Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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P4HB
prolyl 4-hydroxylase subunit beta

Gene

Official Symbol	P4HB
Official Full Name	prolyl 4-hydroxylase subunit beta
CGNC ID	5464
also known as	PDI, protein disulfide-isomerase\|R-cognin\|cellular thyroid hormone-binding protein\|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptide (protein disulfide isomerase-associated 1)\|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptide (protein disulfide isomerase; thyroid hormone binding protein p55)\|prolyl 4-hydroxylase beta-subunit\|prolyl 4-hydroxylase, beta polypeptide\|retina cognin, Protein disulfide-isomerase precursor(PDI), Prolyl 4- hydroxylase beta subunit, Cellular thyroid hormone binding protein, Retina cognin (R-cognin)
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001198710
Polypeptide	NP_001185639

Gene Expression

In Situ Hybridization

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	39651			FBgn0014002
Human	5034	ENSG00000185624		MIM:176790
Mouse	18453	ENSMUSG00000025130	All phenotypic alleles (2):Targeted, other(2)	MGI:97464
Xenopus	549257, 496005, 395048, 399248			494069, 1008324
Zebrafish	406673	ENSDARG00000052589	ZDB-GENE-080610-1	ZFIN:ZDB-GENE-080610-1

Gene Ontology

Molecular Function	protein disulfide isomerase activity, protein disulfide oxidoreductase activity
Biological Process	cell redox homeostasis, glycerol ether metabolic process
Cellular Component	endoplasmic reticulum lumen, plasma membrane

Links to other databases

Entrez Gene	374091
Ensembl Gene	ENSGALG00000007233
KEGG	gga:374091

GEISHA Id	PDIA1.54W.A8	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GCTCGAGGGATGGAGCAGCAGCTGATGATGATCTGGAAGATCTGGAGACAGATGAAGAAACGGACCTTGAGGAAGGTGA TGATGATGAGCAAAAAATCCAAAAGGATGAATTGTAAAGAGATGACTGATCTACATCACCCAAAAATCAGACACTAAAT TGGTTGCTGTTACGCAACCCAATGAGTCAGAAACCCATTAAGATTTAAAGCAGAAGGTGAATGACTGGAAATCCAGGGA TTGGCTCTTAAAGTAACGCTTCGCCCTCACTTGTCTTTACACTTCACTATCTTTTTTCTTTCTTTTCACTTTTGAGAAG GGATCTATCACTAGGTAGCCAGCCCAGCCAGCTGGGTTCATTATTTTTTTTATTGTGATGTACTTTTTTGTACACAGTT TTGTTTCAAGTATTTTGTTCTCTTGGGTTAGAAGCAAGTTGTGAAGTGGTAGCATGAATTTAATTGCCCAACATTCTGA AGCATTGCCACTAATATCTTCCAAGAAAGCTTTTTCTTTCTTTTTCTTTGAAAAGCCTGTAGATTTCTCCACCTGTCAG GGTTCTCATTTGTCTCAGCTGTTCTTCCCTGGAATCAAAGTATGTAGGGGAAGAGGCAATAGGCTGACTGCATCAGTCC TGGTGAAAGGTGGATGTGAAGGTGCTTCTCTTCATGCTCGCTAGACATTTCATTTCCTTTCCCTTCTGCTTTAAGACAC TTAAAGATGACTTCAAAATGTGGAAGGGTGGAATACTGTGCACTGGCTATGGCAGGCTCTAAGGGTGGAAGTGATTGCT GGCTCACCAGCTTAGATGTGCTGCCATCCTTTTGATAAATGCGAGACCATTTTGCAGTCACTTCCCATGCATTAGTTTG AATGGGTTGACCAGGAAGGTGGGTGGTATGGGAGGGCCTGATAAAATACATGAAACGAATTTGCAATACTGGGTTTG

Stage

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Comments (click to highlight)

7-12

stage 10

stage 12

Extraembryonic
Notochord

13-16

stage 13

stage 13

stage 15

stage 16

Blood Vessels
Extraembryonic
Notochord

Mouse

Emage	MGI:97464
MGI GXD	MGI:97464

Frog

Xenbase

494069, 1008324

Fruit Fly

BDGP	FBgn0014002

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-080610-1

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