Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CENPH
centromere protein H

Gene

Official Symbol	CENPH
Official Full Name	centromere protein H
CGNC ID	10967
also known as	CENP-H, centromere protein H
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204611
Polypeptide	NP_989942
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.944

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	64946	ENSG00000153044		MIM:605607
Mouse	26886	ENSMUSG00000045273	All phenotypic alleles (2):Targeted, other(2)	MGI:1349448
Xenopus	779498			1001497
Zebrafish	567359	ENSDARG00000094892	ZDB-GENE-081104-340	ZFIN:ZDB-GENE-081104-340

Gene Ontology

Molecular Function	kinetochore binding, protein binding
Biological Process	kinetochore assembly
Cellular Component	condensed chromosome kinetochore, nucleus

Links to other databases

Entrez Gene	395316
Ensembl Gene	ENSGALG00000014788
KEGG	gga:395316

Entry 1

GEISHA Id	ChEST166p14	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CATCGACATAATCAAGCTCAACTGGGAAATAATTCAAGCTCATCAGCAAGCACGTGTGATTAGAGAGAATTTGAATGAC ATTAGAAGGAAGATACTTTCTGAAACAGGCCGAAGGAGAGAAGGCGCTGCGAATTTTTACCACAGTGAGGAAAAAAAAG GAAGTAGTCAGAATGAAAATTGCTGAAAAGTTGAAGTTTATCCATAGGAATGTACAGTATGAAAGGAAGGTGACTACGT TAGTTCAAAATATACTCCAGAATATCATAGTCGGATGCCAAATCAACTGGGCGAAAGATCCATCTTTAAGAGCAATTAT TCTACAGCTCGAGAAAGATATCTCCATTCAGAATCTCTTGTAGTTGGGAAGATGGTGTTTGACTGTAGATGTACTTAGT TAATACACTATATCTTGTTTAGTAAAACCACCCTTTCAGCGTGAGATTCCAACCTTTCTGAAATTTCTCTTGTCTACAG ACTCAGAACATAGCCATGCCACTGACTTTTCCAAGGTGATATTGTAACTTGGTAGACAACAGGTATGACAGTACCTATG GTGTAGCTGAGAAAAGGAGCTGCAGAGCCAGCTTACAGCTGTGCTATGCCAAGAATTCATTTCCCCATGAAGTGCAGCA ACAGTACAAGAAATAACCTGTGTGTTATGAGCACTTAGACAGAGGGGCTGACGGTGTGGCCCTGCTTGCTCCTGCACGG AGGAAAGGTGCCCGCGTGGCTCCGTGCCACCAGGCTGTTGGGCACCGTACCCCATGTAGAGCTCAGACTGCACGGTTAA GTATTACCTTATTTTAAACTCTGGATGTTTTCTTGTATGCTCTGAAGGTGTGTCTCTTGAACTGCACGGGGGTTGGTAA GGGTGGAGCACCCCAGGAATTAAATATGGGGGCTGCTGGCTGCAGTCCTCACCTTGGAAAACAGGACCGAAGGTGTAGG GGAGCCACTTTCATGCGTGTGAACGGGGGTCCCACGTCTTTAAACACTGACGAATAGTTGCCTACCTGGATTCGATCGG TAACCGCTTGGTGTTAGACCCAAAAAGGCGTTTCTCCAA
Comments	No expression detected at or before stage 6.

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 6

Unlabeled

7-12

stage 7

stage 8

stage 10

Anterior Neuropore
Midbrain
Neural Plate/Tube
Primitive Streak
Spinal Cord

Dorsal view.
Low level expression.
Ventral view.

13-18

stage 13

stage 14

stage 16

stage 17

Widespread Expression

19-24

stage 20

stage 24

Limb Buds
Widespread Expression

stage 25

Leg
Spinal Cord
Widespread Expression
Wing

Entry 2

GEISHA Id	CENPH.Robb.2012	Data Source	Publication
Complete cDNA Template Probe	show GAATTCGGCACGAGGGGAGCGCGGCTGTTTGAAAGCGAGACATGGCGGGGCGGCTGTCGGAGTCCGTCGGGTCCGGGCC GGGCGCTGAGGCCGAGACGGCGGCCGATCCGGACGCGAAGCGGGACGTCCTGGAGCACCTCTGCGCGAGGACGCATCTG AAGCAGCTGGTGATGGAGTTCGACACCGCGTGCCCCCCCGATGAAGGGTGCAACAGTGGCGCGGAAGTAAACTTTATCG AAAGTGCCAAAGAAACTTTGGAAGAAGTGGGGAAAGTAAAAAGTGCCTTTGAAAGCAAAGCATTAGTCATAAAAAGGAT CCAGCTTATGGATGCTCTGAGAAAGAGAGTGAAAGAAAATGATGGTTGCGCACGACTGATCGTGGAAACAATGAGAGAC ATAATCAAGCTCAACTGGGAAATAATTCAAGCTCATCAGCAAGCACGTGTGATTAGAGAGAATTTGAATGACATTAGAA GGAAAAGATACTTTCTGAAACAGGCCGAAGGAGAGAAGGCGCTGCGAATTTTTACCACAGTGAGGAAAAAAAAGGAAGT AGTCAGAATGAAAATTGCTGAAAAGTTGAAGTTTATCCATAGGAATGTACAGTATGAAAGGAAGGTGACTACGTTAGTT CAAAATATACTCCAGAATATCATAGTCGGATGCCAAATCAACTGGGCGAAAGATCCATCTTTAAGAGCAATTATTCTAC AGCTCGAGAAAGATATCTCCATTCAGAATCTCTTGTAGTTGGGAAGATGGTGTTTGACTGTAGATGTACTTAGTTAATA CACTATATCTTGTTTAGTAAAACCACCCTTTCAGCGTGAGATTCCAACCTTTCTGAAATTTCTCTTGTCTACAGACTCA GAACATAGCCATGCCACTGACTTTTCCAAGGTGATATTGTAACTTGGTAGACAACAGGTATGACAGTACCTATGGTGTA GCTGAGAAAAGGAGCTGCAGAGCCAGCTTACAGCTGTGCTATGCCAAGAATTCATTTCCCCATGAAGTGCAGCAACAGT ACAAGAAATAACCTGTGTGTTATGAGCACTTAGACAGAGGGGCTGACGGTGTGGCCCTGCTGCCTCCCTGCACGGAGGA AAGGTGCCCGCGTGGCTCCGTGCCACCAGGCTGTGGGCACCGTACCCCATGTAGAGCTCAGACTGCACGGCTTAGGTAT AGCCTTATTTTAAACTCTGGATGTTTTCTGTATGCTCTGAAGTGTGTCTCTGCACTGCACGGTGGTTTGCTAGGGTGAG CACCCAGGAATTAAATATGGGCTGCTGCTGCAGTCCCACCTGGAAAACAGGACCGAGGTGAGGGGAGCAGCTTCATGCG TGTGAGCGGTGTCCCACCGCCTTAAGCACTGACGACTACGTGCCTAACCTGCATTCGATCCGCTAAACCTGTCTGCGTG TAACGACCCAAATAAAGCGCTGTTTCTCCTAAAAAAAAAAAAAAAAAAAAAAAACTCGAG
Citation	Robb EA, Antin PB, Delany ME. Defining the Sequence Elements and Candidate Genes for the Coloboma Mutation. PLoS One. 2013; 8(4): e60267.
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204611.1