GEISHA - A Chicken Embryo Gene Expression Database
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HS6ST1
heparan sulfate 6-O-sulfotransferase 1

Gene
Official SymbolHS6ST1
Official Full Nameheparan sulfate 6-O-sulfotransferase 1
CGNC ID13757
also known asCHS6ST-1, heparan-sulfate 6-O-sulfotransferase 1|HS6ST-1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_204482
PolypeptideNP_989813
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9394ENSG00000136720MIM:604846
Mouse50785ENSMUSG00000045216All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(2) Gene trapped(2) MGI:1354958
Xenopus550071, 373566953844
Zebrafish791107, 553162ENSDARG00000071501ZDB-GENE-070103-2, ZDB-GENE-050524-1ZFIN:ZDB-GENE-070103-2, ZFIN:ZDB-GENE-050524-1
Gene Ontology
Molecular Functionsulfotransferase activity
Biological Processangiogenesis, heparan sulfate proteoglycan biosynthetic process, more...labyrinthine layer blood vessel development, limb development, lung alveolus development, neuron development
Cellular Componentintegral component of membrane
Links to other databases
Entrez Gene395141
Ensembl GeneENSGALG00000002155
KEGGgga:395141
GEISHA IdHS6ST1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCCCCGTATCTCGTTACCTCAGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCTTCCCGATTCTTTATCCTCTGCcDNA Template Length572
Forward cDNA Template Probeshow
CATCCTCTCTAGCTGCCGTTTGTACTGATAGCGCTGCTGGAAAGAGGTCCTTTGCATAGTCGTAGAGCTGCATGTCCAG
GTCATTGAGCTCCTCGATCCTGCGGATGGTGTCATTGTCCACCTCCACCCCTCCTGCCCTGGTGCTGTTGTACTGCATG
AAGGGCCGGATGAATTTCAGGTTAAAAGTTCTCTCAAACAGGTACTGAGTCTTTCTCTGGAACTCTGTCAGGCCGAAGA
AGGCCATGTCTTTGAGGTTCTTTTTTGCGCTCTCCAGCAGGATCTGTGCTCGCTTGTTCTCTGGGATGAAAGACATGTT
GTAGCAGCCCACCAGGCTCAAGTCGGCCAACATCCTCACCTGGCGGTTATTGGCCAAGTTATAGGGGCAATCCATGAAC
TCCTGCAGCGTGCAGCCTGACCAGTCCGTGCCCTCATAGCACGATGGCAGCTCTTCGGGAGTCGGCGTCCTGCCATCAC
ACATGTGCAAGGAGGTCTTCCAGGTGGCTCCTCGCTGGACGTGCCGCCATTCGCTGAGGTAACGAGNATACGGGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
Extraembryonic Mesoderm
 
7-12
stage 8
stage 8
stage 9
stage 10
stage 10
stage 11
stage 11
stage 12
stage 12
stage 12
stage 12
Amnion
Area Opaca
Blood Islands
Ear/Otic Placode
Ectoderm
Extraembryonic
Eye
Forebrain
Head Mesenchyme
Headfold
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Sinus Venosus
Spinal Cord
 
13-18
stage 17
stage 18
stage 18
stage 18
Eye
Foregut
Intermediate Mesoderm
Liver
Nephric Ducts
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
Spinal Cord
 
19-24
stage 22
stage 22
stage 24
stage 24
stage 24
stage 24
Facial Muscles
Forebrain
Hindbrain
Leg Mesenchyme
Liver
Mesonephros
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Wing Mesenchyme
 
25-27
stage 27
  

Mouse

EmageMGI:1354958
MGI GXDMGI:1354958

Frog

Xenbase953844

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070103-2, ZDB-GENE-050524-1
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