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WFDC1
WAP four-disulfide core domain 1
Gene Summary
Expression
Transcript Levels
Other Species Expression
JBrowse
Gene
Official Symbol
WFDC1
Official Full Name
WAP four-disulfide core domain 1
CGNC ID
4098
also known as
PS20, WAP four-disulfide core domain protein 1|protein ps20
gene type
protein-coding
Genomic Map
Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNA
NM_204554
Polypeptide
NP_989885
Sequence Clusters/ESTs
Unigene
Gene Expression
In Situ Hybridization
GEISHA
EST Profile
Gga.1763
Orthology
Entrez Gene
Ensembl Gene
Genetic Phenotypes
MOD
Fruit Fly
Human
58189
ENSG00000103175
MIM:605322
Mouse
67866
All phenotypic alleles (
3
):Targeted, knock-out(
1
) Targeted, other(
2
)
MGI:1915116
Xenopus
100497322
1011812
Zebrafish
560860
ENSDARG00000058003
ZDB-GENE-070112-352
ZFIN:ZDB-GENE-070112-352
Gene Ontology
Molecular Function
serine-type endopeptidase inhibitor activity
Biological Process
Cellular Component
extracellular region
Links to other databases
Entrez Gene
395238
Ensembl Gene
ENSGALG00000005503
KEGG
gga:395238
GEISHA Id
WFDC1.Trimarchi.2009
Data Source
Publication
Complete cDNA Template Probe
show
CTGATCTAAGTTTGCGGAAAGAAGTTCAACAGCAGCTCCTGGCTTCTGCTCGCGGGCTCCTTTTTTTTTCCTTCCCCCC
TTTCCCTTCCCAGAAGCCGTGCAGCACAGAGCCCTCCAGCGAGCAGCCCTCACGCTCCCTCCCTCTCCTCTCCCTCCCT
CCTTGCCAGCGCTCTGAGCTGCCCGGATCCTGGGAAGCCAGGCTCCCTGCTTGATCTCTCATTGGGAAAATGGATTCCA
GGATGCTGTCAGACCAGCGTTTCTGTAGAAGGATCTTTGCTGCGGCTTTGTGTGTCTTAGTTCTGCTGGCAGACTCGGG
CTGTGCAAGGAATCTCTGGAAACGGGCTCTGCATCTGAAGATGACAGAGAAATACGACGATTATGAGTACCCTCTTCAT
TCTCACAGTGCCCACTACCAGAAGAACGACCGCTGCCCACCGCCTCCCCAGACCTTGCCGGACAGAGCCTGCGAGGTGC
CCAGCTGCCGCTCCGACTCCGAGTGCGAGAGGCACAAGCGCTGCTGCTACAACGGCTGCATCTACGCCTGCCTGGAGTC
TGTGCAGCCACCTCCAGTTTTGGACTGGTTGGTTCAGCCCAAACCCCGCTGGCTGGGAGGAAATGGGTGGCTTTTGGAT
GGTCCAGAGGAAGTCTTACAAGCTGAGGCCTGCAGCACCACTGAGGATGGAGATGAGCCTCTGCATTGCCCCACAGGGT
ATGAGTGCCATATCATCAACCCCGGCAACACAGCTGAAGGAATCCCTAACAGGGGCCAGTGCATCAAGCTCCGTGGAAA
TCCAGATGGACGCAACCTGAGGCATAAGTATTACAAGGAGTATTTTGGCAGCAATTCCAACAATGTGGTTGGCTATGTG
AAAAACCAGCAGAAGCATTTGGGTTAATCAAAAGCGTGCCTGGCTGGACCACTCTATTAAGCAGCTTTCAAGGAATGAT
TTACTCAACAGTTACGTTTTGGAAGAATTCTAGTCCCAAATCTCCACGAGGCCATCTCCAGCATTACCCTGATCCCTGC
CCATCAATGACTTTGATTTTCAAGAAACAGGATGAATCTAGATTTTAAGCCTATCAGCATGGGGAGGAATGTGATCCCT
GAAAGAAACCACACCATTTATGAGCTGCCTTTCCACTGAAGAAATGTAAATACCACGAAGAGAACACCTGCAAACCACA
GTGCCCTTATTGGACTGCTGGCACACAGCCTGCTTTCCACGTGTGTCGTAGGTGACCAATTCAGATTTCACTACCAACA
CAGCTTAAAAGTATAAAAATATTAAGTAACATGACAAAAGCAAGACAAAGACTAAAGGAGCTTTCTGCATCAAGTCCAG
TCCCTGCCTATCTCAGACAACTACTTTGCATAAGTCTTTTCACAGGCATCAAGAAACCTGTAGGTTTCCTCTTTTCCTA
TTTATAGCTGAAATCTTAAGGATGTGGGGAGGCAGGAGAAAAACAGGATTTTTAGATATTTTTTTGAGTTTCTTTCCTT
AAGTTTCTCAGTCTGGTGAATTGTAGGCTGTGAGCTAATGACTAGATTTCTTTCTGCAATATCTAAGCTGTTAGAGACA
CATGTGCCAACGTTTTAAAGTTGTTGTTTTTAGTGACCTGAGTTAATACTCCTAAGTAATGTGTCTGTCCTTTTGTACC
TGCAAAACCTCGGCAGTGAGGCTGAAGTCTGCATTATTTGTACACATCTTAGGAAAGCAGAAGCAGAAAGCAGAAGCAG
GATAAATATGTGTGTTCAAAAGGATTGTCTGGCAGATGGGCTGCTGCTCTCTGGAAGTCCTGTACCTTTATGTCAAATC
CATGAGTCCTTAGGGTCATGTTATTTGTGTTTTGGCCTTACAGCTTTGTGTAGCTGTTTAGCACTACTAAATGGAAAAC
ACATTTTCTGTGAATGTTTTCCATTTCTACAGATGCTCCTAAAGGGATCATAGCATTTCATTCTGACAAATCAGTCAAA
ATTGCTAGGCAAAGGAAGGTATTTTGGCTCCTTTGCTTAGTACATGTCCCCATCTGCACGCGTAAAATCAGCATTTGGA
TATGCAGAATAGTAGCAGTGTTTATAAACACCCAATTCACAAATACAAGTGCTTGCTTCCTCCCACGAACTGTGAGATT
TTTTCCATTCACAGAATGGTTTAAGCCAAAGCTCAGATGCTTATAAAACACTTGATACTTTGCGTATGACATTTGCAGC
TGGAGAGATGCAAGTTTCCAAACTGCTCTTCGTTTCCTTTTGTAAACAGACATGTTCCTCGGTGCTTTATGGAGCAAAA
GAACAGATGGAAGGCTCGACGCTTTCCTAAATCTCTTCATTTGTTGAATTGCCTTCCACTCTCCATTCCTTTGCTCCAA
TTTCTAGCTATTAAATGCAACACCACATTCAGGCAGATCTATTTCTATGATTTTATCCAAGAATATACTTAATTTTAGT
GGACGCATTCACTTGCAGTGGTTGCTGCTTTGTAGCAGGAGGAAGCGCTTACCTGACCACGTTGCTGGATGAGTTGGTA
AGGATATTTTTCCAATTGCAAAGTGTTCCTAATGAACTTCTGTTTACTGGATGTTATCAAAGACATCGCCCTTCCTCGT
GGTGCTATTGTGTTTGTTTCTTCAAATCGATTCTTTTCAAGTTATCCGTTGTCAGACCCGGCAACAGAAGCTCCAGATG
CAGCTTGTATAAATGCTGTGTTCTCAACAGCACTGTCCGTCGTGTGTTGGAAAGGAAGCACACACCAAATGAGTTGTCT
TCGTCTTCTCTTCTCTCCAAAGACAAATAGCTTAGCAACAGTTTCACGAAGCGCAGTAGGAAGTAGCGAATGTAGGTTG
TTTTCCTTATCCCCACGTACACCTTGAAGCGTGTCTGGTGCTACGATTGACTTCACCAGTATCACTGTGTGCTGGCAAC
GCCTGCAGCCTGTTGGATCCTCACGTGCCACTGCTGACATTGCTGGAGCTGCTCTGCCCCATGGGAGCTGAGGACCAGC
AGCAGAGCCGGGTGGACCCTTCCCTATCCATGCATCCCATGCTTGATGAGTGCAGGTTCTGCCACTTTGGTGCTCAATA
AAAACGTGACCAGGATATTT
Citation
Trimarchi JM, Cho SH, Cepko CL. Identification of genes expressed preferentially in the developing peripheral margin of the optic cup. Dev Dyn. 2009 Sep;238(9):2327-9.
Copyright
Dev. Dyn Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved.
Comments
As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204554.1).
Stage
Image (click image to view full size)
Location (click to highlight)
Comments (click to highlight)
19-24
stage 23
Eye
25-30
stage 29
Eye
31-36
stage 34
stage 36
Eye
Retina
Data from NCBI Unigene EST Profile
Unigene ID:
Gga.1763
Mouse
Emage
MGI:1915116
Eurexpress
MGI:1915116
MGI GXD
MGI:1915116
Frog
Xenbase
1011812
Fruit Fly
BDGP
Zebra Finch
ZEBrA
Zebrafish
ZFIN
ZDB-GENE-070112-352
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