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Chicken Stage Series
PPARD
peroxisome proliferator activated receptor delta
Gene Summary
Expression
Transcript Levels
Other Species Expression
JBrowse
Gene
Official Symbol
PPARD
Official Full Name
peroxisome proliferator activated receptor delta
CGNC ID
1862
also known as
PPARBETA, peroxisome proliferator-activated receptor delta|peroxisome proliferative activated receptor, delta|peroxisome proliferator-activated receptor beta, peroxisome proliferative activated receptor, delta
gene type
protein-coding
Genomic Map
Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNA
NM_204728
Polypeptide
NP_990059
Sequence Clusters/ESTs
Unigene
Gene Expression
In Situ Hybridization
GEISHA
EST Profile
Gga.262
Orthology
Entrez Gene
Ensembl Gene
Genetic Phenotypes
MOD
Fruit Fly
Human
5467
ENSG00000112033
MIM:600409
Mouse
19015
ENSMUSG00000002250
All phenotypic alleles (
10
):Targeted, knock-out(
5
) Targeted, other(
5
)
MGI:101884
Xenopus
100038152
,
397768
481494
Zebrafish
30750
,
30754
ENSDARG00000044525
,
ENSDARG00000009473
ZDB-GENE-990415-212
,
ZDB-GENE-000112-47
ZFIN:ZDB-GENE-990415-212
,
ZFIN:ZDB-GENE-000112-47
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene
395479
Ensembl Gene
ENSGALG00000002588
KEGG
gga:395479
GEISHA Id
PPARβ.Hojo.2006
Data Source
Publication
Complete cDNA Template Probe
show
CGGGAGCGGGCCATCCCGGGAGATCGCTTTGGTCCCCGGCTCCCCGTGCTGACATGGTAACGGAACGGCGGCTCTCAGC
GGCGGGCAGACAGGGACAGCTGCGGAGAGGCTAGTGCAACTGGCAGGGTCCATCTCGGATAGACGCGGATGATGCCAGA
GCTATGACAGGGATTGCAGTCTTGGCACTGAGGGGTGATCAGTTATGGAACAACTACAGGAGGAAGTACCTGAGGTCAG
GGAAGAGGAGGAGGAAGAGGAAGAGGCAGTGACAGTGCCCAGCGGAGCCTCGGACCCAAGTGCAGGACCAGACAGCTCG
CTGCCCTCGAGCAGCTACACCGACCTTTCGCAGAGCTCCTCTCCCTCCCTGTCAGACCAACTGCAGATGGGCTGCGAGG
AGACGGCCTCGGGGGCACTGAATGTGGAGTGCAGAGTCTGTGGAGACAAAGCCTCGGGCTTCCACTACGGTGTGCACGC
CTGCGAGGGCTGCAAGGGTTTCTTCCGCCGGACGATCCGCATGAAGCTGGAATATGAGAAGTGTGAGCGAAGCTGCAAG
ATTCAGAAGAAGAACCGGAATAAGTGCCAGTACTGCCGCTTCCAGAAATGCCTCTCGTTGGGCATGTCACATAACGCAA
TCCGCTTTGGCCGCATGCCGGAGGCAGAGAAGAGGAAGCTGGTAGCGGGGCTGACAGCAAGCGAGATCAGCTGCCAGAA
CCCACAGGTGGCCGACCTGAAAGCTTTCTCCAAGCACATCTACAACGCCTACCTGAAAAACTTCAACATGACCAAAAAG
AAAGCGAGAGGTATCTTGACCGGGAAGGCCAGCAGCACCCCACAGCCTTTTGTGATCCATGACATGGACACCCTGTGGC
AAGCAGAAAAGGGGCTGGTCTGGAAACAGCTGGTGAATGGGATCCCCCCCTACAAGGAGATCGGGGTGCACGTCTTCTA
CCGCTGCCAGTGCACTACAGTAGAAACTGTGCGGGAGCTCACCGAGTTTGCCAAGAGCATCCCCAGCTTCATAGGCCTC
TACTTGAATGACCAAGTGACTCTGCTGAAGTATGGGGTGCACGAGGCCATCTTTGCCATGCTGGCCTCTATCATGAACA
AGGATGGGCTGCTGGTGGCCAACGGGAATGGCTTTGTGACCCGTGAGTTCCTGCGTACGTTGCGCAAGCCCTTCAACGA
GATCATGGAGCCCAAGTTTGAGTTTGCTGTGAAGTTCAACGCACTGGAGCTGGATGACAGCGACCTGTCTCTGTTTGTG
GCTGCCATTATCCTGTGTGGAGATCGTCCCGGCCTGATGAACGTGAAGCAGGTGGAGGAGATCCAAGACAACATCCTCC
GAGCACTGGAGTTCCACCTGCAGTCCAACCACCCGGACGCCCAGTACCTCTTCCCCAAGTTGCTGCAGAAGATGGCTGA
CCTGCGGCAGCTGGTGACAGAGCACGCCCAGCTGGTGCAGAAGATCAAGAAGACAGAGACAGAGACCTCTCTGCACCCG
CTTCTGCAGGAGATCTACAAGGACATGTACTAAGGACCTCTTATTTATGAGAATGAAGCCATGGATTCCAAGCGAGACT
CTTTGTACAAAAACAAAGAAAACCTTTCCCCATGTCTTCCATTTCTTCTACTGGAAACTCTTTTCTACATGACTCCAAT
GTACGGTACACAGGGCAAGGTGCTGTAAGGTATTGCAGCCACCTCCTGGTAGCTTGGGACTTCCATTAACACACTAACG
AATTTACAAAGGCAAATC
Citation
Hojo M, Takada I, Kimura W, Fukuda K, Yasugi S. Expression patterns of the chicken peroxisome proliferator-activated receptors (PPARs) during the development of the digestive organs. Gene Expr Patterns. 2006 Jan;6(2):171-9. Epub 2005 Dec 1.
Copyright
Reprinted with permission from Elsevier. Copyright © 2005 Published by Elsevier B.V.
Comments
RNA probes were derived from full-length cDNA of PPARβ (1690 nucleotides; Takada et al., 2000). Full length is now listed as 1756nt for NM_204728 with this paper as reference. This is the probe sequence included below.
Stage
Image (click image to view full size)
Location (click to highlight)
Comments (click to highlight)
25-30
stage 28
stage 28
stage 28
stage 28
stage 28
Esophagus
Foregut
Gizzard
Gut
31-44
stage 35
stage 35
stage 35
stage 35
stage 38
stage 38
stage 42
stage 44
stage 44
stage 44
stage 44
Esophagus
Foregut
Gizzard
Gut
PH14 is post hatch 14
PH3 is post hatch 3
PH3 is post hatch 3
Data from NCBI Unigene EST Profile
Unigene ID:
Gga.262
Mouse
Emage
MGI:101884
Eurexpress
MGI:101884
MGI GXD
MGI:101884
Frog
Xenbase
481494
Fruit Fly
BDGP
Zebra Finch
ZEBrA
Zebrafish
ZFIN
ZDB-GENE-990415-212
,
ZDB-GENE-000112-47
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