GEISHA - A Chicken Embryo Gene Expression Database
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_

PAX3
paired box 3

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolPAX3
Official Full Namepaired box 3
CGNC ID3903
also known aspaired box protein Pax-3|Paired-box transcription factor protein PAX3|paired box gene 3
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204269
PolypeptideNP_989600
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.69
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly34629FBgn0003145
Human5077ENSG00000135903MIM:122880MIM:606597
Mouse18505ENSMUSG00000004872All phenotypic alleles (30):Spontaneous(5) Chemically induced(2) Radiation induced(6) Targeted, knock-out(2) Targeted, other(15) MGI:97487
Xenopus448464, 496376, 496377482739
Zebrafish30532, 100150137ENSDARG00000010192, ENSDARG00000028348ZDB-GENE-980526-52, ZDB-GENE-080917-53ZFIN:ZDB-GENE-980526-52, ZFIN:ZDB-GENE-080917-53
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene374127
Ensembl Gene
KEGGgga:374127

Entry 1

GEISHA IdPax3.Jensen.2005Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationJensen A. Potential Roles for BMP and Pax Genes in the Development of Iris Smooth Muscle. Dev Dyn. 2005 Feb;232(2):385-92.
CopyrightCopyright © 2005 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204269 )
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-39
stage 31
stage 36
stage 39
Eye
developing iris smooth muscle cells

Entry 2

GEISHA IdPax3.Amthor.2006Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationAmthor H, Otto A, Macharia R, McKinnell I, Patel K. Myostatin imposes reversible quiescence on embryonic muscle precursors. Dev Dyn. 2006 Mar;235(3):672-80.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
Wing
 
25-26
stage 26
Wing
 

Entry 3

GEISHA IdPax3.Bothe.2006Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationBothe I, Dietrich S. The molecular setup of the avian head mesoderm and its implication for craniofacial myogenesis. Dev Dyn. 2006 Oct;235(10):2845-60.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsInsufficient information provided to verify exact probe sequence. Sequence was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Dermatome
Neural Crest
Neural Plate/Tube
Somites
 

Entry 4

GEISHA IdPax3.Ahmed.2006Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationAhmed MU, Cheng L, Dietrich S. Establishment of the epaxial-hypaxial boundary in the avian myotome. Dev Dyn. 2006 Jul;235(7):1884-94.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
stage 22
stage 24
Dermatome
Myotome
Dermomyotome not in vocab.
25
stage 25
Dermatome
Myotome
Dermomyotome not in vocab.

Entry 5

GEISHA IdPAX3.Bothe.2007Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationBothe I, Ahmed MU, Winterbottom FL, von Scheven G, Dietrich S. Extrinsic versus intrinsic cues in avian paraxial mesoderm patterning and differentiation. Dev Dyn. 2007 Sep;236(9):2397-409.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 10
Neural Crest
Somites
Dermomyotome
13-18
stage 15
stage 15
stage 18
Dermomyotome
Myotome
Paraxial Mesoderm
Somites
Dermomyotome
Dermomyotome, Migrating mesodermal cells.
19-24
stage 24
stage 24
Dermomyotome
Myotome
Somites
Dermomyotome

Entry 6

GEISHA IdPAX3.Lin.2007Data SourcePublication
Complete cDNA Template Probeshow
GCATCCGGCCCTGTGTCATCTCCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGA
GACGGGATCCATCCGCCCGGGGGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATC
GAGGAGTACAAGCGGGAGAACGCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACC
GCAACACCGTGCCCTCAGTGAGCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGA
GCTGGAGAGGAAGGAGGCGGAGGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCA
GCAGCCCAGTCTGATGAAGGCTCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGA
CAACCTTCACAGCAGAGCAACTGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGA
AGAACTCGCACAAAGAGCCAAACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAG
CAGGCAGGAGC
CitationLin J, Redies C, Luo J. Regionalized expression of ADAM13 during chicken embryonic development. Dev Dyn. 2007 Mar;236(3):862-70.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsSequence below was obtained from NCBI (NM_204269) using the primers given in the publication. The forward primer of Pax3 was 5'-GCATCCGGCCCTGTGTCATCTC-3', and the reverse primer was 5'-GCTCCTGCCTGCTTCCTCCATCT-3'.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
Somites
 
13-18
stage 13
stage 13
stage 17
Dermatome
Head Mesenchyme
Myotome
Neural Plate/Tube
Somites
Dermomyotome
25-30
stage 28
Wing Muscles
 
31-36
stage 36
Myotome
Muscles of the Thorax and the Abdominal Wall

Entry 7

GEISHA IdPax3.Stricker.2006Data SourcePublication
Complete cDNA Template Probeshow
AGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCTCCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTC
CAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGGGGCCATCGGCGGCAGCAAACCCAAGCAGGTGACG
ACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAACGCGGGGATGTTCAGCTGGGAGATCCGCGACAGGC
TGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGAGCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGG
GAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGAGGAAGGAGACAAGAAGGCGAAGCACAGCATCGAC
GGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGCTCTGATATCGATTCTGAACCAGACTTACCCTTAA
AAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAACTGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACA
CTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAAACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGC
AACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTGATGGCTTTTAACCACCTGATCCCAGGAGGGTTTC
CACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGCCATCCTATCAGCCCACCTCCATACCGCAAGCCGT
GTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCCAAGCACTGTACACCAAAGCAGCCTCCCTTCAAAC
CCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGATTTTCCAGCTATACAGACAGCTTTGTGCCTCCGT
CCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTTCACCTCAGGTAATGGGACTCTTGACTAACCATGG
TGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTTGACTGGAGGTCTGGAGCCCACCACCACTGTCTCA
GCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGCCTGCCTACATCACAGTCCTACTGCCCACCGACCT
ATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGTATGGACAGTATGGACAAAGTGCCTTTCATTATCT
GAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGCTGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGG
ATACCAGGGGATCTTCTCAACACACTGCAGT
CitationStricker S, Brieske N, Haupt J, Mundlos S. Comparative expression pattern of Odd-skipped related genes Osr1 and Osr2 in chick embryonic development. Gene Expr Patterns. 2006 Oct;6(8):826-34. Epub 2006 Mar 22.
CopyrightReprinted with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.
CommentsAs information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269.1) and was truncated based on this 5' primer CTTCTAGATIGTGGA(AG)ATGGC(ACGT)CA(CT)CA(CT)G.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
stage 24
Leg
Leg Mesenchyme
 
25-28
stage 26
stage 28
Leg Mesenchyme
 

Entry 8

GEISHA IdPax3.Cheng.2004Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationCheng L, Alvares LE, Ahmed MU, El-Hanfy AS, Dietrich S. The epaxial-hypaxial subdivision of the avian somite. Dev Biol. 2004 Oct 15;274(2):348-69.
CopyrightReprinted from Developmental Biology, Volume 274, Issue 2, Louise Cheng, Lúcia E. Alvares, Mohi U. Ahmend, Amira S. El-Hanfy, and Susanne Dietrich, The epaxial-hypaxial subdivision of the avian somite, Pages 348-369, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsAuthors said probe came from (Goulding et al., 1994) who indicate "a 182 bp fragment encompassing the homeobox and octapeptide sequences was used for Pax-3."As information provided is insufficient to verify exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (Acc# NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7
stage 7
Dermomyotome
En1:blue
Pax3:red
Shh:blue

Entry 9

GEISHA IdPax3.Reijntjes.2007Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationReijntjes S, Stricker S, Mankoo BS. A comparative analysis of Meox1 and Meox2 in the developing somites and limbs of the chick embryo. Int J Dev Biol.(2007); 51(8:753-9.
CopyrightReprinted from Int. J. Dev. Biol., 51, Reijntjes S, Stricker S, Mankoo BS, A comparative analysis of Meox1 and Meox2 in the developing somites and limbs of the chick embryo, 753-9, Copyright © 2007 UBC Press, with permission. All rights reserved.
CommentsAccording to authors , "MyoD, Pax3 and Myf5 anti-sense probes were a kind gift of Philippa Francis-West.." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
Limb Buds
Somites
 
25-30
stage 25
stage 25
stage 25
Dermomyotome
Eye
Leg Muscles
Limb Buds
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Wing Muscles
 
31-44
stage 44
stage 44
Eye
Limb Buds
Paraxial Mesoderm
Somites
Fig. 2. All images for comparison.
Fig. 3. All images for comparison.

Entry 10

GEISHA IdPax3.Duprez.2002Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationDuprez, D (2002). Signals regulating muscle formation in the limb during embryonic development. Int J Dev Biol. 2002;46(7):915-25.
Copyright"Reprinted from Int. J. Dev. Biol., 46, Duprez, D, Signals regulating muscle formation in the limb during embryonic development, 915-25, Copyright (2002), with permission from Copyright © 2002 UBC Press". All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Leg Muscles
Myotome
Wing Muscles
 
25-30
stage 26
Wing Muscles
 
31-44
stage 44
Myotome
Wing Muscles
 

Entry 11

GEISHA IdPax3.Christ.2002Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationChrist B, Brand-Saberi B. Limb muscle development. Int J Dev Biol. 2002;46(7):905-14.
Copyright"Reprinted from Int. J. Dev. Biol., 46, Christ B, Brand-Saberi B, Limb muscle development, 905-14, Copyright (2002), with permission from Copyright © 2002 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Dermomyotome
Limb Buds
 
19-24
stage 22
Limb Buds
Compare with other genes
31-44
stage 44
Leg Muscles
Somites
Wing Muscles
Compare with other genes

Entry 12

GEISHA IdPax3.Firnberg.2002Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationFirnberg N, Neubüser A (2005).FGF signaling regulates expression of Tbx2, Erm, Pea3, and Pax3 in the early nasal region. Dev Biol. 2002 Jul 15;247(2):237-50.
Copyright"Reprinted from Developmental Biology, 247(2), Firnberg N, Neubüser A, FGF signaling regulates expression of Tbx2, Erm, Pea3, and Pax3 in the early nasal region, 237-50., Copyright (2002), with permission from Elsevier". Copyright © (2002) Elsevier B.V. All rights reserved.
CommentsAccording to authors, "The plasmids used to prepare the antisense riboprobes employed in this study have previously been described: (Refs)." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Head Mesenchyme
Surface Ectoderm
 
19-24
stage 24
Head Mesenchyme
Nasal Placode/Nerve
Surface Ectoderm
 
31-44
stage 44
  

Entry 13

GEISHA IdPAX3.Gamer.2001Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationGamer LW, Cox KA, Small C, Rosen V (2001). Gdf11 is a negative regulator of chondrogenesis and myogenesis in the developing chick limb. Dev Biol. 2001 Jan 15;229(2):407-20.
CopyrightCopyright © 2000 Academic Press. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-28
stage 26
stage 28
Somites
Wing
 

Entry 14

GEISHA IdPAX3.Amthor.2002bData SourcePublication
Complete cDNA Template Probeshow
AGTGAGCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAG
GCGGAGGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATG
AAGGCTCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGA
GCAACTGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGA
GCCAAACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACC
AACTGATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTC
TGAGCCATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTC
CCTCCAAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGC
ATGGATTTTCCA
CitationAmthor H, Christ B, Rashid-Doubell F, Kemp CF, Lang E, Patel K (2002). Follistatin regulates bone morphogenetic protein-7 (BMP-7) activity to stimulate embryonic muscle growth. Dev Biol. 2002 Mar 1;243(1):115-27
Copyright"Reprinted from Developmental Biology, 243(1), Amthor H, Christ B, Rashid-Doubell F, Kemp CF, Lang E, Patel K, Follistatin regulates bone morphogenetic protein-7 (BMP-7) activity to stimulate embryonic muscle growth., Pages No., Copyright (2002), with permission from Elsevier". Copyright © (2002) Elsevier B.V. All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
stage 29
Somites
Wing Muscles
 
31-44
stage 44
  

Entry 15

GEISHA IdPAX3.Huang.2003Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationHuang R, Stolte D, Kurz H, Ehehalt F, Cann GM, Stockdale FE, Patel K, Christ B. Ventral axial organs regulate expression of myotomal Fgf-8 that influences rib development. Dev Biol. 2003 Mar 1;255(1):30-47.
CopyrightCopyright © 2003 Elsevier Science (USA) All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-20
stage 20
Somites
 

Entry 16

GEISHA IdPAX3.Taneyhill.2005Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationTaneyhill LA, Bronner-Fraser M. Dynamic alterations in gene expression after Wnt-mediated induction of avian neural crest. Mol Biol Cell. 2005 Nov;16(11):5283-93. Epub 2005 Aug 31.
CopyrightCopyright 2004, MBC Online by The American Society for Cell Biology.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-16
stage 16
stage 16
stage 16
stage 16
Neural Crest
Neural Plate/Tube
 

Entry 17

GEISHA IdPAX3.Basch.2006Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationBasch ML, Bronner-Fraser M, García-Castro MI. Specification of the neural crest occurs during gastrulation and requires Pax7. Nature. 2006 May 11;441(7090):218-22.
CopyrightCopyright © 2006, Nature Publishing Group
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
stage 6
Early Embryo
Neural Plate/Tube
Primitive Streak
 

Entry 18

GEISHA IdPax3.McCabe.2008Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationMcCabe KL, Bronner-Fraser M. Essential role for PDGF signaling in ophthalmic trigeminal placode induction. Development. 2008 May;135(10):1863-74. Epub 2008 Apr 16.
CopyrightPublished by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Bronner-Fraser.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 8
stage 10
stage 11
Lateral Plate Mesoderm
Neural Crest
Paraxial Mesoderm
Surface Ectoderm
 

Entry 19

GEISHA IdPAX3.Sanders.2002Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationSanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50.
CopyrightCopyright © 2002-2011 by the Society for Neuroscience
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-26
stage 26
stage 26
Midbrain
Label shown is for 4 genes, including Pax3 laterally

Entry 20

GEISHA IdPAX3.Berthoud.2004Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationBerthoud VM, Singh R, Minogue PJ, Ragsdale CW, Beyer EC. Highly restricted pattern of connexin36 expression in chick somite development. Anat Embryol (Berl). 2004 Nov;209(1):11-8.
Copyright© Springer-Verlag 2004
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
Dermatome
Dermomyotome
Somites
Spinal Cord
Spinal Ganglia and Nerves
double labeled
25-29
stage 26
stage 29
Leg Mesenchyme
double labeled

Entry 21

GEISHA IdPAX3.Merchan.2011Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationMerchán,P, Bardet, SM, Puelles, L, Ferran, JL, Comparison of Pretectal Genoarchitectonic Pattern between Quail and Chicken Embryos. Front Neuroanat. 2011; 5: 23. Prepublished online 2010 December 29. Published online 2011 April 5
CopyrightCopyright © 2011 Merchán, Bardet, Puelles and Ferran.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204269.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-27
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 27
stage 27
stage 27
Midbrain
Quail

Entry 22

GEISHA IdPAX3.Canning.2008Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationCanning CA, Lee L, Luo SX, Graham A, Jones CM. Neural tube derived Wnt signals cooperate with FGF signaling in the formation and differentiation of the trigeminal placodes. Neural Dev. 2008 Dec 15;3:35.
Copyright© 2008 Canning et al.; licensee BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0),
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 8
stage 9
stage 10
stage 11
stage 11
Neural Plate/Tube
Paraxial Mesoderm
Placode
Somites
 

Entry 23

GEISHA IdPAX3.Moeller.2003Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationMoeller C, Swindell EC, Kispert A, Eichele G Carboxypeptidase Z (CPZ) modulates Wnt signaling and regulates the development of skeletal elements in the chicken. Development. 2003 Nov;130(21):5103-11. Epub 2003 Aug 27
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-21
stage 21
stage 21
stage 21
Unlabeled
uninfected side (left) - control embryo
uninfected side - control embryo

Entry 24

GEISHA IdPAX3.Bobak.2009Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationBobak N, Agoston Z, Schulte D. Evidence against involvement of Bmp receptor 1b signaling in fate specification of the chick mesencephalic alar plate at HH16. Neurosci Lett. 2009 Sep 25;461(3):223-8. Epub 2009 Jun 16
CopyrightReprinted with permission from Elsevier. Copyright © 2009 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-16
stage 16
stage 16
Midbrain
 

Entry 25

GEISHA IdPAX3.Davey.2006Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationDavey MG, Paton IR, Yin Y, Schmidt M, Bangs FK, Morrice DR, Smith TG, Buxton P, Stamataki D, Tanaka M, Münsterberg AE, Briscoe J, Tickle C, Burt DW. The chicken talpid3 gene encodesa novel protein essentialfor Hedgehog signaling. Genes Dev. 2006 May 15; 20(10): 1365–1377.
CopyrightCopyright © 2006, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-20
stage 20
stage 20
Myotome
 

Entry 26

GEISHA IdPAX3.McCabe.2011Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationKathryn L. McCabe, Marianne Bronner. Tetraspanin, CD151, is required for maintenance of trigeminal placode identity. J Neurochem. 2011 April; 117(2): 221–230.
Copyright© 2011 The Authors. Journal of Neurochemistry © 2011 International Society for Neurochemistry
Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204269.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-14
stage 14
stage 14
Placode
 

Entry 27

GEISHA IdPAX3.Alvarez.2003Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationAlvares LE, Schubert FR, Thorpe C, Mootoosamy RC, Cheng L, Parkyn G, Lumsden A, Dietrich S. Intrinsic, Hox-dependent cues determine the fate of skeletal muscle precursors. Dev Cell. 2003 Sep;5(3):379-90.
CopyrightCopyright © 2012 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204269.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Central Nervous System
Somites
 

Entry 28

GEISHA IdPAX3.Havis.2012Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationHavis E, Coumailleau P, Bonnet A, Bismuth K, Bonnin MA, Johnson R, Fan CM, Relaix F, Shi DL, Duprez D. Sim2 prevents entry into the myogenic program by repressing MyoD transcription during limb embryonic myogenesis. Development. 2012 Jun;139(11):1910-20.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-22
stage 22
stage 22
stage 22
stage 22
stage 22
stage 22
Limb Buds
Somites
Wing
cPAX3(blue)
cPAX3(brown)
dorsal and ventral view

Entry 29

GEISHA IdPAX3.LIN.2012Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationLin J, Wang C, Redies C Expression of delta-protocadherins in the spinal cord of the chicken embryo. J Comp Neurol. 2012 May 1;520(7):1509-31.
CopyrightCopyright © 2011 Wiley Periodicals, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
Spinal Cord
Pax3: red
Pcdh18: green
Pcdh19: green
Pcdh8: green
25-30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
Myotome
Neural Plate/Tube
Spinal Cord
Spinal Ganglia and Nerves
Cervical section of the spine.
Lumbar section of the spine.
Sacral section of the spine.
Thoracic section of the spine.
ne, neuroepithelial layer

Entry 30

GEISHA IdPAX3.Ferran.2007Data SourcePublication
Complete cDNA Template Probeshow
TCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCCAA
GCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGATT
TTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTTCA
CCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTTGA
CTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGCCT
GCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGTAT
G
CitationFerran JL, Sánchez-Arrones L, Sandoval JE, Puelles L. A model of early molecular regionalization in the chicken embryonic pretectum. J Comp Neurol. 2007 Dec 1;505(4):379-403.
CopyrightCopyright © 1999–2012 John Wiley & Sons, Inc. All Rights Reserved.
CommentsThe sequence below was obtained from NCBI (acc #: NM_204269 - Showing 475 bp region from base 951 to 1425) using the information provided in the publication.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
stage 17
Diencephalon
 
25
stage 25
stage 25
Forebrain
 

Entry 31

GEISHA IdPAX3.Reijntjes.2010Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationReijntjes S, Francis-West P, Mankoo BS. Retinoic acid is both necessary for and inhibits myogenic commitment and differentiation in the chick limb. Int J Dev Biol. 2010;54(1):125-34
Copyright© 2009 UBC Press
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
Limb Buds
G. Stage 22 embryo: normal expression
25-30
stage 25
stage 25
Limb Buds
Somites
Spinal Cord
H. Untreated/Control embryo: Shows the normal expression of Pax3.
H. Untreated/Control embryo: Shows the normal expression of Pax3.
31-44
stage 44
stage 44
  

Entry 32

GEISHA IdPax-3.Cauthen.2001Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationCauthen CA, Berdougo E, Sandler J, Burrus LW. Comparative analysis of the expression patterns of Wnts and Frizzleds during early myogenesis in chick embryos. Mech Dev. 2001 Jun;104(1-2):133-8.
CopyrightCopyright © 2001 Elsevier Science Ireland Ltd.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
Neural Plate/Tube
Somites
 
31-44
stage 44
  

Entry 33

GEISHA IdPax3.Rallis.2001Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationRallis C, Stamataki D, Pontikakis S, Mankoo BS, Karagogeos D. Isolation of the avian homologue of the homeobox gene Mox2 and analysis of its expression pattern in developing somites and limbs. Mech Dev. 2001 Jun;104(1-2):121-4.
CopyrightCopyright © 2001 Elsevier Science Ireland Ltd.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 16
stage 16
stage 16
stage 16
Dermomyotome
Neural Plate/Tube
Somites
dl, dorsal lip
vl, ventral lip
19-24
stage 21
Limb Buds
 
25-30
stage 26
Limb Buds
 
31-44
stage 44
stage 44
  

Entry 34

GEISHA IdPax3.Delfini.2000Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationDelfini MC, Duprez D. Paraxis is expressed in myoblasts during their migration and proliferation in the chick limb bud. Mech Dev. 2000 Sep;96(2):247-51.
CopyrightCopyright © 2000 Elsevier Science Ireland Ltd.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Neural Plate/Tube
Somites
Wing
 
19-24
stage 20
stage 20
stage 21
stage 21
stage 21
stage 21
stage 24
stage 24
Limb Buds
Neural Plate/Tube
Somites
Wing
 
31-44
stage 44
stage 44
stage 44
  

Entry 35

GEISHA IdPax-3.Goulding.1994Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationGoulding M, Lumsden A, Paquette AJ. Regulation of Pax-3 expression in the dermomyotome and its role in muscle development. Development. 1994 Apr;120(4):957-71.
Copyright© 1994 by Company of Biologists
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 13
stage 13
stage 15
stage 18
stage 18
Dermomyotome
Ear/Otic Placode
Hindbrain
Myotome
Neural Plate/Tube
Sclerotome
Somites
 
19-24
stage 19
stage 22
stage 22
Leg Muscles
Limb Buds
Somites
Spinal Cord
 
25-30
stage 25
stage 25
Leg Bones
Leg Muscles
Notochord
Vertebrae
 
31-44
stage 44
stage 44
stage 44
  

Entry 36

GEISHA IdPax-3.Nelson.1996Data SourcePublication
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationNelson CE, Morgan BA, Burke AC, Laufer E, DiMambro E, Murtaugh LC, Gonzales E, Tessarollo L, Parada LF, Tabin C. Analysis of Hox gene expression in the chick limb bud. Development. 1996 May;122(5):1449-66.
CopyrightCopyright © 1996 by Company of Biologists
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Leg
Neural Plate/Tube
 
31-44
stage 44
  

Entry 37

GEISHA IdPax3.Otto.2006Data SourcePublication
Complete cDNA Template Probeshow
TCAGTGAGCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGG
AGGCGGAGGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGA
TGAAGGCTCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCA
GAGCAACTGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAA
GAGCCAAACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAA
CCAACTGATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTC
TCTGAGCCATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTC
TCCCTCCAAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAG
GCATGGATTTTCCA
CitationOtto A, Schmidt C, Patel K. Pax3 and Pax7 expression and regulation in the avian embryo. Anat Embryol (Berl). 2006 Aug;211(4):293-310.
CopyrightCopyright © Springer-Verlag 2006
CommentsThe complete cDNA template sequence was obtained from the information in the publication as described in Otto et al. 2006.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Unlabeled
 
7-12
stage 8
stage 9
stage 9
stage 10
stage 12
Head Mesenchyme
Neural Plate/Tube
Somites
Tail
 
13-18
stage 16
stage 18
stage 18
Cranial PNS
Hindbrain
Limb Buds
Midbrain
Nasal Placode/Nerve
Neural Plate/Tube
Somites
 
19-24
stage 23
stage 23
Cranial PNS
Dermomyotome
Hindbrain
Limb Buds
Midbrain
Neural Plate/Tube
Somites
Spinal Ganglia and Nerves
 
25-30
stage 26
stage 26
stage 29
stage 29
Dermomyotome
Heart
Hindbrain
Hypaxial Muscles
Leg
Leg Muscles
Limb Buds
Midbrain
Somites
Spinal Ganglia and Nerves
Tail
Wing Muscles
 
31-44
stage 44
  

Entry 38

GEISHA IdPAX3.Liem.1995Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
CCCGAGAGGAGGCTTCCCGTTGGAAGTCTCTACCCCTCTCGGCCAGGGCAGAGTCAATCAGCTCGGAGGAGTGTTCATC
AACGGGCGGCCGCTGCCCAACCATATCCGCCACAAGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCT
CCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGAGACGGGATCCATCCGCCCGGG
GGCCATCGGCGGCAGCAAACCCAAGCAGGTGACGACGCCGGACGTGGAGAAGAAAATCGAGGAGTACAAGCGGGAGAAC
GCGGGGATGTTCAGCTGGGAGATCCGCGACAGGCTGCTCAAGGACGGCGTCTGCGACCGCAACACCGTGCCCTCAGTGA
GCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAGGCGGA
GGAAGGAGACAAGAAGGCGAAGCACAGCATCGACGGCATCCTCAGCGAGAGAGCATCAGCAGCCCAGTCTGATGAAGGC
TCTGATATCGATTCTGAACCAGACTTACCCTTAAAAAGAAAGCAGCGTCGCAGCAGGACAACCTTCACAGCAGAGCAAC
TGGAAGAGCTGGAAAGAGCTTTTGAGAGGACACACTACCCTGACATTTATACTCGGGAAGAACTCGCACAAAGAGCCAA
ACTCACGGAAGCTCGAGTTCAGGTTTGGTTTAGCAACCGCCGTGCTAGATGGAGGAAGCAGGCAGGAGCCAACCAACTG
ATGGCTTTTAACCACCTGATCCCAGGAGGGTTTCCACCCAGCGCCATGCCGACTCTGCCGACATACCAGCTCTCTGAGC
CATCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCC
AAGCACTGTACACCAAAGCAGCCTCCCTTCAAACCCAGAGAGCAGCTCTGCCTATTGCCTACCCAGCACCAGGCATGGA
TTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCCGGGCCCTCAAATCCCATGAACCCTGCCATTGGCAATGGCCTTT
CACCTCAGGTAATGGGACTCTTGACTAACCATGGTGGTGTGCCTCACCAGCCCCAAACTGATTATGCCCTGTCCCCTTT
GACTGGAGGTCTGGAGCCCACCACCACTGTCTCAGCCAGCTGCAGTCAGCGGCTAGATCACATGAAGAGTTTAGACAGC
CTGCCTACATCACAGTCCTACTGCCCACCGACCTATAGCACCACCGGCTACAGCATGGACCCTGTCACCGGCTACCAGT
ATGGACAGTATGGACAAAGTGCCTTTCATTATCTGAAGCCAGATATCGCATAAATGAACTGTCCACTTCAAGTTAAAGC
TGGTGTTATTTTCCGGTCTCGCTCCAGAGCTTGGATACCAGGGGATCTTCTCAACACACTGCAGT
CitationLiem Jr., K.F, Tremml G, Roelink H, Jessell T.M. Dorsal differentiation of neural plate cells induced by BMP-mediated signals from epidermal ectoderm. Cell. 1995; 82: 969-979.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
stage 10
stage 10
Neural Plate/Tube
Paraxial Mesoderm
dorsal region of neural fold
dorsal region of the neural tube
lateral region of neutral plate
neural plate rostral to Hensen's node
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.69

Mouse

EmageMGI:97487
EurexpressMGI:97487
MGI GXDMGI:97487

Frog

Xenbase482739

Fruit Fly

BDGPFBgn0003145

Zebra Finch

ZEBrAPAX3

Zebrafish

ZFINZDB-GENE-980526-52, ZDB-GENE-080917-53
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