GEISHA - A Chicken Embryo Gene Expression Database
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MAFF
MAF bZIP transcription factor F

Gene
Official SymbolMAFF
Official Full NameMAF bZIP transcription factor F
CGNC ID9324
also known astranscription factor MafF|nuclear b-Zip protein MafF|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F, Transcription factor MafF , V-maf musculoaponeurotic fibrosarcoma oncogene homolog F
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204757
PolypeptideNP_990088
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.281
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human23764ENSG00000185022MIM:604877
Mouse17133ENSMUSG00000042622All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(4) MGI:96910
Xenopus100488557, 495449489963
Zebrafish393307ENSDARG00000028957ZDB-GENE-040426-1280ZFIN:ZDB-GENE-040426-1280
Gene Ontology
Molecular Functionsequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processin utero embryonic development, regulation of epidermal cell differentiation, more...skeletal muscle cell differentiation, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene395519
Ensembl GeneENSGALG00000012277
KEGGgga:395519

Entry 1

GEISHA IdChEST1004n9Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CTCGAGCCGCCCTTGCTGCATCAGTGGGTGCGTGCAGGAGGGGATGAGTCCATGTGAATGGATGGAGGCAGGGAAACAC
CCCACAGCTCCAAGCTGGCAGGAAAACACAGTGCACCCCATTTTTGGGGGGAGCTGAGCGCAGGGCAGGCGCTCCCAGG
AGCACGTGCCAGAGAGGGAAACGGGGAGAGGGTTTTGCAGAAGGATGAGGGTGAACGGGGTCAGCATTGGCCCAATGAG
AGGGAGTGGAGATGGCAAGAGAACGTGCAGGTCGGAGGGGAACAGAAAGTGGCTGCAGGTTGAGGTGAGCGGGATGGCG
CAGCGCTGTGACAGCAACGGAGGGGGACCCTTGGGCAGGGGGCATCTGGGGGCTGTGAGACAAAAAGGAGACGTGGAGG
GGCCGTTTTCTCCCCATCACACACATCCTTCACGCCTCTTTGTGACCTGAGTGGGACACTCAGCCCAACCGGGTGCCCT
GGAACACAGAGGCAGCGGCAGGAAGGAAGCGGAGGCAGCTGGAGTGCAGATAACTGTTTTGCTGCACACAGCCCTGCTT
GGATGGCCCCACCAAGCCCTGTGCTCCGCTGGCTCCAGGGCTTAGGCTGCACAAAGCGAGGAGACAGAGGCGTGTGAGG
TGTGGAGGGCAGAGCATCCCGCTCCTGGGAGCTGCCTGGCAGGCAGCTTCTCCCTTGGGTTTTCCTCCAGCTTGGACAT
CAGCACAGAGGTCTGGGCATCGCCACGCCAGCCGCCGTCGGCTGCAGCCTCCGTCCTAACCCAGAGAGGTGCCCGCCCA
GAGGGCACTGTGTTAGCATCCCCTCGGTCCCACTCCCCCTGGGTTTATTTATTGCACGAACGTAAGTAATTTTCACGTC
CTCTTTGCCATTCCGCCTCTCGGCACAGCCAGGATGTTGGTACAAAGCCGTACTTTATATTTTATATATGCAAATCACA
TTTTATCNTATATGCGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
stage 5
stage 6
Early Endoderm
Early Mesoderm
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Primitive Streak
 
7-12
stage 8
stage 8
stage 8
stage 9
stage 10
stage 10
stage 11
stage 11
stage 11
Dermomyotome
Endocardium
Extraembryonic Mesoderm
Forebrain
Foregut
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesencephalon
Midbrain
Neural Plate/Tube
Notochord
Pharynx
Primitive Streak
Sclerotome
Somatic Mesoderm
Somites
 
13-18
stage 14
stage 14
stage 15
stage 15
stage 17
stage 18
Dermomyotome
Endoderm
Epicardium
Eye
Forebrain
Foregut
Gut
Head Mesenchyme
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Lens
Limb Buds
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Proepicardium
Somatic Mesoderm
Somites
Trunk Mesenchyme
 
19-24
stage 21
Extraembryonic
Hindbrain
Limb Buds
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Wing
 
25
stage 25
Dermomyotome
Gut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Wing Mesenchyme
 

Entry 2

GEISHA IdMAFF.Lecoin.2004Data SourcePublication
Complete cDNA Template Probeshow
TCGGCTCGGAGCGCGGGGAGCCCTCCCGCCTCGCCGCACCCCTCCCGCGCAGCGCAGCCCGGCGCCGCGACACAGCGCG
GCCTCCGGGCCGGTACGGGGCGACCATGGCTGCGGATGGGCTGTCCAGCAAAGCATTAAAGGTGAAGCGGGAGCTGGGA
GAGAACACGCCGCTGCTGTCGGATGAGGAGCTGATGGGGCTGTCGGTGCGGGAGCTCAACCACCACCTGCGGGGCCTTT
CCAAGGAGGAGGTGGCGAGGCTGAAGCAGCGACGACGGACGCTGAAGAACCGGGGCTACGCTGCCAGCTGTCGAGTGAA
GCGTGTCTGCCAGAAGGAAGAGCTGCAGAAGCAGAAGATGGAGCTGGAATGGGAGGTGGACAAGCTGGCCCGGGAGAAT
GCTGCCATGCGCCTGGAGCTTGACACTCTCCGTGGCAAGTACGAGGCCCTGCAGGGCTTTGCCCGCACTGTGGCTGCCC
ACGGGCCACCTGCCAAAGTGGCCACTGCCAGCGTCATCACCATCGTCAAGTCTGGTGCCAACCAGGCCGCCTACTCCTA
GTGCCGGCCCCGTCCCTCGGCTGGGCACTGTCCCCCCCCCCAGGGCGCCTTCCCCTACGTACCGACTTGAGGCTCTCCT
TTGCTGGGAGCTGCACCCCAAATCCTTCCCTCTGGTCCCCAGACCTCCGCTTGTAGGGAGGACTGCCACCACGTGTGTG
CCGGGTGGGATGGCACCCTACTGGAGATCCTGTGGGGGAAGCCCAAAGCCCGGCACTGCCCCCGTGGTCCCATCCCTTG
CTGCATCAGTGGGTGCGTGCAGGAGGGGATGTGTCCGTGTGAATGGATGGAGGCAGGGAAACACCCCACAGCTCCAAGC
TGGCAGGAAAACCACAGTGCACCCCATTTCTGGGGGGAGCTGAGCGCAGGGCAGGCGCTCCCAGGAGCACGTGCCAGAG
AGGGAAACGGGGAGAGGGTTTTGCAGAAGGATGAGGGTGAACGGGGTCAGCATTGGCCCAATGAGAAGGGGCGGAGATG
GCAAGAGAACGTGCAGGTCGGAGGGGAACAGAAAGTGGCTGCAGGTTGAGGTGAGCGGGATGGCGCAGCGCTGTGACAG
CGATGGAGGGGGACCCTTGGGCAGGGGGCATCTGGGGGCTGTGAGACAAAAAGGAGATGTGGAGGGGCCGTTTTCTCCC
CATCACACACATCCTTCACGCCTCTTCGTGACCTGAGTGGGACACTCAGCCCAACCGGGTGCCCTGGAACACAGAGGCA
GCGGCAGGAAGGAAGCGGAGGCAGCTGGAGTGCAGATAACTGCTGTTTTGCTGCACACAGCCCTGCTTGGATGGCCCCA
CCAAGCCCTGTGCTCCGCTGGCTCCAGGGCTTAGGCTGCACAAAGCGAGGAGACAGAGGCGTGTGAGGTGTGGAGGGCA
GAGCATCCCGCTCCTGGGAGCTGCCTGGCAGGCAGTTCTCCCTTGGGTTTTCCTCCAGCTTGGACATCAGCACAGAGGT
CTGGGCATCGCCACGCCAGCCGCCGTCGGCTGCAGCCTCCGTCCTAACCCAGAGAGGTGCCCGCCCAGAGGGCACTGTG
TTAGCATCCCCTCGGTCCCGCTCCCCCTGGGTTTATTTATTGCACGAACGTAAGTTATTTTCACGTCCTCTTTGCCATT
CCGCCTCTCGGCACAGCCAGGATGTTGGTACAGAGCCGTACTTTATATTTTATATATGCAAATCACATTTTATCTTATA
TAGAGCAAAAAAAAAAAAAAAAAAACCTATTTATTTTCTGACTTACAGTATGTGTCCTACCC
CitationLecoin L, Sii-Felice K, Pouponnot C, Eychène A, Felder-Schmittbuhl MP. Comparison of maf gene expression patterns during chick embryo development. Gene Expr Patterns. 2004 Jan;4(1):35-46.
CopyrightReprinted with permission from Elsevier. Copyright © 2003 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204757).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 5
Early Mesoderm
Epiblast
Hensen's Node
Primitive Streak
Figure 1 compares the expression of maf genes during gastrulation.
7-12
stage 11
stage 11
stage 11
Ear/Otic Placcode
Forebrain
Hindbrain
Isthmus/MHB
Midbrain
Neural Plate/Tube
Somites
Figure 3 displays the differential expressions of maf genes in the head at HH11.
Midbrain/Forebrain Junction
13-18
stage 15
 Figure 7 compares the expression of maf genes in the trunk of E2 chicken embryos.
19-24
stage 19
stage 22
stage 24
Eye
Neural Plate/Tube
Alar plate
Figure 5 compares the expression of maf genes in E4 chicken embryos.
Optic Lobes
25-30
stage 26
stage 26
stage 26
stage 26
stage 26
Leg
Leg Mesenchyme
Limb Buds
Midgut
Retina
Anterior Necrotic Zone
Figure 4 compares the expression of maf genes in the head of E3 to E5 chicken embryos.
Figure 9 compares the expression of maf genes along the digestive tract of HH17 to HH26 chicken embryos.
Ileo-caecal Region
Interdigital Plates
Posterior Necrotic Zone
31-34
stage 34
 Figure 8 compares the expression of maf genes in the developing limb buds of HH22 to HH34 chicken embryos.
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.281

Mouse

EmageMGI:96910
EurexpressMGI:96910
MGI GXDMGI:96910

Frog

Xenbase489963

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-1280
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