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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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DACH2
dachshund family transcription factor 2

Gene

Official Symbol	DACH2
Official Full Name	dachshund family transcription factor 2
CGNC ID	5198
also known as	dachshund homolog 2
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204795
Polypeptide	NP_990126
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.3178

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	117154	ENSG00000126733		MIM:300608
Mouse	93837	ENSMUSG00000025592	All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1)	MGI:1890446
Xenopus	100101662, 496011			876612
Zebrafish	192121	ENSDARG00000010132	ZDB-GENE-020402-3	ZFIN:ZDB-GENE-020402-3

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395576
Ensembl Gene	ENSGALG00000006886
KEGG	gga:395576

Entry 1

GEISHA Id	DACH2.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-TGAAGGTGGCCTCGTTTCTC-3’
Reverse cDNA Template Primer	5’-AATTAACCCTCACTAAAGGCACTTCCAAGGCTCGACTGT-3’	cDNA Template Length	621
Complete cDNA Template Probe	show TGAAGGTGGCCTCGTTTCTCGTGGAGGGGCAGGAGCTGATCTGCCTGCCGCAGGTCTTCGACCTCTTCCTCAAGCACCT TGTGGGAGGGCTGCACACGGTGTACACCAAGCTGAAGCGGCTGGATATATCGCCCGTGGTCTGCACGGTGGAGCAGGTC CGCATCCTGCGCGGGCTGGGGGCCATCCAGCCCGGCGTCAACCGCTGCAAGCTCATCACCAGGAAGGACTTCGAAACTT TGTACAACGACTGCACCAACGCCAGCTCACGGCCAGGAAGACCCCCAAAGCGTTCACTTGGAGTTGCGATACAGGAAAA CGCACGCCTTCTGCCCCATGGAGTTCCAGGCCTCTTATCACCAGGCCTTATCTCTCCGACAGGTTTGACAGCAGCAGCC ATGGCAGAGGCTATGAAGTTACAGAAGATGAAACTTATGGCAATGAATAGCCTCCATGGAAGTGGAAGTCAAAATGGAA CAGAATCAGAAAATGAAGAACTTAATTCTAACGCAGGTGGGAGTGAATCCTCCTGGGATAAAGACAAGCTTCAGTCTCC CATTACAACAGGATCACAGCACAGCATTGGTCATCCCACCCTGTCAGGACAGTCGAGCCTTGGAAGTG

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

Unlabeled

7-12

stage 7

stage 8

stage 9

Extraembryonic Mesoderm
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Somites

13-18

stage 13

stage 16

stage 18

Dermomyotome
Ear/Otic Placode
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Liver
Lung
Midbrain
Nephric Ducts
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Splanchnic Mesoderm
Ventricles

19-24

stage 20

stage 23

Ear/Otic Placode
Esophagus
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Lung
Mesonephros
Myelencephalon
Neural Plate/Tube
Pharyngeal Arches and Clefts
Rhombomeres
Spinal Ganglia and Nerves

25-26

stage 26

Ear/Otic Placode
Eye
Forebrain
Foregut
Hindbrain
Leg Mesenchyme
Lung
Mesonephros
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	DACH2.Szele.2002	Data Source	Publication
Complete cDNA Template Probe	show ATGGCTGTCTCCGCGCCGCCCGTCATCGCCGCAACTTCCAGCGGTGGCGGCGCGGGGGGCTCGGCCGGCTTGTTCCGGG CGGACCCGCTGTACTCCAGCCCCGCGGAGTCCCCGCGCCTCACCAACAGCCTCGTCAACAGTTTCCTCTCCGCGGGCGG CGGCGGGACCGGCGCGGGCGGCGGCGGCGGCGGCGGCAACGAGTGTAAGATGGTCGACCTGCACGGGGTGAAGGTGGCC TCGTTTCTCGTGGAGGGGCAGGAGCTGATCTGCCTGCCGCAGGTCTTCGACCTCTTCCTCAAGCACCTTGTGGGAGGGC TGCACACGGTGTACACCAAGCTGAAGCGGCTGGATATATCGCCCGTGGTCTGCACGGTGGAGCAGGTCCGCATCCTGCG CGGGCTGGGGGCCATCCAGCCCGGCGTCAACCGCTGCAAGCTCATCACCAGGAAGGACTTCGAAACTTTGTACAACGAC TGCACCAACGCCAGCTCACGGCCAGGAAGACCCCCAAAGCGTTCACTTGGAGTTGCGATACAGGAAAACGCACGCCTTC TGCCCCATGGAGTTCCAGGCCTCTTATCACCAGGCCTTATCTCTCCGACAGGTTTGACAGCAGCAGCCATGGCAGAGGC TATGAAGTTACAGAAGATGAAACTTATGGCAATGAATAGCCTCCATGGAAGTGGAAGTCAAAATGGAACAGAATCAGAA AATGAAGAACTTAATTCTAACGCAGGTGGGAGTGAATCCTCCTGGGATAAAGACAAGCTTCAGTCTCCCATTACAACAG GATCACAGCACAGCATTGGTCATCCCACCCTGTCAGGACAGTCGAGCCTTGGAAGTGCACACCCACTCAGTCCTCTTCA GCAGAACCACCTGCTTACCAACAGGATAGACCTGCCGTTTATGATGATGCCCCACCCTCTGCTACCCGTCAGCCTACCT CCTGCTTCGGTTGCAATGGCAATGAATCAGATGAACCACCTCAATACAATAGCTAACATGGCTGCAGCAGCCCAAATGC ACAGTCCTCTTTCCAGGGCAGGGGCCTCTGTTATAAAGGAAAGGATTCAAGACAGCCCTTCTCCAGCTCCATCCCTAGA AGACAGTCAGCGGCCTGGGAGCCACGCTTCCTCTCATCAGAGCAGCAGCGTGTCCAGCTCACCTTCCCAGCTAGACAAC ACACCAGACAGAATTGCTATGTTGACCAACAGCAGGGAAGGAGAGCTCATTGATCAAGAAACCGGGACAAGCCTAAAAA AAATGCAAAAGGAGAAAGAAGAGGTCCAGATTGCCATTCCAATAATGAAACCAACCTTAGATAAAGTCCAACTGGCTGG ACAGGCCTTGCCTCCTGGATTTCCAGCGCCATTTCTTTTTGCTGATGGTCTTTCATCAGTTGAAACACTATTAACCAAC ATTCAGGGCCTGCTGAAAGTGGCTGTGGACAATGCCAGAGTCCAGGAAAAGCAGATACAGCAGGAAAAGAAAGAGTTAA AGATGGAGCTTTGTAGAGAGAGAGAGCTCAGAGAGAGCTTGGAAAGGCAACTTACAGCTGAGCTGCAAAGCAGAGCAAC AATTCAGAAACGCTTGAAGAAAGAAAAAAAGGCGAAGAGAAAATTGCAGGAGGCTTTGGAATTTGAATCCAAGAGAAGA GAACAAGTGGAACAGGCGCTTAAACAGGCCACATCAGGTGACGGTCTCAGGATGTTAAATGATGCTGGAATCCCAGATA TGGAAATAGAACACAACGGAACCCAACATGACAGTGCAGCAATGCAAGAAAACAGAACATACATCAAACCTACCATCAT GTACTGA
Citation	Szele FG, Chin HK, Rowlson MA, Cepko CL. Sox-9 and cDachsund-2 expression in the developing chick telencephalon. Mech Dev. 2002 Mar;112(1-2):179-82.
Copyright	Copyright © 2002 Elsevier Science Ireland Ltd. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204795.1)