTAGGAACCTCAGTTACCAAAGTGACAGCTGAAG ATGCCGATGACCCAACAGTTGCAGGTCATGCCACAGTTACCTACCAAATCATTAAAGGAAATGAATATTTCACAGTTGA TGACTCCGGTGTGATTTTCACAGCAAGAGCTGATTTGGACAGAGAGAGTCAATCAGCATATGAAATTATTGTTAAAGCA AAAGATGCTCTAGGGCTTACCGGGGAGTCAAGCACAGCTACAGTCATTATCAGGTTAACAGACATCAATGACAACTTCC CAGTATTCAAACACCCATCATTTCACTTCAGAGTTCCTGAAAACATTTCAGTAGGAGGAGAAGTTGGCCGAGTTAAAGT TGAAGATATTGATGAACCACAACACAGAAATACAAAATACAGTTTTGTCAGAGGAGACTACAGGGACACCTTTGAAATT ATAGCAAATCCATTCACCAATGAAGGAATCATTAGACCAAAGAAGCCCCTGGACTTCGAGAAAGTAGCAGAGTACAGGT TTGACATTGAAGCAACAGATCACAACGTTAACCCTGCCTACTACAAACCTGGTGGCTCCAGGAGCATTTCAACAATTAC CATTGAAGTTACAGATGTAGATGAGCCTCCTGTCTTCACCAAACTATCATATGAATTCAAAGTACGGGAGAATGATCCT GAAATAAAAACACTTGGCTCCGTTTGGGCACATGACCCCGACGCAGCTAAACGGAAAATCAGATTTGCTCGACGAAGAG CTAGCCCTAATGGAGACTATGTTAGAGTATCTGATTCTGGAATTATTCAGCTTCCTAAGCCCCTAGATAGAGAATTCAG CTCCTTATACAACATCACTGTGGCAGCCCAGGAAATCCTGGAGGATGGCCGTCTTTCTGACAGAGAATCACACGCACAA GTTCACGTCATTGTCACTGACGAAAATGATAATGCTCCAGAACTCGTTTATCCTGAGGAACCCAGAGTGTGCGAAAATG CTGCGCCGGGGAAGGTAATCATCAGGATTTCAGCTACTGACAAGGATGAAATATCACCTGGAGGTTTCTTCACATACTC CCTAACCACAGAAGATAGCAACTTCTCCTTGACTGAGAACCCCGATAACACAGCTAATATCACTGTCAAGGATGGACAG TTTAATCGTGAACTTGCCAAAATCCACTACCTGCCTGTCATCATCTCAGACAACGGCAATCCTGAGCTCAGCAGCACAA ACACACTTGTTATCAGTGTCTGCAAGTGTAATGAAAAAGGCGACTTCACTTTTTGTGAGGAAAGAGCTAAACAAGTTGG AGTTAGTGTACAAGCACTGGTGGCAATTTTCATCTGTATCTTCACAATCATTGCAGTGATTGCATTGCTAATTCTTCTA AGGAAGAGACACAAGAAGGATCTGAGCGGTCTCAGGAGGAATGTGGCAGAGATCCACGAGCAGCTTGTCACTTACGATG AAGAAGGTGGCGGTGAAATGGACACCACCAGCTATGATGTGTCCGTGCTCAACTCCGTGCGCAAGAATGGTATAAAGCC AGAAGTGGTGCCTTCTGCATATGCACAGGTCCAAAAGCCTCCTGGAAATACAACTTCTGGTGCTGGAGAAATGGAAATG ATGATCGAGGTTAAAAAGGACGAAGCTGACAATGACAGGGATCTGCTGCCATATGACACGCTTCACATTTATGGCTACG AAGGGGCCGAGTCCATTGCAGAATCTCTCAGTTCTTTGGAATCAGGCTCCTCAGACTCAGATATCGATTATGACTTCCT AAATGACTGGGGACCCAGGTTTAAAATGTTAGCTGAGCTGTATGGATCAGAACCAAATGAAGATTTTGTGTATTAAGTT CACATTAGCCATAAATTTTCTTCCTTCCACTACAGATAGGTATCAAGAGCCTGCCAATGGCCATGGAAAGATTCACAGC TCTTCACCCAGGCAGTAGTAGGATTTCAAACAGACACAAGAAAACCTGATAGCAGTAGAGATAAAACAAACCATACAAA TAAAGTACTGGCTTCCCTGGCACTGCTCTTCTTGCCAATGTTCTGTTCTTTCCTCAAAATTGCTGCTTGGGGACCCAGA GTCTCCTAGGACATGATTCCTCTCCCTGTCTCGATAGATCCTTCTCCTTATAAAGTGTTGTGGTATTGTCTCTGGTTTG TCCTTCATTCCTCTCATCCTGTGCTGCTTTCATCAGCATGCGCTCAGGATGACCCGCTGGAACACACAGGTTTGGTGGC AGTGGGAAAGAATGTTTTTATAACCTCCTGCATCTCCAGCCTGCCTGGCCTGACAGTAACATCTTTATTGATACTGCGC GCTTATGCTTACCCAGCAGAGGAAAGAAGGAACATATGGTTTATCACTTTAATATTAGAACCAATTCCATCACTTTCAA AAAGAGGCAAGATTTTTCCTTCTTTCCAATCTACTAATTATTCTAGCTTGATAGTCTTTGACTACATACATGAGTTACT GCAGATAAAATTAGACAGGATTTTTAGAGGCATAGTCTTGTTTCATCTCTCATTTTTAACAGCCTGATGATGATTTCAG GCACCTTTCTGGAGTGCTAGAATTTCCTCTAGCTACCAGCAAAATTGTTTTTCCTTTCTGTAAATAGGACCTCAGTGTT ACTCAATGGAACATATCCTGCAGGGCAGGAAATGTGGACATGAAGGGAATGTCAAGACTCCAGTACTGTAAATCTTTCT GGATAGCAGCATAAGTCTCTCTGGATCTCTAAAAAGGTTGAGTAAGTTTTTTATTCAACATTATTAACGGAAATGTATT ATTTCAGGGACAAAGGACGGGCCTCATTACTGTGAAACTGTTTTGATTTTTTTCTAAGCAGGTACTGTAAAACGGGTAT TTTCCACCTAGGAAAATATTGTAGAGTTCCAAACCAGGATATTACACACCTACACATTTGTCTGCATAAGAGAACCACA AATGGAAGTAAGGTTTTGGAGCGGCAGCTGTTCTGTCCATGGTAAGCACGTGTTCAGCTTCGTGCCTGATGAAGAGCCG CACAGTGAGCAGAATGAAATTTCCCACACCTGACGTTACCCAGCCAAAGGCATCATGTTAGAAGTGGGTCTCTTAGGAC AACGGCCTGTCTCTGCTTTCTGTCAAAGCAGATTCCTGTTATCTTCAGCAGGAACAGAGCCCTACTACACCAACACTCA GTTTTGCAGAATCTGTGCTACAGCTGTATGCATTAGTTTAGATGATTTGATTATTTAAATTTGGGAGCTAACCACATAA TACTAAATCTTTTTTTTCCTTCCTAAAACAATGTAGTGGGACCTCATTAGTTTCCTTTTCATTTGTTCGTGTCCGCTCC CTTCCCCACAGTACTTTCGTGGCAGGAGACAGCAATGCACAACAGTGCAGTCTCTTATCAGTCCTCACAACTGTATAAA GTTGTCTACTAAAATACTTGCTAGACACAATCACATAACTATCATCAGTGATTCAAATCACTAACATTTTCAAATATGA ACAAAGGGAAAGCTAAGTAGAATCCAGCCCATCAATCACATCACGTTTGGATCAGATCCCCTGTAAAAAAAAGTAAATT TGGGGATGACAGCCTTGGTTTTATTTGTAAATGTGTGTGTCCATTTTCTACTGTTTTGCTTAATCCAGCTAACAGTGTA TGTTATTGAGGTTCCACCCGTTAGTATATTATAAAGAATTGTAACTAATACTACTTACCATTTGGGTTTTCATCAGTAA TTAATGTATTGGCAATCAACAGGTAAAGTTAGTTATGAAACTATTTAGTGTAGCAAATAAAGTACTTTGGTAAGCATCA CCCAGATAGTATTCTTTGTAAGTGCTGTTTTCAAGCTTGTTTTATAAAGCTATTTTAAGGAATGCTGTATCAATTTCCA TTGCATAAAGACATTTGCACTGGGCGTTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 6

7-11

stage 8

stage 10

stage 11

Blood Islands
Blood Vessels

Entry 3

GEISHA Id	VE-Cadherin.Bollerot.2005	Data Source	Publication
Complete cDNA Template Probe	show CAATGGATCTGTCCCAGAAATGTCACGATTAGGAACCTCAGTTACCAAAGTGACAGCTGAAGATGCCGATGACCCAACA GTTGCAGGTCATGCCACAGTTACCTACCAAATCATTAAAGGAAATGAATATTTCACAGTTGATGACTCCGGTGTGATTT TCACAGCAAGAGCTGATTTGGACAGAGAGAGTCAATCAGCATATGAAATTATTGTTAAAGCAAAAGATGCTCTAGGGCT TACCGGGGAGTCAAGCACAGCTACAGTCATTATCAGGTTAACAGACATCAATGACAACTTCCCAGTATTCAAACACCCA TCATTTCACTTCAGAGTTCCTGAAAACATTTCAGTAGGAGGAGAAGTTGGCCGAGTTAAAGTTGAAGATATTGATGAAC CACAACACAGAAATACAAAATACAGTTTTGTCAGAGGAGACTACAGGGACACCTTTGAAATTATAGCAAATCCATTCAC CAATGAAGGAATCATTAGACCAAAGAAGCCCCTGGACTTCGAGAAAGTAGCAGAGTACAGGTTTGACATTGAAGCAACA GATCACAACGTTAACCCTGCCTACTACAAACCTGGTGGCTCCAGGAGCATTTCAACAATTACCATTGAAGTTACAGATG TAGATGAGCCTCCTGTCTTCACCAAACTATCATATGAATTCAAAGTACGGGAGAATGATCCTGAAATAAAAACACTTGG CTCCGTTTGGGCACATGACCCCGACGCAGCTAAACGGAAAATCAGATTTGCTCGACGAAGAGCTAGCCCTAATGGAGAC TATGTTAGAGTATCTGATTCTGGAATTATTCAGCTTCCTAAGCCCCTAGATAGAGAATTCAGCTCCTTATACAACATCA CTGTGGCAGCCCAGGAAATCCTGGAGGATGGCCGTCTTTCTGACAGAGAATCACACGCACAAGTTCACGTCATTGTCAC TGACGAAAATGATAATGCTCCAGAACTCGTTTATCCTGAGGAACCCAGAGTGTGCGAAAATGCTGCGCCGGGGAAGGTA ATCATCAGGATTTCAGCTACTGAC
Citation	Bollerot K, Romero S, Dunon D, Jaffredo T. Core binding factor in the early avian embryo: cloning of Cbfbeta and combinatorial expression patterns with Runx1. Gene Expr Patterns. 2005 Dec;6(1):29-39. Epub 2005 Jul 19.
Copyright	Copyright © 2005 Elsevier B.V. All rights reserved.
Comments	According to the authors, "The VE-cadherin probe was obtained from the clone pgp1n.pk007.4 (Delaware Biotechnology Institute). After a PCR amplification using the following primers: 5'-CAATGGATCTGTCCCAGAAA-3′ (forward) and 5'-GTCAGTAGCTGAAATCCTGA-3' (reverse), the insert encompassing 1050 bp was subcloned into pCR-II. Sense and antisense RNA probes were synthetised using r-UTP-Digoxygenin (Roche)." The sequence below was obtained from NCBI (NM_204227) using the given primers.

Stage

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Location (click to highlight)

Comments (click to highlight)

13-18

stage 18

Cranial Ganglia
Hindbrain

Figure 8 compares VE-Cadherin expression to Cbfβ, Ets-1, and Runx1.
Trigeminal Ganglia

Entry 4

GEISHA Id	VE-Cadherin.Jaffredo.2005	Data Source	Publication
Complete cDNA Template Probe	show GACTTTTCTGTTTGTTCTTCTTTTTCTATGTACTGCTTAATGTTATGGGACACCGCTGAACTTAGTTTGCCTCATTTGG GAACAAATTGAAGCTCTACCAACTCTGACTCAGGCTCAGAAGAAGATGAAGAAGCTTATTCTGCTTTTCTCATTGTTCT TGGCTCCAGCATTCTCTTATAAAGAAAATCAGAAAATAAACCAAAACTTTTCTTCAAACAATACCAGTCATAAACGACT TAAGAGAGACTGGATATGGAACCGAATGCATATCAGAGAAGAGATTGATTCACCATTACCACATCACGTTGGCAAGCTC ACATCGAGTGTAGGGAACAAGAATGCTATGTATATTATTGAAGGTGAATCTGCCAACACCATCTTTAAAGTGCAAGGGT ACGATGGCGACATATACGCTTTTGAGAGGCTGGACAGAGAAAAGAAAGCAGAGTATGAGCTGACAGCACACATCATTGA CAGAAGAAACAACCGATCGCTGGAACCACCATCTAAATTTATTATCAAGGTTTCTGATATTAATGACAATGCTCCCATT TTTGTACAAAAGATATTCAATGGATCTGTCCCAGAAATGTCACGATTAGGAACCTCAGTTACCAAAGTGACAGCTGAAG ATGCCGATGACCCAACAGTTGCAGGTCATGCCACAGTTACCTACCAAATCATTAAAGGAAATGAATATTTCACAGTTGA TGACTCCGGTGTGATTTTCACAGCAAGAGCTGATTTGGACAGAGAGAGTCAATCAGCATATGAAATTATTGTTAAAGCA AAAGATGCTCTAGGGCTTACCGGGGAGTCAAGCACAGCTACAGTCATTATCAGGTTAACAGACATCAATGACAACTTCC CAGTATTCAAACACCCATCATTTCACTTCAGAGTTCCTGAAAACATTTCAGTAGGAGGAGAAGTTGGCCGAGTTAAAGT TGAAGATATTGATGAACCACAACACAGAAATACAAAATACAGTTTTGTCAGAGGAGACTACAGGGACACCTTTGAAATT ATAGCAAATCCATTCACCAATGAAGGAATCATTAGACCAAAGAAGCCCCTGGACTTCGAGAAAGTAGCAGAGTACAGGT TTGACATTGAAGCAACAGATCACAACGTTAACCCTGCCTACTACAAACCTGGTGGCTCCAGGAGCATTTCAACAATTAC CATTGAAGTTACAGATGTAGATGAGCCTCCTGTCTTCACCAAACTATCATATGAATTCAAAGTACGGGAGAATGATCCT GAAATAAAAACACTTGGCTCCGTTTGGGCACATGACCCCGACGCAGCTAAACGGAAAATCAGATTTGCTCGACGAAGAG CTAGCCCTAATGGAGACTATGTTAGAGTATCTGATTCTGGAATTATTCAGCTTCCTAAGCCCCTAGATAGAGAATTCAG CTCCTTATACAACATCACTGTGGCAGCCCAGGAAATCCTGGAGGATGGCCGTCTTTCTGACAGAGAATCACACGCACAA GTTCACGTCATTGTCACTGACGAAAATGATAATGCTCCAGAACTCGTTTATCCTGAGGAACCCAGAGTGTGCGAAAATG CTGCGCCGGGGAAGGTAATCATCAGGATTTCAGCTACTGACAAGGATGAAATATCACCTGGAGGTTTCTTCACATACTC CCTAACCACAGAAGATAGCAACTTCTCCTTGACTGAGAACCCCGATAACACAGCTAATATCACTGTCAAGGATGGACAG TTTAATCGTGAACTTGCCAAAATCCACTACCTGCCTGTCATCATCTCAGACAACGGCAATCCTGAGCTCAGCAGCACAA ACACACTTGTTATCAGTGTCTGCAAGTGTAATGAAAAAGGCGACTTCACTTTTTGTGAGGAAAGAGCTAAACAAGTTGG AGTTAGTGTACAAGCACTGGTGGCAATTTTCATCTGTATCTTCACAATCATTGCAGTGATTGCATTGCTAATTCTTCTA AGGAAGAGACACAAGAAGGATCTGAGCGGTCTCAGGAGGAATGTGGCAGAGATCCACGAGCAGCTTGTCACTTACGATG AAGAAGGTGGCGGTGAAATGGACACCACCAGCTATGATGTGTCCGTGCTCAACTCCGTGCGCAAGAATGGTATAAAGCC AGAAGTGGTGCCTTCTGCATATGCACAGGTCCAAAAGCCTCCTGGAAATACAACTTCTGGTGCTGGAGAAATGGAAATG ATGATCGAGGTTAAAAAGGACGAAGCTGACAATGACAGGGATCTGCTGCCATATGACACGCTTCACATTTATGGCTACG AAGGGGCCGAGTCCATTGCAGAATCTCTCAGTTCTTTGGAATCAGGCTCCTCAGACTCAGATATCGATTATGACTTCCT AAATGACTGGGGACCCAGGTTTAAAATGTTAGCTGAGCTGTATGGATCAGAACCAAATGAAGATTTTGTGTATTAAGTT CACATTAGCCATAAATTTTCTTCCTTCCACTACAGATAGGTATCAAGAGCCTGCCAATGGCCATGGAAAGATTCACAGC TCTTCACCCAGGCAGTAGTAGGATTTCAAACAGACACAAGAAAACCTGATAGCAGTAGAGATAAAACAAACCATACAAA TAAAGTACTGGCTTCCCTGGCACTGCTCTTCTTGCCAATGTTCTGTTCTTTCCTCAAAATTGCTGCTTGGGGACCCAGA GTCTCCTAGGACATGATTCCTCTCCCTGTCTCGATAGATCCTTCTCCTTATAAAGTGTTGTGGTATTGTCTCTGGTTTG TCCTTCATTCCTCTCATCCTGTGCTGCTTTCATCAGCATGCGCTCAGGATGACCCGCTGGAACACACAGGTTTGGTGGC AGTGGGAAAGAATGTTTTTATAACCTCCTGCATCTCCAGCCTGCCTGGCCTGACAGTAACATCTTTATTGATACTGCGC GCTTATGCTTACCCAGCAGAGGAAAGAAGGAACATATGGTTTATCACTTTAATATTAGAACCAATTCCATCACTTTCAA AAAGAGGCAAGATTTTTCCTTCTTTCCAATCTACTAATTATTCTAGCTTGATAGTCTTTGACTACATACATGAGTTACT GCAGATAAAATTAGACAGGATTTTTAGAGGCATAGTCTTGTTTCATCTCTCATTTTTAACAGCCTGATGATGATTTCAG GCACCTTTCTGGAGTGCTAGAATTTCCTCTAGCTACCAGCAAAATTGTTTTTCCTTTCTGTAAATAGGACCTCAGTGTT ACTCAATGGAACATATCCTGCAGGGCAGGAAATGTGGACATGAAGGGAATGTCAAGACTCCAGTACTGTAAATCTTTCT GGATAGCAGCATAAGTCTCTCTGGATCTCTAAAAAGGTTGAGTAAGTTTTTTATTCAACATTATTAACGGAAATGTATT ATTTCAGGGACAAAGGACGGGCCTCATTACTGTGAAACTGTTTTGATTTTTTTCTAAGCAGGTACTGTAAAACGGGTAT TTTCCACCTAGGAAAATATTGTAGAGTTCCAAACCAGGATATTACACACCTACACATTTGTCTGCATAAGAGAACCACA AATGGAAGTAAGGTTTTGGAGCGGCAGCTGTTCTGTCCATGGTAAGCACGTGTTCAGCTTCGTGCCTGATGAAGAGCCG CACAGTGAGCAGAATGAAATTTCCCACACCTGACGTTACCCAGCCAAAGGCATCATGTTAGAAGTGGGTCTCTTAGGAC AACGGCCTGTCTCTGCTTTCTGTCAAAGCAGATTCCTGTTATCTTCAGCAGGAACAGAGCCCTACTACACCAACACTCA GTTTTGCAGAATCTGTGCTACAGCTGTATGCATTAGTTTAGATGATTTGATTATTTAAATTTGGGAGCTAACCACATAA TACTAAATCTTTTTTTTCCTTCCTAAAACAATGTAGTGGGACCTCATTAGTTTCCTTTTCATTTGTTCGTGTCCGCTCC CTTCCCCACAGTACTTTCGTGGCAGGAGACAGCAATGCACAACAGTGCAGTCTCTTATCAGTCCTCACAACTGTATAAA GTTGTCTACTAAAATACTTGCTAGACACAATCACATAACTATCATCAGTGATTCAAATCACTAACATTTTCAAATATGA ACAAAGGGAAAGCTAAGTAGAATCCAGCCCATCAATCACATCACGTTTGGATCAGATCCCCTGTAAAAAAAAGTAAATT TGGGGATGACAGCCTTGGTTTTATTTGTAAATGTGTGTGTCCATTTTCTACTGTTTTGCTTAATCCAGCTAACAGTGTA TGTTATTGAGGTTCCACCCGTTAGTATATTATAAAGAATTGTAACTAATACTACTTACCATTTGGGTTTTCATCAGTAA TTAATGTATTGGCAATCAACAGGTAAAGTTAGTTATGAAACTATTTAGTGTAGCAAATAAAGTACTTTGGTAAGCATCA CCCAGATAGTATTCTTTGTAAGTGCTGTTTTCAAGCTTGTTTTATAAAGCTATTTTAAGGAATGCTGTATCAATTTCCA TTGCATAAAGACATTTGCACTGGGCGTTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
Citation	Jaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C (2005). Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells. Int J Dev Biol. 2005;49(2-3):269-77.
Copyright	"Reprinted from Int. J. Dev. Biol., 49,Jaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C , Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells, 269-77, Copyright (2005), with permission from Copyright © 2005 UBC Press". All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204227).

Stage

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Location (click to highlight)

Comments (click to highlight)

13-18

stage 18

Aorta

31-44

stage 44

Aorta
Blood

Comparison with other genes

Entry 5

GEISHA Id	CDH5.Moran.2012	Data Source	Publication
Complete cDNA Template Probe	show GACTTTTCTGTTTGTTCTTCTTTTTCTATGTACTGCTTAATGTTATGGGACACCGCTGAACTTAGTTTGCCTCATTTGG GAACAAATTGAAGCTCTACCAACTCTGACTCAGGCTCAGAAGAAGATGAAGAAGCTTATTCTGCTTTTCTCATTGTTCT TGGCTCCAGCATTCTCTTATAAAGAAAATCAGAAAATAAACCAAAACTTTTCTTCAAACAATACCAGTCATAAACGACT TAAGAGAGACTGGATATGGAACCGAATGCATATCAGAGAAGAGATTGATTCACCATTACCACATCACGTTGGCAAGCTC ACATCGAGTGTAGGGAACAAGAATGCTATGTATATTATTGAAGGTGAATCTGCCAACACCATCTTTAAAGTGCAAGGGT ACGATGGCGACATATACGCTTTTGAGAGGCTGGACAGAGAAAAGAAAGCAGAGTATGAGCTGACAGCACACATCATTGA CAGAAGAAACAACCGATCGCTGGAACCACCATCTAAATTTATTATCAAGGTTTCTGATATTAATGACAATGCTCCCATT TTTGTACAAAAGATATTCAATGGATCTGTCCCAGAAATGTCACGATTAGGAACCTCAGTTACCAAAGTGACAGCTGAAG ATGCCGATGACCCAACAGTTGCAGGTCATGCCACAGTTACCTACCAAATCATTAAAGGAAATGAATATTTCACAGTTGA TGACTCCGGTGTGATTTTCACAGCAAGAGCTGATTTGGACAGAGAGAGTCAATCAGCATATGAAATTATTGTTAAAGCA AAAGATGCTCTAGGGCTTACCGGGGAGTCAAGCACAGCTACAGTCATTATCAGGTTAACAGACATCAATGACAACTTCC CAGTATTCAAACACCCATCATTTCACTTCAGAGTTCCTGAAAACATTTCAGTAGGAGGAGAAGTTGGCCGAGTTAAAGT TGAAGATATTGATGAACCACAACACAGAAATACAAAATACAGTTTTGTCAGAGGAGACTACAGGGACACCTTTGAAATT ATAGCAAATCCATTCACCAATGAAGGAATCATTAGACCAAAGAAGCCCCTGGACTTCGAGAAAGTAGCAGAGTACAGGT TTGACATTGAAGCAACAGATCACAACGTTAACCCTGCCTACTACAAACCTGGTGGCTCCAGGAGCATTTCAACAATTAC CATTGAAGTTACAGATGTAGATGAGCCTCCTGTCTTCACCAAACTATCATATGAATTCAAAGTACGGGAGAATGATCCT GAAATAAAAACACTTGGCTCCGTTTGGGCACATGACCCCGACGCAGCTAAACGGAAAATCAGATTTGCTCGACGAAGAG CTAGCCCTAATGGAGACTATGTTAGAGTATCTGATTCTGGAATTATTCAGCTTCCTAAGCCCCTAGATAGAGAATTCAG CTCCTTATACAACATCACTGTGGCAGCCCAGGAAATCCTGGAGGATGGCCGTCTTTCTGACAGAGAATCACACGCACAA GTTCACGTCATTGTCACTGACGAAAATGATAATGCTCCAGAACTCGTTTATCCTGAGGAACCCAGAGTGTGCGAAAATG CTGCGCCGGGGAAGGTAATCATCAGGATTTCAGCTACTGACAAGGATGAAATATCACCTGGAGGTTTCTTCACATACTC CCTAACCACAGAAGATAGCAACTTCTCCTTGACTGAGAACCCCGATAACACAGCTAATATCACTGTCAAGGATGGACAG TTTAATCGTGAACTTGCCAAAATCCACTACCTGCCTGTCATCATCTCAGACAACGGCAATCCTGAGCTCAGCAGCACAA ACACACTTGTTATCAGTGTCTGCAAGTGTAATGAAAAAGGCGACTTCACTTTTTGTGAGGAAAGAGCTAAACAAGTTGG AGTTAGTGTACAAGCACTGGTGGCAATTTTCATCTGTATCTTCACAATCATTGCAGTGATTGCATTGCTAATTCTTCTA AGGAAGAGACACAAGAAGGATCTGAGCGGTCTCAGGAGGAATGTGGCAGAGATCCACGAGCAGCTTGTCACTTACGATG AAGAAGGTGGCGGTGAAATGGACACCACCAGCTATGATGTGTCCGTGCTCAACTCCGTGCGCAAGAATGGTATAAAGCC AGAAGTGGTGCCTTCTGCATATGCACAGGTCCAAAAGCCTCCTGGAAATACAACTTCTGGTGCTGGAGAAATGGAAATG ATGATCGAGGTTAAAAAGGACGAAGCTGACAATGACAGGGATCTGCTGCCATATGACACGCTTCACATTTATGGCTACG AAGGGGCCGAGTCCATTGCAGAATCTCTCAGTTCTTTGGAATCAGGCTCCTCAGACTCAGATATCGATTATGACTTCCT AAATGACTGGGGACCCAGGTTTAAAATGTTAGCTGAGCTGTATGGATCAGAACCAAATGAAGATTTTGTGTATTAAGTT CACATTAGCCATAAATTTTCTTCCTTCCACTACAGATAGGTATCAAGAGCCTGCCAATGGCCATGGAAAGATTCACAGC TCTTCACCCAGGCAGTAGTAGGATTTCAAACAGACACAAGAAAACCTGATAGCAGTAGAGATAAAACAAACCATACAAA TAAAGTACTGGCTTCCCTGGCACTGCTCTTCTTGCCAATGTTCTGTTCTTTCCTCAAAATTGCTGCTTGGGGACCCAGA GTCTCCTAGGACATGATTCCTCTCCCTGTCTCGATAGATCCTTCTCCTTATAAAGTGTTGTGGTATTGTCTCTGGTTTG TCCTTCATTCCTCTCATCCTGTGCTGCTTTCATCAGCATGCGCTCAGGATGACCCGCTGGAACACACAGGTTTGGTGGC AGTGGGAAAGAATGTTTTTATAACCTCCTGCATCTCCAGCCTGCCTGGCCTGACAGTAACATCTTTATTGATACTGCGC GCTTATGCTTACCCAGCAGAGGAAAGAAGGAACATATGGTTTATCACTTTAATATTAGAACCAATTCCATCACTTTCAA AAAGAGGCAAGATTTTTCCTTCTTTCCAATCTACTAATTATTCTAGCTTGATAGTCTTTGACTACATACATGAGTTACT GCAGATAAAATTAGACAGGATTTTTAGAGGCATAGTCTTGTTTCATCTCTCATTTTTAACAGCCTGATGATGATTTCAG GCACCTTTCTGGAGTGCTAGAATTTCCTCTAGCTACCAGCAAAATTGTTTTTCCTTTCTGTAAATAGGACCTCAGTGTT ACTCAATGGAACATATCCTGCAGGGCAGGAAATGTGGACATGAAGGGAATGTCAAGACTCCAGTACTGTAAATCTTTCT GGATAGCAGCATAAGTCTCTCTGGATCTCTAAAAAGGTTGAGTAAGTTTTTTATTCAACATTATTAACGGAAATGTATT ATTTCAGGGACAAAGGACGGGCCTCATTACTGTGAAACTGTTTTGATTTTTTTCTAAGCAGGTACTGTAAAACGGGTAT TTTCCACCTAGGAAAATATTGTAGAGTTCCAAACCAGGATATTACACACCTACACATTTGTCTGCATAAGAGAACCACA AATGGAAGTAAGGTTTTGGAGCGGCAGCTGTTCTGTCCATGGTAAGCACGTGTTCAGCTTCGTGCCTGATGAAGAGCCG CACAGTGAGCAGAATGAAATTTCCCACACCTGACGTTACCCAGCCAAAGGCATCATGTTAGAAGTGGGTCTCTTAGGAC AACGGCCTGTCTCTGCTTTCTGTCAAAGCAGATTCCTGTTATCTTCAGCAGGAACAGAGCCCTACTACACCAACACTCA GTTTTGCAGAATCTGTGCTACAGCTGTATGCATTAGTTTAGATGATTTGATTATTTAAATTTGGGAGCTAACCACATAA TACTAAATCTTTTTTTTCCTTCCTAAAACAATGTAGTGGGACCTCATTAGTTTCCTTTTCATTTGTTCGTGTCCGCTCC CTTCCCCACAGTACTTTCGTGGCAGGAGACAGCAATGCACAACAGTGCAGTCTCTTATCAGTCCTCACAACTGTATAAA GTTGTCTACTAAAATACTTGCTAGACACAATCACATAACTATCATCAGTGATTCAAATCACTAACATTTTCAAATATGA ACAAAGGGAAAGCTAAGTAGAATCCAGCCCATCAATCACATCACGTTTGGATCAGATCCCCTGTAAAAAAAAGTAAATT TGGGGATGACAGCCTTGGTTTTATTTGTAAATGTGTGTGTCCATTTTCTACTGTTTTGCTTAATCCAGCTAACAGTGTA TGTTATTGAGGTTCCACCCGTTAGTATATTATAAAGAATTGTAACTAATACTACTTACCATTTGGGTTTTCATCAGTAA TTAATGTATTGGCAATCAACAGGTAAAGTTAGTTATGAAACTATTTAGTGTAGCAAATAAAGTACTTTGGTAAGCATCA CCCAGATAGTATTCTTTGTAAGTGCTGTTTTCAAGCTTGTTTTATAAAGCTATTTTAAGGAATGCTGTATCAATTTCCA TTGCATAAAGACATTTGCACTGGGCGTTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
Citation	Moran CM, Myers CT, Lewis CM, Krieg PA. Hedgehog regulates angiogenesis of intersegmental vessels through the VEGF signaling pathway. Dev Dyn. 2012 Jun;241(6):1034-42.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI ( NM_204227.1).

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 10

Area Opaca
Blood Vessels
Endothelial Cells

ISV = intersomitic vessels
control embryo
t0= time zero
t0=time zero

13-18

stage 18

Blood Vessels
Lateral Plate Mesoderm

ISV = intersomitic vessels
control embryo
pbs control embryo

Entry 6

GEISHA Id	VECADHERIN.Li.2013	Data Source	Publication
Complete cDNA Template Probe	show GACTTTTCTGTTTGTTCTTCTTTTTCTATGTACTGCTTAATGTTATGGGACACCGCTGAACTTAGTTTGCCTCATTTGG GAACAAATTGAAGCTCTACCAACTCTGACTCAGGCTCAGAAGAAGATGAAGAAGCTTATTCTGCTTTTCTCATTGTTCT TGGCTCCAGCATTCTCTTATAAAGAAAATCAGAAAATAAACCAAAACTTTTCTTCAAACAATACCAGTCATAAACGACT TAAGAGAGACTGGATATGGAACCGAATGCATATCAGAGAAGAGATTGATTCACCATTACCACATCACGTTGGCAAGCTC ACATCGAGTGTAGGGAACAAGAATGCTATGTATATTATTGAAGGTGAATCTGCCAACACCATCTTTAAAGTGCAAGGGT ACGATGGCGACATATACGCTTTTGAGAGGCTGGACAGAGAAAAGAAAGCAGAGTATGAGCTGACAGCACACATCATTGA CAGAAGAAACAACCGATCGCTGGAACCACCATCTAAATTTATTATCAAGGTTTCTGATATTAATGACAATGCTCCCATT TTTGTACAAAAGATATTCAATGGATCTGTCCCAGAAATGTCACGATTAGGAACCTCAGTTACCAAAGTGACAGCTGAAG ATGCCGATGACCCAACAGTTGCAGGTCATGCCACAGTTACCTACCAAATCATTAAAGGAAATGAATATTTCACAGTTGA TGACTCCGGTGTGATTTTCACAGCAAGAGCTGATTTGGACAGAGAGAGTCAATCAGCATATGAAATTATTGTTAAAGCA AAAGATGCTCTAGGGCTTACCGGGGAGTCAAGCACAGCTACAGTCATTATCAGGTTAACAGACATCAATGACAACTTCC CAGTATTCAAACACCCATCATTTCACTTCAGAGTTCCTGAAAACATTTCAGTAGGAGGAGAAGTTGGCCGAGTTAAAGT TGAAGATATTGATGAACCACAACACAGAAATACAAAATACAGTTTTGTCAGAGGAGACTACAGGGACACCTTTGAAATT ATAGCAAATCCATTCACCAATGAAGGAATCATTAGACCAAAGAAGCCCCTGGACTTCGAGAAAGTAGCAGAGTACAGGT TTGACATTGAAGCAACAGATCACAACGTTAACCCTGCCTACTACAAACCTGGTGGCTCCAGGAGCATTTCAACAATTAC CATTGAAGTTACAGATGTAGATGAGCCTCCTGTCTTCACCAAACTATCATATGAATTCAAAGTACGGGAGAATGATCCT GAAATAAAAACACTTGGCTCCGTTTGGGCACATGACCCCGACGCAGCTAAACGGAAAATCAGATTTGCTCGACGAAGAG CTAGCCCTAATGGAGACTATGTTAGAGTATCTGATTCTGGAATTATTCAGCTTCCTAAGCCCCTAGATAGAGAATTCAG CTCCTTATACAACATCACTGTGGCAGCCCAGGAAATCCTGGAGGATGGCCGTCTTTCTGACAGAGAATCACACGCACAA GTTCACGTCATTGTCACTGACGAAAATGATAATGCTCCAGAACTCGTTTATCCTGAGGAACCCAGAGTGTGCGAAAATG CTGCGCCGGGGAAGGTAATCATCAGGATTTCAGCTACTGACAAGGATGAAATATCACCTGGAGGTTTCTTCACATACTC CCTAACCACAGAAGATAGCAACTTCTCCTTGACTGAGAACCCCGATAACACAGCTAATATCACTGTCAAGGATGGACAG TTTAATCGTGAACTTGCCAAAATCCACTACCTGCCTGTCATCATCTCAGACAACGGCAATCCTGAGCTCAGCAGCACAA ACACACTTGTTATCAGTGTCTGCAAGTGTAATGAAAAAGGCGACTTCACTTTTTGTGAGGAAAGAGCTAAACAAGTTGG AGTTAGTGTACAAGCACTGGTGGCAATTTTCATCTGTATCTTCACAATCATTGCAGTGATTGCATTGCTAATTCTTCTA AGGAAGAGACACAAGAAGGATCTGAGCGGTCTCAGGAGGAATGTGGCAGAGATCCACGAGCAGCTTGTCACTTACGATG AAGAAGGTGGCGGTGAAATGGACACCACCAGCTATGATGTGTCCGTGCTCAACTCCGTGCGCAAGAATGGTATAAAGCC AGAAGTGGTGCCTTCTGCATATGCACAGGTCCAAAAGCCTCCTGGAAATACAACTTCTGGTGCTGGAGAAATGGAAATG ATGATCGAGGTTAAAAAGGACGAAGCTGACAATGACAGGGATCTGCTGCCATATGACACGCTTCACATTTATGGCTACG AAGGGGCCGAGTCCATTGCAGAATCTCTCAGTTCTTTGGAATCAGGCTCCTCAGACTCAGATATCGATTATGACTTCCT AAATGACTGGGGACCCAGGTTTAAAATGTTAGCTGAGCTGTATGGATCAGAACCAAATGAAGATTTTGTGTATTAAGTT CACATTAGCCATAAATTTTCTTCCTTCCACTACAGATAGGTATCAAGAGCCTGCCAATGGCCATGGAAAGATTCACAGC TCTTCACCCAGGCAGTAGTAGGATTTCAAACAGACACAAGAAAACCTGATAGCAGTAGAGATAAAACAAACCATACAAA TAAAGTACTGGCTTCCCTGGCACTGCTCTTCTTGCCAATGTTCTGTTCTTTCCTCAAAATTGCTGCTTGGGGACCCAGA GTCTCCTAGGACATGATTCCTCTCCCTGTCTCGATAGATCCTTCTCCTTATAAAGTGTTGTGGTATTGTCTCTGGTTTG TCCTTCATTCCTCTCATCCTGTGCTGCTTTCATCAGCATGCGCTCAGGATGACCCGCTGGAACACACAGGTTTGGTGGC AGTGGGAAAGAATGTTTTTATAACCTCCTGCATCTCCAGCCTGCCTGGCCTGACAGTAACATCTTTATTGATACTGCGC GCTTATGCTTACCCAGCAGAGGAAAGAAGGAACATATGGTTTATCACTTTAATATTAGAACCAATTCCATCACTTTCAA AAAGAGGCAAGATTTTTCCTTCTTTCCAATCTACTAATTATTCTAGCTTGATAGTCTTTGACTACATACATGAGTTACT GCAGATAAAATTAGACAGGATTTTTAGAGGCATAGTCTTGTTTCATCTCTCATTTTTAACAGCCTGATGATGATTTCAG GCACCTTTCTGGAGTGCTAGAATTTCCTCTAGCTACCAGCAAAATTGTTTTTCCTTTCTGTAAATAGGACCTCAGTGTT ACTCAATGGAACATATCCTGCAGGGCAGGAAATGTGGACATGAAGGGAATGTCAAGACTCCAGTACTGTAAATCTTTCT GGATAGCAGCATAAGTCTCTCTGGATCTCTAAAAAGGTTGAGTAAGTTTTTTATTCAACATTATTAACGGAAATGTATT ATTTCAGGGACAAAGGACGGGCCTCATTACTGTGAAACTGTTTTGATTTTTTTCTAAGCAGGTACTGTAAAACGGGTAT TTTCCACCTAGGAAAATATTGTAGAGTTCCAAACCAGGATATTACACACCTACACATTTGTCTGCATAAGAGAACCACA AATGGAAGTAAGGTTTTGGAGCGGCAGCTGTTCTGTCCATGGTAAGCACGTGTTCAGCTTCGTGCCTGATGAAGAGCCG CACAGTGAGCAGAATGAAATTTCCCACACCTGACGTTACCCAGCCAAAGGCATCATGTTAGAAGTGGGTCTCTTAGGAC AACGGCCTGTCTCTGCTTTCTGTCAAAGCAGATTCCTGTTATCTTCAGCAGGAACAGAGCCCTACTACACCAACACTCA GTTTTGCAGAATCTGTGCTACAGCTGTATGCATTAGTTTAGATGATTTGATTATTTAAATTTGGGAGCTAACCACATAA TACTAAATCTTTTTTTTCCTTCCTAAAACAATGTAGTGGGACCTCATTAGTTTCCTTTTCATTTGTTCGTGTCCGCTCC CTTCCCCACAGTACTTTCGTGGCAGGAGACAGCAATGCACAACAGTGCAGTCTCTTATCAGTCCTCACAACTGTATAAA GTTGTCTACTAAAATACTTGCTAGACACAATCACATAACTATCATCAGTGATTCAAATCACTAACATTTTCAAATATGA ACAAAGGGAAAGCTAAGTAGAATCCAGCCCATCAATCACATCACGTTTGGATCAGATCCCCTGTAAAAAAAAGTAAATT TGGGGATGACAGCCTTGGTTTTATTTGTAAATGTGTGTGTCCATTTTCTACTGTTTTGCTTAATCCAGCTAACAGTGTA TGTTATTGAGGTTCCACCCGTTAGTATATTATAAAGAATTGTAACTAATACTACTTACCATTTGGGTTTTCATCAGTAA TTAATGTATTGGCAATCAACAGGTAAAGTTAGTTATGAAACTATTTAGTGTAGCAAATAAAGTACTTTGGTAAGCATCA CCCAGATAGTATTCTTTGTAAGTGCTGTTTTCAAGCTTGTTTTATAAAGCTATTTTAAGGAATGCTGTATCAATTTCCA TTGCATAAAGACATTTGCACTGGGCGTTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
Citation	Li Y, Wang XY, Wu T, Chuai M, Lee KK, Wang LJ, Yang X. PTEN is involved in modulation of vasculogenesis in early chick embryos. Biol Open. 2013 June 15; 2(6): 587595. Published online 2013 May 9.
Copyright	Copyright held by the authors.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204227.1