GEISHA - A Chicken Embryo Gene Expression Database
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NRXN1
neurexin 1

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolNRXN1
Official Full Nameneurexin 1
CGNC ID49297
also known asneurexin-1|neurexin I alpha|neurexin I-beta|neurexin-1-alpha, Neurexin-1-alpha
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001198975
PolypeptideNP_001185904
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9378ENSG00000179915MIM:209850MIM:600565
Mouse18189ENSMUSG00000024109All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:1096391
Xenopus100127647952912
Zebrafish565531, 555686ENSDARG00000061647, ENSDARG00000063635ZDB-GENE-070206-1, ZDB-GENE-070206-3ZFIN:ZDB-GENE-070206-1, ZFIN:ZDB-GENE-070206-3
Gene Ontology
Molecular Functionmetal ion binding
Biological Processangiogenesis, cell adhesion, neurotransmitter secretion, positive regulation of synapse assembly, more...positive regulation of synapse maturation, synapse assembly
Cellular Componentintegral component of membrane
Links to other databases
Entrez Gene395398
Ensembl Gene
KEGGgga:395398
GEISHA IdNRXN1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-GCCAACCACAACAAGGTGTG-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGGCATTGGGCCTCTCTTCGAT-3’cDNA Template Length813
Complete cDNA Template Probeshow
GCCAACCACAACAAGGTGTGTTATGTTGTATTTATGAAATGATTTTTTTTTTTCAGAGAAATGAGAACAGCTTCATAAA
ATCCATTCAAAACTCATTTCATAGATGGTTGTTCACGTATGGCATTCATAAGTCCTCCCACCTTTGCAAGACAGCTGTA
CTCAGGGAAAGGCAGGGTAAGTTATACTGAGGGTCATTACTGGGAGCAAGAGACTTGAGCTGGAGGCAGGAGAGAAGTT
GAAAGCCAGATGGTGGTCAGTACTGAAAGATTTCGATGCTTAAAGAAATGTGGAAAAACAAGAATAAACTGATGGCAGG
AGAGATGGGACATGGCAGAATATGGTTTGGGTGAGACGGAATGGTCTTTTCTGCTTGGTATCGATTGCATTCATGAAAT
AGCATGGTTAGGTCAACTTCCAGGCAGTTTGGTAGATTAGTCTTTAAATAAATCCATACATCAAGGAAAAAAAATTTCT
GCTACTACCATAAGAAGCAAACACAATTTTAATACTGTTTCTGAAGGTTCTCCTTTTTCCTCTTTAATTTTGTAATTTA
ACAAAAAAACAAATATGGATATATCAGAAGTGCCAGCAAGTGGATTTAATATTCCTTTGTGTTTAAAAACAGCAGCAAC
AACAAGCAAACAGACATAAAACAACTACCTAACATAAAATTGGATCCCTACTCTATAATAATCTAATTTGTTTGACTGA
GATGGCTTCATTTCTATGACTGTATTGTGTTGCCTTTTTTAACAAAACACTAAATAATGTGTGAAACTTTCAACCCTAA
GACATCGAAGAGAGGCCCAATGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
Unlabeled
 
13-18
stage 17
Head Mesenchyme
Pharyngeal Arches and Clefts
 
19-24
stage 19
stage 20
stage 21
Head Mesenchyme
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
 
25
stage 25
stage 25
stage 25
stage 25
stage 25
Diencephalon
Ear/Otic Placode
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Mesonephros
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Stomach
Wing Mesenchyme
 

Mouse

EmageMGI:1096391
MGI GXDMGI:1096391

Frog

Xenbase952912

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070206-1, ZDB-GENE-070206-3
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