Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

DACH2
dachshund family transcription factor 2

Gene

Official Symbol	DACH2
Official Full Name	dachshund family transcription factor 2
CGNC ID	5198
also known as	dachshund homolog 2
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_204795
Polypeptide	NP_990126

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	117154	ENSG00000126733		MIM:300608
Mouse	93837	ENSMUSG00000025592	All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1)	MGI:1890446
Xenopus	100101662, 496011			876612
Zebrafish	192121	ENSDARG00000010132	ZDB-GENE-020402-3	ZFIN:ZDB-GENE-020402-3

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395576
Ensembl Gene	ENSGALG00000006886
KEGG	gga:395576

Entry 1

GEISHA Id	DACH2.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-TGAAGGTGGCCTCGTTTCTC-3’
Reverse cDNA Template Primer	5’-AATTAACCCTCACTAAAGGCACTTCCAAGGCTCGACTGT-3’	cDNA Template Length	621
Complete cDNA Template Probe	show TGAAGGTGGCCTCGTTTCTCGTGGAGGGGCAGGAGCTGATCTGCCTGCCGCAGGTCTTCGACCTCTTCCTCAAGCACCT TGTGGGAGGGCTGCACACGGTGTACACCAAGCTGAAGCGGCTGGATATATCGCCCGTGGTCTGCACGGTGGAGCAGGTC CGCATCCTGCGCGGGCTGGGGGCCATCCAGCCCGGCGTCAACCGCTGCAAGCTCATCACCAGGAAGGACTTCGAAACTT TGTACAACGACTGCACCAACGCCAGCTCACGGCCAGGAAGACCCCCAAAGCGTTCACTTGGAGTTGCGATACAGGAAAA CGCACGCCTTCTGCCCCATGGAGTTCCAGGCCTCTTATCACCAGGCCTTATCTCTCCGACAGGTTTGACAGCAGCAGCC ATGGCAGAGGCTATGAAGTTACAGAAGATGAAACTTATGGCAATGAATAGCCTCCATGGAAGTGGAAGTCAAAATGGAA CAGAATCAGAAAATGAAGAACTTAATTCTAACGCAGGTGGGAGTGAATCCTCCTGGGATAAAGACAAGCTTCAGTCTCC CATTACAACAGGATCACAGCACAGCATTGGTCATCCCACCCTGTCAGGACAGTCGAGCCTTGGAAGTG

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

Unlabeled

7-12

stage 7

stage 8

stage 9

Extraembryonic Mesoderm
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Somites

13-18

stage 13

stage 16

stage 18

Dermomyotome
Ear/Otic Placode
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Liver
Lung
Midbrain
Nephric Ducts
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Splanchnic Mesoderm
Ventricles

19-24

stage 20

stage 23

Ear/Otic Placode
Esophagus
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Lung
Mesonephros
Myelencephalon
Neural Plate/Tube
Pharyngeal Arches and Clefts
Rhombomeres
Spinal Ganglia and Nerves

25-26

stage 26

Ear/Otic Placode
Eye
Forebrain
Foregut
Hindbrain
Leg Mesenchyme
Lung
Mesonephros
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	DACH2.Szele.2002	Data Source	Publication
Complete cDNA Template Probe	show ATGGCTGTCTCCGCGCCGCCCGTCATCGCCGCAACTTCCAGCGGTGGCGGCGCGGGGGGCTCGGCCGGCTTGTTCCGGG CGGACCCGCTGTACTCCAGCCCCGCGGAGTCCCCGCGCCTCACCAACAGCCTCGTCAACAGTTTCCTCTCCGCGGGCGG CGGCGGGACCGGCGCGGGCGGCGGCGGCGGCGGCGGCAACGAGTGTAAGATGGTCGACCTGCACGGGGTGAAGGTGGCC TCGTTTCTCGTGGAGGGGCAGGAGCTGATCTGCCTGCCGCAGGTCTTCGACCTCTTCCTCAAGCACCTTGTGGGAGGGC TGCACACGGTGTACACCAAGCTGAAGCGGCTGGATATATCGCCCGTGGTCTGCACGGTGGAGCAGGTCCGCATCCTGCG CGGGCTGGGGGCCATCCAGCCCGGCGTCAACCGCTGCAAGCTCATCACCAGGAAGGACTTCGAAACTTTGTACAACGAC TGCACCAACGCCAGCTCACGGCCAGGAAGACCCCCAAAGCGTTCACTTGGAGTTGCGATACAGGAAAACGCACGCCTTC TGCCCCATGGAGTTCCAGGCCTCTTATCACCAGGCCTTATCTCTCCGACAGGTTTGACAGCAGCAGCCATGGCAGAGGC TATGAAGTTACAGAAGATGAAACTTATGGCAATGAATAGCCTCCATGGAAGTGGAAGTCAAAATGGAACAGAATCAGAA AATGAAGAACTTAATTCTAACGCAGGTGGGAGTGAATCCTCCTGGGATAAAGACAAGCTTCAGTCTCCCATTACAACAG GATCACAGCACAGCATTGGTCATCCCACCCTGTCAGGACAGTCGAGCCTTGGAAGTGCACACCCACTCAGTCCTCTTCA GCAGAACCACCTGCTTACCAACAGGATAGACCTGCCGTTTATGATGATGCCCCACCCTCTGCTACCCGTCAGCCTACCT CCTGCTTCGGTTGCAATGGCAATGAATCAGATGAACCACCTCAATACAATAGCTAACATGGCTGCAGCAGCCCAAATGC ACAGTCCTCTTTCCAGGGCAGGGGCCTCTGTTATAAAGGAAAGGATTCAAGACAGCCCTTCTCCAGCTCCATCCCTAGA AGACAGTCAGCGGCCTGGGAGCCACGCTTCCTCTCATCAGAGCAGCAGCGTGTCCAGCTCACCTTCCCAGCTAGACAAC ACACCAGACAGAATTGCTATGTTGACCAACAGCAGGGAAGGAGAGCTCATTGATCAAGAAACCGGGACAAGCCTAAAAA AAATGCAAAAGGAGAAAGAAGAGGTCCAGATTGCCATTCCAATAATGAAACCAACCTTAGATAAAGTCCAACTGGCTGG ACAGGCCTTGCCTCCTGGATTTCCAGCGCCATTTCTTTTTGCTGATGGTCTTTCATCAGTTGAAACACTATTAACCAAC ATTCAGGGCCTGCTGAAAGTGGCTGTGGACAATGCCAGAGTCCAGGAAAAGCAGATACAGCAGGAAAAGAAAGAGTTAA AGATGGAGCTTTGTAGAGAGAGAGAGCTCAGAGAGAGCTTGGAAAGGCAACTTACAGCTGAGCTGCAAAGCAGAGCAAC AATTCAGAAACGCTTGAAGAAAGAAAAAAAGGCGAAGAGAAAATTGCAGGAGGCTTTGGAATTTGAATCCAAGAGAAGA GAACAAGTGGAACAGGCGCTTAAACAGGCCACATCAGGTGACGGTCTCAGGATGTTAAATGATGCTGGAATCCCAGATA TGGAAATAGAACACAACGGAACCCAACATGACAGTGCAGCAATGCAAGAAAACAGAACATACATCAAACCTACCATCAT GTACTGA
Citation	Szele FG, Chin HK, Rowlson MA, Cepko CL. Sox-9 and cDachsund-2 expression in the developing chick telencephalon. Mech Dev. 2002 Mar;112(1-2):179-82.
Copyright	Copyright © 2002 Elsevier Science Ireland Ltd. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204795.1)