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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
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NRP1
neuropilin 1

Gene

Official Symbol	NRP1
Official Full Name	neuropilin 1
CGNC ID	5395
also known as	neuropilin-1, neuropilin-1\|A5 protein, NRP1, Neuropilin-1 precursor (A5 protein)
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_204782
Polypeptide	NP_990113

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	8829	ENSG00000099250		MIM:602069
Mouse	18186	ENSMUSG00000025810	All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(4)	MGI:106206
Xenopus	100101701, 397804			480687
Zebrafish	353246, 402973	ENSDARG00000071865, ENSDARG00000027290	ZDB-GENE-030519-2, ZDB-GENE-040611-1	ZFIN:ZDB-GENE-030519-2, ZFIN:ZDB-GENE-040611-1

Gene Ontology

Molecular Function	growth factor binding, heparin binding, metal ion binding, semaphorin receptor activity, more...
Biological Process	angiogenesis, axon guidance, cell adhesion, endothelial cell chemotaxis, organ morphogenesis, more...
Cellular Component	integral component of membrane

Links to other databases

Entrez Gene	395560
Ensembl Gene	ENSGALG00000007140
KEGG	gga:395560

Entry 1

GEISHA Id	ChEST948m8	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GTGCGCTCCTCTTCCTCAGGCTGCGAGCAGGAGCCGCCCGGGCGCTTCCCTTTCCCGGCCGGCACTCCCCGCGGCAGCG CCGCGCTCCCTCGCTCGCTCCCCGCCGGGGCAGAGCCGCCCCGCAGCCCGCCCCGGCAGAGTGCTCCCGAGGTGCCAGC AGCAGCCGCCAGGATTTTTGTCTGTCCTGTTTGTCTGTTTGTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTCTCCTCCT CGTTTTCATTTGGCTTTCTAGTCTCGCTGGGAATGGCCGGGGCAGCGGCGCCAGGAGCGGGAACAAGTGTGGGGAAAGG CAGAGGGAGCCGGAGCTGAACGCCAGGATGCGGGCGAGCTGAGGCTCAGAGCGAGCGGCCAACCTTCCTCTGCCCCCGG GACTGCCCGTGCGAACCGGACCGTGCCTTCTGCTCCCGACTCCGGCCGGAGGATTTAAGACCTAGGAAGAGCTGTGCGT GGAGGGCTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCATTTCCCCGCTCTCGGAAGGGAAAATGGATT GGGGACTTTTTC
Comments	no specific expression detected stage 6

no images

Entry 2

GEISHA Id	Neuropilin-1	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC

Stage

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Location (click to highlight)

Comments (click to highlight)

7-9

stage 7

stage 8

stage 9

Anterior Intestinal Portal
Area Opaca
Blood Islands
Blood Vessels
Head Process
Lateral Plate Mesoderm
Somites

Entry 3

GEISHA Id	Npn1.Lwigale.2007	Data Source	Publication
Forward cDNA Template Probe	show GCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGACAAAGAAAGAATATTACCTGAAAAC ATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGAAACAAGCCTGTTGTGTTTCAAGGG AATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACACGTTTTGTACGAATTAAACCTGTGT CTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGATTATCCTTGCTCTGGGATGCTGGG CATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGATAGAAACTGGATCCCGGAAAATGCT CGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATACAAATGAATGGCTTCAGATAGACC TTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGAAAACAAAGTATTCATGAAAAAATT CAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGCAAGAAAAAGATAAAGACTTTTGAA GGCAACACCAACTACGACACACCT
Citation	Lwigale PY, Bronner-Fraser M. Lens-derived Semaphorin3A regulates sensory innervation of the cornea. Dev Biol. 2007 Jun 15;306(2):750-9. Epub 2007 Apr 18.
Copyright	Reprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
Comments	Authors said: (Npn1; forward 5′-gccttcttcgcttcgtttcg-3′, reverse 5′-aggtgtgtcgtagttggtgttgcc-3'). The amplified probe sequence was extracted from NM_204782.1.

Stage

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Location (click to highlight)

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25-30

stage 26

Cranial Ganglion

31-36

stage 34

stage 36

Cranial Ganglion

Entry 4

GEISHA Id	Np1.Davey.2007	Data Source	Publication
Complete cDNA Template Probe	show TGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGATAGAAACTGGATCCCGGAAAATGCTCGCCTTATA ACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATACAAATGAATGGCTTCAGATAGACCTTGGTGAAG AAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGAAAACAAAGTATTCATGAAAAAATTCAAAATTGG CTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGCAAGAAAAAGATAAAGACTTTTGAAGGCAACACC AACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGAGAATCATCCGCGTCTACCCTGAGAGAGCCACAC ACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGAAGCTCCCACGGCTGTCCCTACTGTTTCCGAAGG CAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGTGGCACAGGTGGAACTACCGTGCTGAACACAGAA AAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGTACAACTTAAACTGTGGCTTTGGCTGGGGATCCC ACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAAGTGGGCAATTCTGACCAGCAAAACTGGGCCAAT TCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGACGAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTG AGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCTGGTACCACATGTCTGGCCCGCATGTTGGCACCC TGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGTGCTGCTGAGCCTGAACGGGCACCAGGCAAACTG CTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTACCAGGTGGTTATAGAGGGAGAAATTGGAAAGGG
Citation	Davey MG, James J, Paton IR, Burt DW, Tickle C. Analysis of talpid3 and wild-type chicken embryos reveals roles fro Hedgehog signalling in development of the limb bud vasculature. Dev Biol. 2007 Jan 1;301(1):155-65.
Copyright	Reprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
Comments	According to authors , "Neuropilin1 (forward primer 5′-TGGGCTCATTCCTGACTC-3′, reverse primer 5′-CCCTTTCCAATTTCTCCCTC 3'). The probe sequence was isolated from NCBI Acc# NM_204782.1 using this information.

Stage

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stage 25

Unlabeled
Wing Mesenchyme

Entry 5

GEISHA Id	Neuropilin1.Riley.2010	Data Source	Publication
Complete cDNA Template Probe	show CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC
Citation	Riley KL, Gledhill S, Schubert FR. Early expression of axon guidance molecules in the embryonic chick mesencephalon and pretectum. Int J Dev Biol. 2010;54(4):743-53.

Stage

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13-18

stage 13

stage 17

Midbrain

19-20

stage 20

Midbrain

Entry 6

GEISHA Id	NRP1.Kubilus.2010	Data Source	Publication
Complete cDNA Template Probe	show TGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGTGGCACAGGTGGA ACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGTACAACTTAAACT GTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAAGTGGGCAATTCT GACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGACGAAAGCCAGAAA GGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCTGGTACCACATGT CTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGTGCTGCTGAGCCT GAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTACCAGGTGGTTATA GAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATATCTCAAGAGGATT GCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTTTACTCCTTCATA CCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAA
Citation	Kubilus JK, Linsenmayer TF. Developmental guidance of embryonic corneal innervation: roles of Semaphorin3A and Slit2. Dev Biol. 2010 Aug 1;344(1):172-84. Epub 2010 May 18.
Copyright	Copyright © 2011 Elsevier B.V. All rights reserved.
Comments	The probe for NRP1 was amplified by PCR using the following primers: Forward Primer: TGTCCCTACTGTTTCCGAAGGCAA Reverse Primer: TTGCCTGGTTTCCTGGAGATGTCA

Stage

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1-3

stage 1

25-30

stage 30

Cranial Ganglia

31-40

stage 40

Cranial Ganglia

Entry 7

GEISHA Id	NPN1.Mauti.2006	Data Source	Publication
Complete cDNA Template Probe	show CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC
Citation	Mauti O, Sadhu R, Gemayel J, Gesemann M, Stoeckli ET. Expression patterns of plexins and neuropilins are consistent with cooperative and separate functions during neural development. BMC Dev Biol. 2006; 6: 32. Published online 2006 July 17.
Copyright	), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204782.1 ).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 18

Spinal Cord

19-24

stage 22

Spinal Cord
Spinal Ganglia and Nerves

25-30

stage 25

stage 30

Spinal Cord
Spinal Ganglia and Nerves

31-40

stage 35

stage 40

Spinal Cord
Spinal Ganglia and Nerves

Entry 8

GEISHA Id	NP1.Herzog.2005	Data Source	Publication
Complete cDNA Template Probe	show CTTTATTTTTATTTTTTATTTTTTTCCTCCATATTTTTTGTCTTTTCCCCGCTCTCGGAAGGGAAAATGGATTGGGGAC TTTTCCTGCACTGCGCAGCCCTCACCTTCACTCTCTCCAGGGCTCTGCGAAGCGATAAATGCGGCGACACGATCAAAAT TCTAAGCCCCGGGTACCTCACCTCCCCCGGCTACCCGCAGTCCTACCACCCCAGCCAGAAGTGCGAGTGGCTGATCCAG GCCCCGGAGCCCTACCAGCGGATCATGATCAACTTCAATCCGCACTTCGACCTGGAGGACCGCGACTGCAAGTATGATT ATGTTGAAGTGATTGATGGAGATAATGCTGAAGGACGCTTATGGGGAAAGTACTGTGGAAAAATTGCTCCTCCTCCTTT AGTGTCTTCGGGACCTTATCTTTTTATTAAGTTCGTTTCCGACTATGAAACGCATGGAGCAGGATTTTCTATCCGTTAT GAAGTTTTCAAAAGAGGACCTGAATGCTCCAGAAACTTTACTTCATCAAGTGGAATGATAAAGTCCCCTGGATTCCCTG AAAAATATCCCAATAGCCTTGAATGCACTTATATTATCTTTGCACCAAAGATGTCAGAGATTATACTGGAATTTGAAAG CTTTGAACTAGAACCTGATTCAAATACTCCAGGGGGAGCATTCTGTCGCTATGACCGATTGGAAATCTGGGACGGATTC CCTGATGTTGGCCCGCACATAGGGCGTTATTGTGGACAGAACAACCCAGGACGCGTCCGCTCTTCAACAGGGATTCTTT CAATGGTATTTTACACTGACAGTGCAATAGCAAAAGAGGGATTTTCGGCAAACTACAGCGTGTCGCAGAGCAGTGTATC AGAAGATTTCCAGTGCATGGAACCACTAGGTATGGAGTCAGGAGAAATTCACTCTGATCAAATCACTGTCTCCTCCCAG TACAGTGCTATCTGGTCTTCAGAAAGATCCCGGCTAAATTATCCTGAAAACGGATGGACCCCAGGGGAAGATTCTGTCA GAGAATGGATACAGGTAGACCTGGGCCTTCTTCGCTTCGTTTCGGGAATTGGGACCCAAGGAGCCATCTCAAAAGAGAC AAAGAAAGAATATTACCTGAAAACATACCGTGTAGATGTCAGCTCCAATGGGGAAGACTGGATTACACTGAAGGAAGGA AACAAGCCTGTTGTGTTTCAAGGGAATAGCAACCCCACTGATGTTGTTTACAGACCTTTTCCCAAACCAGTTTTAACAC GTTTTGTACGAATTAAACCTGTGTCTTGGGAAAATGGTGTATCGCTGAGATTTGAAGTGTATGGCTGCAAGATAACAGA TTATCCTTGCTCTGGGATGCTGGGCATGGTGTCTGGGCTCATTCCTGACTCTCAGATTACTGCATCTACTCAAGTTGAT AGAAACTGGATCCCGGAAAATGCTCGCCTTATAACAAGCCGTTCAGGCTGGGCGCTGCCACCAACTACTCATCCATATA CAAATGAATGGCTTCAGATAGACCTTGGTGAAGAAAAAATAGTGAGGGGCATTATTGTCCAAGGAGGGAAGCACCGAGA AAACAAAGTATTCATGAAAAAATTCAAAATTGGCTACAGCAACAATGGATCAGATTGGAAAATGATCATGGATTCCAGC AAGAAAAAGATAAAGACTTTTGAAGGCAACACCAACTACGACACACCTGAACTGCGGACTTTTGAACCCGTATCAACGA GAATCATCCGCGTCTACCCTGAGAGAGCCACACACGCAGGACTGGGACTTCGAATGGAGCTGCTGGGATGTGAACTTGA AGCTCCCACGGCTGTCCCTACTGTTTCCGAAGGCAAGCCCGTAGATGAGTGTGATGATGACCAGGCGAACTGTCACAGT GGCACAGGTGGAACTACCGTGCTGAACACAGAAAAGCCGACGGTAATAGACAATACAGTACAACCAGAACTGCCACCGT ACAACTTAAACTGTGGCTTTGGCTGGGGATCCCACAAGACTTTGTGCCAATGGGAACATGACAACCAGGTGGATCTGAA GTGGGCAATTCTGACCAGCAAAACTGGGCCAATTCAAGACCACACAGGAGATGGCAACTTCATCTACTCTCAAGCTGAC GAAAGCCAGAAAGGCAAAGTTGCCCGGCTGTTGAGCCCCATCATTTACTCGCAGAACTCTGCACACTGTATGACTTTCT GGTACCACATGTCTGGCCCGCATGTTGGCACCCTGAAGATCAAGCTGCGGTACCAGAAGCCAGATGAATATGACCAGGT GCTGCTGAGCCTGAACGGGCACCAGGCAAACTGCTGGCAGGAGGGCCGCGTTCTTCTGCACAAGTCTGTGAAACTTTAC CAGGTGGTTATAGAGGGAGAAATTGGAAAGGGAAATGGAGGAATTGCTGTGGATGATATTAATATTGACAATCACATAT CTCAAGAGGATTGCCAAAAATCAACTGATGTGGAGAGTGAAATAGTTGAAGAAGATCCAGAAAGTAATCAAACAGGGTT TACTCCTTCATACCGTACAGATGAGGACTATGATGACATCTCCAGGAAACCAGGCAATGTCCTGAAGACGCTAGACCCA ATCCTTATTACCATCATAGCCATGAGTGCACTTGGGGTGCTTTTAGGAGCCATTTGTGGAGTTGTCCTGTACTGTGCCT GCTGGCACAATGGGATGTCAGAGAGGAACTTGTCTGCACTGGAGAATTACAATTTTGAGCTGGTCGATGGTGTAAAACT GAAGAAAGATAAACTAAACACACAGAATTCTTACTCGGAAGCATGAAGGTATAAAGCAACTTGAGAAGTTTCAGAGAAT CGGGATGGAAGGACATAGCTCGGTCGTGCTGGGGAACTGTTGATCATCTTTTACTGTACAGGCTGAAAAGTGCATTGAT GACACTGAGCCAAGCTTTTCTCAGGAGCTTCAACGAGTGTGTAACCGATAAACATGGACAACGATCTGTGTTAACAATC TGAATCATGTACAGTCTGCTTTTTCTGTTGGTTTTATTTGAAATAATCAAATGCTGGTGTTGAGACCAAGTATGATTGA CTTCTAGTTCATTTTGTCTTTCTTTCTCTCCCTCTCTTTTGTTTTCCGTTAATGGGTAATTTTCTTTTTACTGTGCAAA ATCCAAGATGCTGTCACAAAATGTATTCAGTGGGGTCCTTTGGATGGACATGCTGTCTGTAGCTCAGTGCCCAGAAATT ATTGGAGTAACAGCAATTTAGTGGACTCCTGCACCTGTATTTGTGTATAATTGCTCGTGTTGTGCATAGGCAAAGAAGG GTTAGGATGTTTTTGAAAGTACTGCTGCATCAGTACCAATATAGTGTGTCAGCTCTGTTTACAAAGCAATACAGTCAAA TTTTATTGATGTTTTTCAGTGTTGTACTAAATTTTGTGCTTGTGACTCCATAAAAGCAGTATGTGCCATCATCAGACAC AACTGGTAACAGATTATACTGCCTAAAATCTAAACAAAAAAGTCCTTGGCACTGGCTAGTGTATGTCCTCTCAAGTGCC TTTTTGTTTGTACTGCTTCTCATTGTGTTAACATTGACTACAGCTCTGCTTCTCTCCAATTATGCCCTTGTCTTTAATC ATATTCTGATGGCTCACTGAATAAAATAAAAGTATATTTTAGTGTAAGAGAGTAGCCTCGGCAAGGCAAGGGCTAATCA GATTTACCACCTGGTTCAATTGTTCTGCTTTCTGTATTTCAACTTCATGTCTCTTGACCCTTTTGTATAAAGCTGCAAT ATCCTCTTTTAATGTTCTTTCATATAGAATGTATTTTCAAATGTAAAATCTCTCTACCTTTC
Citation	Herzog Y, Guttmann-Raviv N, Neufeld G. Segregation of arterial and venous markers in subpopulations of blood islands before vessel formation. Dev Dyn. 2005 Apr;232(4):1047-55.
Copyright	Copyright © 2005 Wiley-Liss, Inc.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204782.1 ).