GEISHA - A Chicken Embryo Gene Expression Database
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PAX5
paired box 5

Gene
Official SymbolPAX5
Official Full Namepaired box 5
CGNC ID49160
also known asPax5B, paired box protein Pax-5|Pax5B with a deletion of exon 8 protein|paired box gene 5 (B-cell lineage specific activator)|paired box protein Pax-5A|paired box protein Pax-5B
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204424
PolypeptideNP_989755
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.400
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5079ENSG00000196092MIM:167414MIM:167414
Mouse18507ENSMUSG00000014030All phenotypic alleles (8):Targeted, other(8) MGI:97489
Xenopus100493222, 378499479875
Zebrafish60636ENSDARG00000037383ZDB-GENE-001030-2ZFIN:ZDB-GENE-001030-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene387330
Ensembl Gene
KEGGgga:387330
GEISHA IdPAX5.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAAAAGAAAAGGGAAGGAAGGGC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTGAATAGGTCTCCACGCATCTGcDNA Template Length781
Forward cDNA Template Probeshow
ATTCGAGAAACTCTACCCGGGAGGATGGCCATTGGGTACTGGAGGTTCCTGAATACCTTCATCACGCTTGCGCTTGTTG
CTCTCGGTGCCGGGAGAGGCGATGCCCAGGATCCCACTGATGGAGTAGGACGAGCCGGCGGAGTCAGTGCTGACAGAGG
ACACCTGGGTAACGGAGCCTGTGGAGGCTATGCTGTGACTGGAGACTGGGACTTGCTGATTGGGCGGCTGCTGCACCTT
TGTCCGTATGATCCTGTTAATTGAACTGACGCTGGGCACGGTGTCGTTATCGCACACTCGCTCCGCGAGGAGTCTGTCC
CTGATCTCCCAGGCAAACATGGTGGGATTTTGGCGTTTGTACTCTGCAATTTTTTCGACAACTTTGGGTGTGGCGACCT
TTGGTTTTGATCCTCCAATCACTCCAGGCTTAATGCTCCCGGTTTCATAATACCTGCCGAGTATTTTGCTGACGCAGCC
GTGGCTGACGCGGAGCTGCCTGGAGATGTCGCACGGCCTCACCCCCTGGTGCGCCAGCTCCACGATCCGCTGCCGGACG
ACGTCGGGCAGGGGGCGGCCATTCACAAAAACGCCCCCCAGCTGGTTCACACCTCCGTGTCCTGTGCGCCCGGGCCGCG
GGGCCGCGTACATCTTCTCCAAATCCATTGCGATCCTGGAGGAGTCGGTGGAAGGAAACAGGAAAAGTTTGTCCGTAGT
GTGCTGCTGCCTGCCTCTCGCCCTTCCTTCCNTTTTNCTTTTAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Unlabeled
 
7-12
stage 8
stage 10
stage 11
stage 11
stage 11
stage 11
stage 11
Brainstem Nuclei
Hindbrain
 
13-18
stage 17
stage 18
Brainstem Nuclei
Forebrain
Isthmus/MHB
Midbrain
 
19-24
stage 21
stage 21
stage 22
stage 22
stage 24
stage 24
stage 24
Forebrain
Isthmus/MHB
Midbrain
Spinal Cord
 
25
stage 25
Forebrain
Midbrain
Spinal Cord
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.400

Mouse

EmageMGI:97489
EurexpressMGI:97489
MGI GXDMGI:97489

Frog

Xenbase479875

Fruit Fly

BDGP

Zebra Finch

ZEBrAPAX5

Zebrafish

ZFINZDB-GENE-001030-2
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