GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

VSX2
visual system homeobox 2

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolVSX2
Official Full Namevisual system homeobox 2
CGNC ID7768
also known asCHX10, visual system homeobox 2|ceh-10 homeo domain containing homolog|ceh-10 homeodomain containing homolog|homeobox protein Chx10, VSX2, Homeobox protein Chx10, Ceh-10 homeodomain-containing homolog
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204768
PolypeptideNP_990099
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.289
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human338917ENSG00000119614MIM:610092MIM:142993
Mouse12677ENSMUSG00000021239All phenotypic alleles (10):Spontaneous(3) Targeted, knock-out(1) Targeted, other(6) MGI:88401
Xenopus100493176853774
Zebrafish796163ENSDARG00000005574ZDB-GENE-001222-1ZFIN:ZDB-GENE-001222-1
Gene Ontology
Molecular Functionsequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processcell fate commitment, negative regulation of cell proliferation, more...positive regulation of cell proliferation, positive regulation of transcription from RNA polymerase II promoter, response to stimulus, retinal bipolar neuron differentiation, transcription, DNA-templated, visual perception
Cellular Componentcytoplasm, nucleolus
Links to other databases
Entrez Gene395536
Ensembl GeneENSGALG00000010213
KEGGgga:395536

Entry 1

GEISHA IdVSX2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCGGAAAAAGGGGAGGAAGTG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGTAGAAGGGCAATGTCAGCACGGcDNA Template Length939
Forward cDNA Template Probeshow
CCGAGCTGTGAATACAGCGGGTTTGGCTGCATGGGTCTGCGTGCACACATGGGGTCAGTGATGACACGTATGTACACAT
TACAGTGTGTGCCGGGGGTGCATCTGCATGGTTGTCGTTCCCTTCAGGGCTCAGAAGGAGAGCAGGGCAAATTTACTTC
AATAAATACCTTGGGAAAATGTTGTCTAGCCTGAGAGGCTTTAGCTGTGTGTGGCACTGGCCTCCAAGTGCGTATGGGG
GAGATGATCTTGTAAATACTCCGTAACTGCAACTTTACGTCGTGGCCGCGGCTATGTGGACCTTTCACAGGATCTACCC
AGTCCCTGAATACTGTTTTACCAAAGGTAGATCTTGATCCACATCTTACCCTGTGTGGAAGTGAGTCGCACTACCTTGA
CACACCGATCTCTTTCTAGTTCATACAGGTACTGGCCCAGCATGTATCTCTCGATAAAGCCAAAAACAAGTCTTGGGTA
AAACAAAACTACCTTTTTTTTTCTCTGCTGATAGAATAGAACCTTCCAAAAAAAAACCCCCACACAGAAATACATCTAC
TTGTACCGCACAGATAGTAGATCCAAAAACCTATAGACCTCAATTTAAACATTTCCTGCCTCTCATCATTAATTTCAAG
TAAACACAGATTTTCAAAACATACAATCTAAATTATACACTAATAATGAAAACTCGTTTGAATATACTTACCCTCTAAA
AATACGTACGATTTACTACGTCGCATGTATTATTAGAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
stage 12
Eye
 
13-18
stage 17
stage 18
Eye
Hindbrain
 
19-24
stage 22
stage 23
stage 24
Eye
Neural Plate/Tube
Spinal Cord
 
25
stage 25
Eye
Spinal Cord
 

Entry 2

GEISHA IdChx10.Tomonari.2007Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationTomonari S, Takagi A, Noji S, Ohuchi H. Expression pattern of the melanopsin-like (cOpn4m) and VA opsin-like genes in the developing chicken retina and neural tissues. Gene Expr Patterns. 2007 Aug;7(7):746-53. Epub 2007 Jun 13.
Copyright"Reprinted from Gene Expression Patterns, Volume number 7, Tomonari S, Takagi A, Noji S, Ohuchi H, Expression pattern of the melanopsin-like (cOpn4m) and VA opsin-like genes in the developing chicken retina and neural tissues.,746-53, Copyright (2007), with permission from Elsevier". Copyright © (2007) Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204768).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-14
stage 14
stage 14
stage 14
Eye
Hindbrain
Neural Plate/Tube
Spinal Cord
 

Entry 3

GEISHA IdChx10.Canto-Soler.2006Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationCanto-Soler MV, Adler R. Optic cup and lens development requires Pax6 expression in the early optic vesicle during a narrow time window. Dev Biol. 2006 Jun 1;294(1):119-32. Epub 2006 Mar 27.
CopyrightReprinted from Developmental Biology, 294, Issue 1, M. Valeria Canto-Soler and Ruben Adler, Optic cup and lens development requires Pax6 expression in the early optic vesicle during a narrow time window, 119-132, 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights
CommentsProbes were generated from cDNAs generously provided by the following investigators: Chx10 (Olof Sundin, Johns Hopkins University, Baltimore, MD). As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # AF178671).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
Retina
 
13-18
stage 18
Retina
 

Entry 4

GEISHA IdCHX10.Agarwala.2005Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationAgarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204768).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-26
stage 26
Spinal Cord
transverse section

Entry 5

GEISHA IdCHX10.Plouhinec.2005Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationPlouhinec JL, Leconte L, Sauka-Spengler T, Bovolenta P, Mazan S, Saule S (2005). Comparative analysis of gnathostome Otx gene expression patterns in the developing eye: implications for the functional evolution of the multigene family. Dev Biol. 2005 Feb 15;278(2):560-75.
CopyrightCopyright © 2004 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204768).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 37
stage 40
stage 44
stage 44
Retina
 

Entry 6

GEISHA IdCHX10.Hyre.2003Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationHyer J, Kuhlman J, Afif E, Mikawa T. Optic cup morphogenesis requires pre-lens ectoderm but not lens differentiation. Dev Biol. 2003 Jul 15;259(2):351-63.
CopyrightCopyright © 2003 Elsevier Science (USA) All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204768).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13
stage 13
Eye
Retina
 

Entry 7

GEISHA IdCHX10.Ma.2008Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationMa W, Yan RT, Mao W, Wang SZ. Neurogenin3 promotes early retinal neurogenesis. Mol Cell Neurosci. 2009 Feb;40(2):187-98. Epub 2008 Nov 6.
CopyrightCopyright © 2008 Elsevier Inc. All rights reserved.
CommentsAs insufficient information is provided in the publication to verify the exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (acc #NM_204768).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-32
stage 32
stage 32
stage 32
Retina
 

Entry 8

GEISHA IdCHX10.Li.2008Data SourcePublication
Complete cDNA Template Probeshow
GGCCCTGGTTTCTTCACGTGGGGCTACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTA
CTTCACTCCTCTACTCTTTGGGCTTTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCT
CCAGGTCCCTCTGGTTGCGGTCCTGGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCC
CTTCACCTCACGCCCCATCCCGCTGTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCT
GTGTGTGTGAAACGCTGAGCTACTTGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGT
GGCTGATTTGTGCCTCCATTACGTGAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTC
CAGTGACCTCAGCCTACACCGTCATCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGC
TAGACAACATTTTCCCAAGGTATTTATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATG
CAGATGCACCCCCGGCACACACTGTAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGC
CAAACCCGCTGTACTTCACAGCATCCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCT
GTTTTTATTCTGTCAGAAGTAACCCCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTA
TAGCCCACGCTGTGTAAATAATGTACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationLi X, Glubrecht DD, Mita R, Godbout R. Expression of AP-2delta in the developing chick retina. Dev Dyn. 2008 Nov;237(11):3210-21.
CopyrightCopyright © 2008 Wiley-Liss, Inc.
CommentsThe probe was amplified by PCR using the following primers: 5' -GGCCCTGGTTTCTTCACGTG-3' and 5' -TACAGCTCCATATCTCAAACAC- 3' and was extracted from NCBI Acc#AF178671.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 26
Retina
 
31-41
stage 31
stage 37
stage 41
stage 41
Retina
 

Entry 9

GEISHA IdCHX10.BeleckyAdams.1997Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationBelecky-Adams T, Tomarev S, Li HS, Ploder L, McInnes RR, Sundin O, Adler R. Pax-6, Prox 1, and Chx10 homeobox gene expression correlates with phenotypic fate of retinal precursor cells. Invest Ophthalmol Vis Sci. 1997 Jun;38(7):1293-303.
CopyrightCopyright Association for Research in Vision and Ophthalmology
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #AF178671.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Retina
 
25-30
stage 26
Retina
 
31-44
stage 34
stage 41
stage 41
stage 44
stage 44
Retina
 

Entry 10

GEISHA IdCHX10.Tsukiji.2009Data SourcePublication
Complete cDNA Template Probeshow
GAGAAGTCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATAC
TGTGTCCTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACG
TGGGGCTACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTT
TGGGCTTTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGC
GGTCCTGGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCAT
CCCGCTGTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGA
GCTACTTGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCA
TTACGTGAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACA
CCGTCATCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAA
GGTATTTATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCAC
ACACTGTAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCA
CAGCATCCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAA
GTAACCCCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTA
CitationTsukiji N, Nishihara D, Yajima I, Takeda K, Shibahara S, Yamamoto H. Mitf functions as an in ovo regulator for cell differentiation and proliferation during development of the chick RPE. Dev Biol. 2009 Feb 15;326(2):335-46. doi: 10.1016/j.ydbio.2008.11.029. Epub 2008 Dec 7.
CopyrightCopyright © 2013 Elsevier B.V. All rights reserved.
CommentsThe probe was amplified by PCR using the following primers: 5'- GAGAAGTCCAGTGCATCACAGAAAG -3' and 5'-TACACAGCGTGGGCTATAATCTAAC -3' and was extracted from NCBI Acc# NM_204768.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-22
stage 22
stage 22
stage 22
Retina
 

Entry 11

GEISHA IdCHX10.Hirashima.2008Data SourcePublication
Complete cDNA Template Probeshow
GCCGCAGCATGACGGGCAAAGCGGGCGCGGCGCTGGCCCCCAGCCTGCCTGGCAAGCCCAAGCCCGACGGCGCGGCCGC
CGCCGCCCCGCCGCCGCCGCCCCCCGCGGCGGGAGCCAAGCCCAGCTCCGGGCCCACCCCTCCTCGCTGCACCGGCTTC
GGCATCCAGGAGATCCTGGGCTTGAACAAGGAACCGCCGTCGCACCCGCGGGCCGCCCTGGACTCGCTGCCCGCCGGGC
ACCTGCTGGCGGCCCGCTCCGTCCTCAGCCCCGCCGGGGTGGGCGGCGTGGGCATGGGGCTGCTGGGGGCCGGAGGCAT
CCCCGGCTTCTACGCGCAGCCCACCTTTCTGGAGGTGCTCTCCGACCCGCAGAGCGTCCACCTGCAGCCTTTGGCCCGA
GCCCCCGGGCAGCTGGACAGCAGCCAGACGGCCAGCTCAGATTCCGAGGATGTCTCCTCCAGCGACCGCAAAATGTCCA
AATCTTCCCTCAACCAGAGCAAGAAACGAAAGAAGAGGCGGCACAGGACAATCTTCACATCCTACCAACTGGAAGAGCT
GGAAAAGGCCTTCAATGAGGCTCACTACCCTGATGTGTATGCTAGAGAGATGCTGGCCATGAAAACAGAGCTGCCAGAA
GACAGGATACAGGTCTGGTTCCAGAACCGCCGGGCCAAGTGGCGGAAGCGAGAGAAGTGCTGGGGCCGGAGCAGCGTGA
TGGCTGAGTATGGGCTCTATGGAGCCATGGTGCGCCACTCCATCCCGCTGCCTGAGTCCATCCTCAAGTCAGCCAAGGA
CGGCATCATGGAGTCCTGCGCCCCATGGCTCCTGGGGATGCACAAAAAGTCTCTGGAGGCAGCGGCTGAGGCGGGGAGG
AAGACGGAGGTGGAGCGCCAGGCCCTGCCCAAGCTTGACAAGGGTGACAAGGAAGAGAGGGGCTCGGATCCCAAAACCG
CCATTTCCCAGGAGGAACTGAGAGAAAACAGCATTGCCGCCCTCAGGGCCAAAGCTCAGGAGCACAGCACCAAAGTCCT
GGGGACCATTGCGGGGGACACCCCGAGGAAGCCGGAAAAAGGGGAGGAAGTGGCAGAGGATGAGAGGCAGACAGAGAAG
TCCAGTGCATCACAGAAAGAGGAGAAGCTGATCTAGGGGGACAGAGGCTGCGGAAGCCAGCCCTGACAGATACTGTGTC
CTCTGGGGGTCACAGCCCCTCTGATGGCCAGGCCTGGCACCCACCCAGGGTGTGGGGCCCTGGTTTCTTCACGTGGGGC
TACCCCAAGGGTACCCCAGGCTACCCCAGCCTGCTCCCCTGAAGCGCAGCCTGTACTTCACTCCTCTACTCTTTGGGCT
TTCCTTACCCCAGCCCATCCCCATCTCCATCGTCACCCCAGGGCAGGCTGCGGCTCCAGGTCCCTCTGGTTGCGGTCCT
GGGCCTAGCCTAAGGTACCATCCAGCCCCCTCCAGGCCGGTGAAGCCCAGATCCCCTTCACCTCACGCCCCATCCCGCT
GTGTTCCACACCCCAGGGGACCCCACTGCCCCTGGCACGATGAGCCCATGGCCCTGTGTGTGTGAAACGCTGAGCTACT
TGGCTCTCCCAGCTCAGCACTGACAGCTGCTGGGATGGGGCTGCTGGTTTGGAGTGGCTGATTTGTGCCTCCATTACGT
GAGGAAACGCAGGTTTAGCTTGCAGATGCCATGCCCCGTTCCCAGCTCACAGCTCCAGTGACCTCAGCCTACACCGTCA
TCTCCCCCTATCGCACTCGGAGGCCAGTGCCACACACAGCTAAAGCCTCTCAGGCTAGACAACATTTTCCCAAGGTATT
TATTGAAGTAAATTGCCCTGCTCTCCTTCTGAGCCTGAAGGGAATGACAGCCATGCAGATGCACCCCCGGCACACACTG
TAATGTGTACATACGTCTCCTCACTGACCCATGTGTGCACGCAGACCCACGCAGCCAAACCCGCTGTACTTCACAGCAT
CCCGTGCTGACATTGCCCTTCTATCCCAGCCAGGCACCCTCTCCCCAGAGCTGCTGTTTTTATTCTGTCAGAAGTAACC
CCTTCCATCCAGCCCCATCTGTCTTTGTCCCCCGTTTGTTTGACGTGTTAGATTATAGCCCACGCTGTGTAAATAATGT
ACATACAGTGAGAAAAGAATTCAGTATTGAGGTGTTTGAGATATGGAGCTGTA
CitationHirashima M, Kobayashi T, Uchikawa M, Kondoh H, Araki M. Anteroventrally localized activity in the optic vesicle plays a crucial role in the optic development. Dev Biol. 2008 May 15;317(2):620-31. doi: 10.1016/j.ydbio.2008.03.010. Epub 2008 Mar 20.
CopyrightCopyright © 2008 Elsevier Inc. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204768.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
stage 11
Eye
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.289

Mouse

EmageMGI:88401
EurexpressMGI:88401
MGI GXDMGI:88401

Frog

Xenbase853774

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-001222-1
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona