GEISHA - A Chicken Embryo Gene Expression Database
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EBF3
early B cell factor 3

Gene
Official SymbolEBF3
Official Full Nameearly B cell factor 3
CGNC ID7959
also known astranscription factor COE3, COE3, Early B-cell factor 3, Olf-1/EBF- like 2, OE-2 (O/E-2), Transcription factor COE3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_421824
PolypeptideXP_421824
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.52017
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish557777ENSDARG00000069196
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395175
Ensembl GeneENSGALG00000010461
KEGGgga:395175

Entry 1

GEISHA IdEBF3.Mella.2004Data SourcePublication
Complete cDNA Template Probeshow
CGGATTTCTCTCTGCTTCCCCGCAGGAGTGAGGACGGAGCAGGACCTCTACGTGCGCCTCATAGACTCCATGACCAAAC
AGGCGATCGTGTACGAGGGGCAGGACAAGAACCCCGAGATGTGCCGGGTGCTGCTCACGCACGAGATTATGTGCAGCCG
ATGCTGTGACAAGAAAAGTTGTGGCAACAGAAACGAGACCCCCTCCGACCCCGTTATCATTGACAGATTCTTTCTAAAG
TTTTTCCTCAAGTGCAATCAGAACTGTTTGAAGAATGCAGGCAACCCACGAGACATGCGAAGATTCCAGGTTGTTGTAT
CAACAACAGTCAATGTGGATGGCCACGTTCTGGCTGTCTCAGACAACATGTTTGTACACAACAATTCCAAACACGGAAG
GCGGGCTCGCCGCCTTGACCCCTCAGAAGGTACGGCTCCTTCTTATCTGGAAAATGCTACTCCGTGCATAAAGGCCATC
AGTCCTAGTGAANGCTGGACTACTGGTGGGGCCACTGTCATCATAATCGGAGACAACTTCTTTGATGGCTTACAAGTCG
TATNNGGGACTATGTNGGTCTGGAGTGAGCTGATACACCCCATGCCATCAGAGTNAGACACCGNCACGGCACATTTCAG
GGGGGTTGTGNANGTG
CitationMella S, Soula C, Morello D, Crozatier M, Vincent A. Expression patterns of the coe/ebf transcription factor genes during chicken and mouse limb development. Gene Expr Patterns. 2004 Sep;4(5):537-42.
CopyrightReprinted with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (AY491058). Accession given in paper.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-29
stage 29
stage 29
Leg
Leg Mesenchyme
Figure 3 compares the expression patterns of c-ebf1-3 and scx in hindlimb of E6 (HH stage 29) chicken embryos.

Entry 2

GEISHA IdEBF3.Anderson.2020Data SourceDirect Submission
Complete cDNA Template Probeshow
TTGCAGAAAGTTATTCCACGACATCCAGGTGATCCCGAAAGGTTACCAAAGGAAGTATTACTTAAGAGAGCAGCAGACC
TTGTGGAAGCCCTATATGGGATGCCCCATAACAACCAGGAAATAATTCTGAAACGAGCAGCTGACATTGCTGAAGCATT
ATACAGCGTGCCACGCAATCACAACCAGATTCCTACTCTAGCCAACACTCCTGCTCATACTGGCATGATGGGAGTGAAC
TCGTTTAGCAGCCAGCTAGCAGTCAATGTTTCAGAAACATCACAAGCTAACGACCAAGTAGGTTACAGTCGCAACACAA
GCAGTGTTTCCCCGCGAGGATATGTTCCGAGCAGTACTCCTCAGCAGTCCAATTACAACACAGTCAGCAATAGCATGAA
TGGATATGGCAATGCCGGCATGCCCAATCTAGGTGTACCAGGTTCCCCTGGATTTCTTAATGGCTCCTCAGCTAACTCT
CCTTATGGCATGAAACAAAAGAGCGCCTTTGCTCCTGTTGTCAGGCCCCAAGCCTCTCCTCCACCATCTTGCACCAGTG
CAAATGGAAATGGACTTCAAGCTATGTCCGGGCTTGTAGTCCCGCCAATGTAAAGTCATTTTGTTTACCTACCGTAGCA
CCAAGCTTCAAGGATGGGCTTAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTGTCTTCAAACAGAAT
CAGCAACAAATCGAAATGCTACAAAAAAAAAAAAAA
CommentsImages and probe sequence provided by Claire Anderson. The probe was from cDNA clone AY491058T (Mella et al. 2004). Above sequence was extracted from NCBI accession XM_015289034.2. Sébastien Mella, Cathy Soula, Dominique Morello, Michèle Crozatier, Alain Vincent. Expression patterns of the coe/ebf transcription factor genes during chicken and mouse limb development. Gene Expr Patterns. 2004. Sep;4(5):537-42.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
stage 12
stage 12
Amnion
Aorta
Blood Vessels
Dermomyotome
Ear/Otic Placode
Ectoderm
Extraembryonic Blood Vessels
Eye
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Midbrain
Myocardium
Neural Plate/Tube
Sclerotome
Splanchnic Mesoderm
rostral dorsal mesenchyme
section 16
section 3
section 71
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.52017

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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