GEISHA - A Chicken Embryo Gene Expression Database
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PDCD4
programmed cell death 4

Gene
Official SymbolPDCD4
Official Full Nameprogrammed cell death 4
CGNC ID6604
also known asprogrammed cell death protein 4|programmed cell death 4 (neoplastic transformation inhibitor)|protein I11/6
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_204304
PolypeptideNP_989635
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly32337FBgn0030520
Human27250ENSG00000150593MIM:608610
Mouse18569ENSMUSG00000024975All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:107490
Xenopus407925, 380222959686
Zebrafish321061, 406261ENSDARG00000041022, ENSDARG00000021702ZDB-GENE-030131-9847, ZDB-GENE-040426-1920ZFIN:ZDB-GENE-030131-9847, ZFIN:ZDB-GENE-040426-1920
Gene Ontology
Molecular FunctionRNA binding
Biological Processcell aging, negative regulation of JUN kinase activity, more...negative regulation of transcription, DNA-templated
Cellular Componentcytoplasm, cytosol, nucleus
Links to other databases
Entrez Gene374191
Ensembl GeneENSGALG00000008700
KEGGgga:374191
GEISHA IdPDCD4.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GTCACAGGNAGATGACATCTAAGCTTATCTCCGAACCTTTGTGGGACAGTAGTAAGCAAAACTGATGTGGAAAAGTCAT
TTGACAAACTGCTTAAAGATCTACCTGATTGGTGTGGATTCTCCCAGGGCACCACAGTTGGTGGGCCAGTTTATGCAAG
AGCTGTGGAGATGGGATTTGAGCAGTACTTACATAGATGGCTACAAAGGCACTGTGGATGCATCCAAGCTCGAGCTGCA
CTGGACCGAGCTACTGTGTTGCTGAGCGTGACAAAGGGTGGAAAGCGTATAGACAATGTGTGGGGCTCAGGAGGTGGCC
AGCAGTCTGTGAAACACCTTGTTAAAGAGATTGATATGCTGCTGAAAGAGTACTTGCTTTCTGGAGACCTGCTGGAAGC
TGAACGTTGCCTTCAGGAACTGGAAGTACCCCATTTTCACCATGAACTTGTATATGAAGCAATTGTGATGGTTTTTGAG
TCAACTGGAGAGAAGACCTTTAAAATGATGCTGGATTTGCTGAAATCTCTCTCGAGGTCTTCTGTGATTACTATGGACC
AAATGAAAAGAGGCTACGAACGAGTTTACTGTGAAATACCAGATATTAACCTGGATGTGCCACACTCCTATTCTGTGCT
TGAGCGGTTTTGTGGAGGAATGCTTTCAGGCTGGAATCATCTCCAAACCAACTGAGAGACCTCTGTCCTTCAAGGGGCA
GGAAGCGAATTTGTGAGTGAAGGAGAACGGAGGCCGGGTTAAACCAGAAAGCTAACTGAATGTTGGAAACCAACTGCTT
GAAGCCTTAGAAGTTGAAAGGGGAACAAAGATGGGTATCTCTATATTTATATTTTTCAGACCACCAGGCCTTTTTGGCA
CGTGTGCCATGTTTGTATGGATATGGCTTTGAATATACCAAATTAAGAAGT
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
Area Pellucida
Epiblast
area pellucida epiblast
1-3
stage 3
Epiblast
Neural Plate/Tube
epiblast surrounding the primitive streak but not immediately adjacent / prospective neural plate
4-6
stage 5
Neural Plate/Tube
Primitive Streak
neural plate / primitive streak
7
stage 7
Headfold
Neural Plate/Tube
Primitive Streak
neural plate / head fold / primitive streak
all
 
  

Mouse

EmageMGI:107490
MGI GXDMGI:107490

Frog

Xenbase959686

Fruit Fly

BDGPFBgn0030520

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-9847, ZDB-GENE-040426-1920
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