GEISHA - A Chicken Embryo Gene Expression Database
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SPARC
secreted protein acidic and cysteine rich

Gene
Official SymbolSPARC
Official Full Namesecreted protein acidic and cysteine rich
CGNC ID3072
also known asSPARC|BM-40|ON|basement-membrane protein 40|osteonectin|secreted protein acidic and rich in cysteine|secreted protein, acidic, cysteine-rich (osteonectin)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204410
PolypeptideNP_989741
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2613
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6678ENSG00000113140MIM:182120
Mouse20692ENSMUSG00000018593All phenotypic alleles (6):Targeted, knock-out(3) Targeted, other(3) MGI:98373
Xenopus394973, 3792771009629
Zebrafish321357ENSDARG00000019353ZDB-GENE-030131-9ZFIN:ZDB-GENE-030131-9
Gene Ontology
Molecular Functioncalcium ion binding
Biological Processsignal transduction
Cellular Componentbasement membrane, extracellular space
Links to other databases
Entrez Gene386571
Ensembl GeneENSGALG00000004184
KEGGgga:386571
GEISHA IdSPARCRP1.Chambers.2006Data SourcePublication
Complete cDNA Template Probeshow
GAATTCCCGAGCCCTGCTCGGGACTACGAGGGTTTGCTGCAAGATGAGAACCTGGATTTTCTTCTTCCTCTGCCTGGCA
GGCAAAGCCCTGGCAGCTCCGCAAGAGGCTCTGGCTGATGAGACGGAGGTGATTGAAGATCTCACCACAGAGGGGCCTG
TGGGGGCAAACCCTGTCCAAGTGGAGGTGGGAGAGTTTGAGGAACCTACAGAAGATGTAGAGGAGATCGTCGCAGAGAA
TCCCTGCCAGAACCATCACTGCAAGCATGGCAAGGTGTGCGAGGTGGATGACAACAACTCACCCATGTGCGTGTGCCAG
GACCCCTCCAGCTGCCCGGCCCACTCCGGCGTCTTTGAGAAGGTCTGTGGCACTGACAACAAGACCTATGACTCCTCCT
GCCACTTCTTTGCCACCAAGTGCACCTTGGAGGGAACCAAGAAGGGACACAAGCTGCACCTGGACTACATCGGGCCTTG
CAAATTCATCCCTGCCTGCCTGGACACTGAGCTGACAGAGTTCCCCCTGCGCATGCGGGACTGGCTGAAGAATGTGCTG
ATCACCCTGTATGAGCGCGATGAGGACAACAACCTACTGACCGAGAAGCAGAAGCTCAAGGTGAAGAATATCCACGAGA
ATGAGAAGCGCCTGGAGGCCGGCGACCACACCGTGGAGCTGCTGGCCCGCGACTTTGAGAAGAACTACAACATGTACAT
CTTCCCCGTGCACTGGCAGTTCGGGCAGCTGGACCAGCACCCCATTGATGGGTACCTGTCCCACACTGAGCTGGCCCCG
CTCCGTGCCCCACTCATCCCCATGGAGCACTGCACCACTCGCTTCTTTGAGGCCTGCGACTTAGACTTCGACAAGTACA
TCGCCCTGGAGGAATGGGCCAGCTGCTTTGGCATTAAGGAGCAGGACATAGACAAGGATCTGGTGATCTAAAGCCTCAG
CTTCCTCCTCTGCTGCCAACTTTGTCTTGTTTTAACCTTTCCCCACTTTCTTTCGGGTTTT
CitationChambers, D, Mason, I, A high throughput messenger RNA differential display screen identifies discrete domains of gene expression and novel patterning processes along the developing neural tube. BMC Dev Biol. 2006; 6: 9. Published online 2006 February 24.
CopyrightCopyright © 2006 Chambers and Mason; licensee BioMed Central Ltd.This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204410.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Hindbrain
Midbrain
Paraxial Mesoderm
Rhombomeres
Somites
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2613

Mouse

EmageMGI:98373
EurexpressMGI:98373
MGI GXDMGI:98373

Frog

Xenbase1009629

Fruit Fly

BDGP

Zebra Finch

ZEBrASPARC

Zebrafish

ZFINZDB-GENE-030131-9
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