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OTX2 orthodenticle homeobox 2 The human orthologue of this gene is associated with the following human diseases:
Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol OTX2 Official Full Name orthodenticle homeobox 2 CGNC ID 14164 also known as homeobox protein OTX2|orthodenticle homolog 2, homeobox protein OTX2 , Otx2
, orthodenticle homeobox 2 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id Otx2 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show CATGGTTTTTTTTTCACACACCAACATTTATTCCAAGACACGTTACAGCTGGGAAGAGGCGCACACGTTTCACTCCTGG CTCTCAGGCAAAACATCACAGATCAGCCCCTTCCAGGCCCCATAGCAGCCCCTTCCAGGCCCCATAGCAGCCCCTTCCA GGCCCCATAGCAGCCCCTTCCAGGCCCCCCACAAAGGCTCGGGCACTTCTAACAAGCTTCCAAGCCACCCCCAAACAAG CATCCTGCCCACAAGGCACCGTTCCCCACACACTGGGACCCACCCTGGGTCAGAAACGCAGCTCCTGCCCTGCCCCACA GCACCCACAAGCAGAGCGCTGCCATCCAGCTGTGCTCAGAGCTGTTAGGGTCGCTGAATTTGGAGAGGACCCGACCGGC GGCTATGCCCCCCGCGCCCCCCAGCCGTGCCAGCGGCCCCGCAGGCACCTGGCGGCCCCCCCCTCCGCCCGACGGCACC CCCAGCACCGCCCGGGGCAGGCAGGGCGCTCGGGCGGACCCCCCTCGCCCGGATTTCGGCCAACTCTCCTCCCCGCTCC AACTTTAGCATGATGTCTTATCTTACGCAACCACCTTACGCAGTCATTGGCTTGAGTTTCACCACTTCGGGCATGGATT TGTTGCATCCGTCAGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACCACCTTCACCCGGGCGCAGCT GGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGGAGGTGGCCTTGAAAATCAAC CTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCAGCAGCAGCAGCAGCAGAACG GGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGCTCGGAGAGCGGGACCAGCGG GCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCGTGTCCATCTGGAGCCCGGCG TCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAAGTCCTACCCCATGACCTACACCCAGG CATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGTGGATCTTATTTGACCCCTAT GCACCACCAGCTCCCCGGACCGGGGGCCACCCTGATTCCCATGGGTGCCAATGCGGTCACCAGCCACCTCAACCATTCT CCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCATTTTGGGCTTTAACTCAACCACCGATTGCTTGGATTATAAAA ACCAAACCGCTTCTTGGAATTTAAACTTCAATGCTGACTGCTTGGATTATAAAAACCAAACTTCCTCATGGAAGTTCCA GGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATTGTGACGAGAACAAAACACGCTGGGCCCGAACGT TCCAGCTTTAGTCAGGTTTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGACAAACAAATGAACATAAATC CGACGACGACAACAACGGGGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTCATCTCCTGCTCAGACGCTC TGGAAAAGGAACGACAAAGAGGAAAACGGAGGAGGAAGGCCTTTAAAACGGACAGAATCATTTAGTGAGGCAGAAAACC GGACAGACCAATCCGTGTTCTTTAATAGTTTTAGGCAATTTGTTGGGGTTTCTTTTGTTTGGAAGAGGTGGGAGATCGT TCCCACCTATGGGCCAGTTTTTAAACAAAAAAAAAAAAGTCTAGGTTTTTATTTCTTTTTGTGTGTGCGTGGAAAGATC CTTCACCCAGAGGTTTCCAACGTCTTAGCCAACCCTTGGTTAAAATATTCGGAATGGACAGCGTCTCTCTTTCTCTTTT TCTCCCCTTTTTTCTCCCTCCTTCCCTCCCTCTTTCTTTCTCTCTCGCGCTCATCCAACTGTTTGACGCCCAACTCAAG TGGGCACCGAGAGAACTTGGTTCAGGGCTGTGTGGGTTGTGTGACTGATTGTCCTAGCTGCACTACTTTATTTAAAGAA AAAAAAAATAATGTTCATAAGGAGTCAATATGTAGTTTTTAAGAGACAATCAGTGTGTGTCTTATATAAATGGTACATC TGTGGTTTTTAATCTGTGCTAGACTTCAAAACTGTGATCTCCTGTATTGTATGCAACTACGAACTCCGCACCAGCGGGA GTTCCGCTGTGATTTAAATAGGTTATAATTATAAGTGAAATTCAGAGCAACTGAGTTACCTATTATCATCTTTCTAAAA A
Comments Images provided by Susan Chapman
Entry 2 GEISHA Id Otx2.Chapman.2002 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Chapman SC, Schubert FR, Schoenwolf GC, Lumsden A. Analysis of spatial and temporal gene expression patterns in blastula and gastrula stage chick embryos. Dev Biol. 2002 May 1;245(1):187-99. Copyright 2002 Elsevier Science (USA). All rights reserved.
Entry 3 GEISHA Id OTX2.Ohuchi.2007 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Ohuchi H, Hayashibara Y, Matsuda H, Onoi M, Mitsumori M, Tanaka M, Aoki J, Arai H, Noji S. Diversified expression patterns of autotaxin, a gene for phospholipid-generating enzyme during mouse and chicken development. Dev Dyn. 2007 Apr;236(4):1134-43. Copyright Copyright © 2007 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204520).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-15 stage 15
Diencephalon Midbrain
Entry 4 GEISHA Id Otx2.Abe.2006 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Abe Y, Chen W, Huang W, Nishino M, Li YP.
CNBP regulates forebrain formation at organogenesis stage in chick embryos. Dev Biol. 2006 Jul 1;295(1):116-27. Epub 2006 Apr 19. Copyright Reprinted from Developmental Biology, 295, Yoko Abea, Wei Chena, Wei Huangc, Mizuho Nishinod and Yi-Ping Li, CNBP regulates forebrain formation at organogenesis stage in chick embryos, 116-127, Copyright 2006, with permission from Elsevier.
Copyright © 2006 Elsevier B.V. All rights reserved. Comments As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204520)
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-21 stage 19
stage 19
stage 21
Forebrain Midbrain
Entry 5 GEISHA Id Otx2.vonFrowein.2006 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Comments Authors said "Plasmid templates were used to generate digoxygenin antisense riboprobes: Otx2 (Wassef et al., 1987). However, no Otx2 clone is listed in this paper. As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204520).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
stage 22
Forebrain 25-28 stage 28
Forebrain
Entry 6 GEISHA Id Otx2.Sanchez-Calderon.2007 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Sánchez-Calderón H, Francisco-Morcillo J, Martín-Partido G, Hidalgo-Sánchez M (2007). Fgf19 expression patterns in the developing chick inner ear.Gene Expr Patterns. Jan;7(1-2):30-8. Epub 2006 May 19. Copyright Copyright © 2007 Elsevier B.V. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204520).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 15
stage 15
Ear/Otic Placcode 19-24 stage 20
stage 20
stage 24
stage 24
stage 24
Ear/Otic Placcode
Entry 7 GEISHA Id Otx2..Badde.2005 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Badde A, Bumsted-O'Brien KM, Schulte D. Chick receptor protein tyrosine phosphatase lambda/psi (cRPTPlambda/cRPTPpsi) is dynamically expressed at the midbrain-hindbrain boundary and in the embryonic neural retina. Gene Expr Patterns. 2005 Aug;5(6):786-91. Copyright Copyright © 2005 Elsevier B.V. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204520).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-16 stage 15
stage 15
stage 15
stage 16
Forebrain Midbrain
Entry 8 GEISHA Id Otx2.Chapman.2008 Data Source Direct Submission Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Comments Insufficient information provided to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204520).
Images Provided by Susan Chapman.
Entry 9 GEISHA Id OTX2.Agarwala.2005 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Agarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21. Copyright Copyright © 2005 Elsevier Inc. All rights reserved. Comments According to the authors, "Digoxigenin
(DIG)- and fluorescein-labeled riboprobes were synthesized from chick cDNA plasmids..." As information provided was insufficient to verify exact sequence used to synthesize probe,the sequence below was obtained from NCBI (NM_204520).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-26 stage 26
Isthmus/MHB
Entry 10 GEISHA Id Otx-2.Albazerchi.2007 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Albazerchi A, Stern CD. A role for the hypoblast (AVE) in the initiation of neural induction, independent of its ability to position the primitive streak. Dev Biol. 2007 Jan 15;301(2):489-503. Copyright Reprinted with permission from Elsevier.
Copyright © 2007 Elsevier B.V. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_204520.2).
Although experiments are shown, normal expression can be seen in the embryo to the left.
Entry 11 GEISHA Id OTX1.Plouhinec.2005 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Plouhinec JL, Leconte L, Sauka-Spengler T, Bovolenta P, Mazan S, Saule S (2005). Comparative analysis of gnathostome Otx gene expression patterns in the developing eye: implications for the functional evolution of the multigene family. Dev Biol. 2005 Feb 15;278(2):560-75. Copyright Copyright © 2004 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify sequence used to synthesize probe. NCBI lists Otx1 as a conserved domain in Otx2. Sequence below was obtained from NCBI (NM_204520).
Entry 12 GEISHA Id OTX2.Plouhinec.2005 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Plouhinec JL, Leconte L, Sauka-Spengler T, Bovolenta P, Mazan S, Saule S (2005). Comparative analysis of gnathostome Otx gene expression patterns in the developing eye: implications for the functional evolution of the multigene family. Dev Biol. 2005 Feb 15;278(2):560-75. Copyright Copyright © 2004 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204520).
Entry 13 GEISHA Id OTX2.Zhang.2001 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Zhang XM, Yang XJ (2001). Temporal and spatial effects of Sonic hedgehog signaling in chick eye morphogenesis. Dev Biol. 2001 May 15;233(2):271-90. Copyright Copyright © 2001 Academic Press. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204520).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
stage 22
stage 24
stage 24
Eye
Entry 14 GEISHA Id OTX2.Foley.2000 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Foley AC, Skromne I, Stern CD. Reconciling different models of forebrain induction and patterning: a dual role for the hypoblast. Development. 2000 Sep;127(17):3839-54.
Copyright Printed in Great Britain © The Company of Biologists Limited 2000 Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204520).
Entry 15 GEISHA Id OTX2.Spieler.2004 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Spieler D, Bäumer N, Stebler J, Köprunner M, Reichman-Fried M, Teichmann U, Raz E, Kessel M, Wittler L. Involvement of Pax6 and Otx2 in the forebrain-specific regulation of the vertebrate homeobox gene ANF/Hesx1. Dev Biol. 2004 May 15;269(2):567-79. Copyright Copyright © 2004 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204520).
Entry 16 GEISHA Id OTX2.Bok.2005 Data Source Publication Complete cDNA Template Probe show CAAATGGACAAACAAATGAACATAAATCCGACGACGACAACAACGGGGACAAAAGAGGGACAGTGTTGGTGTGACCACG TTCAGACTCATCTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAGAGGAAAACGGAGGAGGAAGGCCTTTAAAACGG ACAGAATCATTTAGTGAGGCAGAAAACCGGACAGACCAATCCGTGTTCTTTAATAGTTTTAGGCAATTTGTTGGGGTTT CTTTTGTTTGGAAGAGGTGGGAGATCGTTCCCACCTATGGGCCAGTTTTTAAACAAAAAAAAAAAAGTCTAGGTTTTTA TTTCTTTTTGTGTGTGCGTGGAAAGATCCTTCACCCAGAGGTTTCCAACGTCTTAGCCAACCCTTGGTTAAAATATTCG GAATGGACAGCGTCTCTCTTTCTCTTTTTCTCCCCTTTTTTCTCCCTCCTTCCCTCCCTCTTTCTTTCTCTCTCGCGCT CATCCAACTGTTTGACGCCCAACTCAAGTGGGCACCGAGAGAACTTGGTTCAGGGCTGTGTGGGTTGTGTGACTGATTG TCCTAGCTGC
Citation Bok J, Bronner-Fraser M, Wu DK. Role of the hindbrain in dorsoventral but not anteroposterior axial specification of the inner ear. Development. 2005 May;132(9):2115-24. Epub 2005 Mar 23. Copyright Copyright for articles in Development are retained by the authors. Permission granted by MBF. Comments According to the authors, "A 562 bp of 3′-untranslated region (nucleotides 1183-1745) of chicken Otx2 (GenBank: AJ489221) was used to generate an antisense probe for Otx2." Sequence below was obtained from NCBI using this information.
no images
Entry 17 GEISHA Id OTX2.Sanchez-Calderon.2004 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Sánchez-Calderón H, Martín-Partido G, Hidalgo-Sánchez M. Otx2, Gbx2, and Fgf8 expression patterns in the chick developing inner ear and their possible roles in otic specification and early innervation. Gene Expr Patterns. 2004 Oct;4(6):659-69. Copyright Reprinted with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204520.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-30 stage 27
stage 27
stage 27
stage 27
Ear/Otic Placode 31-34 stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
Ear/Otic Placode
Entry 18 GEISHA Id OTX2.Sanders.2002 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Sanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50. Copyright Copyright © 2002-2011 by the Society for Neuroscience Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc# NM_204520.2)
Entry 19 GEISHA Id OTX2.Halilagic.2007 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Halilagic A, Ribes V, Ghyselinck NB, Zile MH, Dollé P, Studer M. Retinoids control anterior and dorsal properties in the developing forebrain. Dev Bio 2007 Mar 1;303(1):244-58 Copyright Reprinted with permission from Elsevier.
Copyright © 2007 Elsevier B.V. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204520.2). Images are quail, but sequence and map shown are chick.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 14
stage 14
Eye 19 stage 19
Retina
Entry 20 GEISHA Id OTX2.Tossell.2011 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Tossell K, Kiecker C, Wizenmann A, Lang E, Irving C.
Notch signalling stabilises boundary formation at the midbrain-hindbrain organiser. Development. 2011 Sep;138(17):3745-57. Epub 2011 Jul 27.
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204520.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 9
stage 9
stage 9
stage 9
stage 9
stage 10
stage 10
stage 10
stage 10
stage 10
Isthmus/MHB Mesencephalon Midbrain Rhombomeres
Entry 21 GEISHA Id OTX2.Tossell.2011B Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Tossell K, Andreae LC, Cudmore C, Lang E, Muthukrishnan U, Lumsden A, Gilthorpe JD, Irving C.
Lrrn1 is required for formation of the midbrain-hindbrain boundary and organiser through regulation of affinity differences between midbrain and hindbrain cells in chick. Dev Biol. 2011 Apr 15;352(2):341-52.
Copyright Copyright © 2011 Elsevier Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204520.2).
no images
Entry 22 GEISHA Id OTX2.Lorente-Cánovas.2012 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Lorente-Cánovas B, Marín F, Corral-San-Miguel R, Hidalgo-Sánchez M, Ferrán JL, Puelles L, Aroca P. Multiple origins, migratory paths and molecular profiles of cells populating the avian interpeduncular nucleus. Dev Biol. 2012 Jan 1;361(1):12-26. Copyright Copyright © 2011 Elsevier Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204520.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-30 stage 27
stage 27
stage 27
stage 29
Rhombomeres 31-39 stage 36
stage 36
stage 39
Rhombomeres
Entry 23 GEISHA Id OTX2.Acloque.2011 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Hervé Acloque, Oscar H. Ocaña, Ander Matheu, Karine Rizzoti, Clare Wise, Robin Lovell-Badge, M. Angela Nieto Reciprocal Repression between Sox3 and Snail Transcription Factors Defines Embryonic Territories at Gastrulation. Dev Cell. 2011 September 13; 21(3): 546558. Copyright Copyright © 2011 Published by Elsevier Inc. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204520.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 4 stage 4
stage 4
Neural Plate/Tube
Entry 24 GEISHA Id OTX2.Adams.2000 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Adams KA, Maida JM, Golden JA, Riddle RD. The transcription factor Lmx1b maintains Wnt1 expression within the isthmic organizer. Development. 2000 May;127(9):1857-67. Copyright Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Comments As insufficient information is provided in the publication to verify the exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (acc # NM_204520.2).
Entry 25 GEISHA Id OTX2.Hirashima.2008 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Hirashima M, Kobayashi T, Uchikawa M, Kondoh H, Araki M. Anteroventrally localized activity in the optic vesicle plays a crucial role in the optic development. Dev Biol. 2008 May 15;317(2):620-31. doi: 10.1016/j.ydbio.2008.03.010. Epub 2008 Mar 20. Copyright Copyright © 2008 Elsevier Inc. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI EF410002.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-11 stage 11
stage 11
Eye
Entry 26 GEISHA Id OTX2.Miyazaki.2006 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Miyazaki H, Kobayashi T, Nakamura H, Funahashi J. Role of Gbx2 and Otx2 in the formation of cochlear ganglion and endolymphatic duct. Dev Growth Differ. 2006 Sep;48(7):429-38. Copyright Copyright © 19992013 John Wiley & Sons, Inc. All Rights Reserved.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 11
13-18 stage 14
19-22 stage 20
stage 22
stage 22
stage 22
stage 22
Entry 27 GEISHA Id OTX2.Marcucio.2005 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Marcucio RS, Cordero DR, Hu D, Helms JA. Molecular interactions coordinating the development of the forebrain and face. Dev Biol. 2005 Aug 1;284(1):48-61. Copyright Copyright © 2005 Elsevier Inc. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204520.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-22 stage 22
Hypothalamus Telencephalon all
Entry 28 GEISHA Id Otx2.Jungbluth.2001 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Stefan Jungbluth, Chris Phelps, Andrew Lumsden. CEPU-1 expression in the early embryonic chick brain. Mech Dev. 2001 Mar;101(1-2):195-7. Copyright Copyright © 2001 Elsevier Science Ireland Ltd. Comments Authors indicated that Otx2 probe was a gift of A. Simeone. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession NM_204520.2).
Entry 29 GEISHA Id Otx2.Hidalgo-Sánchez.1999 Data Source Publication Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Citation Hidalgo-Sánchez M, Millet S, Simeone A, Alvarado-Mallart RM. Comparative analysis of Otx2, Gbx2, Pax2, Fgf8 and Wnt1 gene expressions during the formation of the chick midbrain/hindbrain domain. Mech Dev 1999 Mar;81(1-2):175-8. Copyright Copyright © 1999 Elsevier Science Ireland Ltd. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession NM_204520.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 10
stage 10
Midbrain 19-20 stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
Midbrain
Entry 30 GEISHA Id OTX2.Trevers.2023 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show CCAACTCTCCTCCCCGCTCCAACTTTAGCATGATGTCTTATCTTAAGCAACCACCTTACGCAGTCAATGGCCTGAGTCT CACCACCTCGGGCATGGATTTGTTGCATCCGTCCGTCGGTTATCCCGCCACCCCCCGAAAGCAGCGGCGGGAGCGCACC ACCTTCACCCGGGCGCAGCTGGACGTGCTGGAGGCCCTGTTCGCCAAGACCCGCTACCCCGACATCTTCATGCGGGAGG AGGTGGCCTTGAAAATCAACCTGCCCGAGTCCAGAGTGCAGGTGTGGTTCAAAAACCGCCGGGCCAAGTGCCGGCAGCA GCAGCAGCAGCAGCAGAACGGGGGCCAGAACAAGGTGAGGCCGGCCAAAAAGAAGAACTCGCCGGCCCGGGAAGTGAGC TCGGAGAGCGGGACCAGCGGGCAGTTCACACCCCCCTCCAGCACCTCGGTCCCCACCATTTCCAGCAGCAGTGCCCCCG TGTCCATCTGGAGCCCGGCGTCCATCTCCCCGCTCTCCGATCCCCTGTCCACTTCTTCCTCCTGCATGCAGAGGTCCTA CCCCATGACCTACACCCAGGCATCAGGTTACAGCCAAGGATATGCCGGCTCGACCTCCTATTTCGGAGGGATGGACTGT GGATCTTATTTGACCCCTATGCACCACCAGCTCCCCGGACCGGGGGCCACCCTGAGTCCCATGGGTGCCAATGCGGTCA CCAGCCACCTCAACCAGTCTCCAGCCTCCCTCTCCACCCAGGGCTATGGAGCCTCCAGTTTGGGCTTTAACTCGACCAC CGATTGCTTGGATTATAAAGACCAAACCGCCTCCTGGAAGTTAAACTTCAATGCTGACTGCTTGGATTATAAAGACCAG ACATCCTCATGGAAGTTCCAGGTTTTGTGAAGGCCCGTGGGAACCTTTGTGATAATAAGAGAAATCGTGACGAGAACAA AACACGCTGGGCCGAACGCTCCAGCTTTAGTCAGGTCTTGGTTAAATTAAAGAGAAAATAACTAAATGGACAAATGGAC AAACAAATGAACATAAATCCGACGACGACAACAACGGCGACAAAAGAGGGACAGTGTTGGTGTGACCACGTTCAGACTC ATTTCCTGCTCAGACGCTCTGGAAAAGGAACGACAAAAGAGGAAAACGGAGGAGGAAGGCCTTAAACGGACAGATCATC TAGTGAGCAGAAAACAGACAGACCAATCCGTGTTCTTTATAGTTTTAGGCAATTGTTGGGTTTCTTTGTTTGGAAAAGG TGGGAGATCGTTCCACCTATGGGCCAGTTTTTAAAAAAAAA
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204520 ).
Data from NCBI Unigene EST Profile Unigene ID: Gga.10
Mouse Frog Fruit Fly Zebra Finch Zebrafish