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WNT9A Wnt family member 9A Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol WNT9A Official Full Name Wnt family member 9A CGNC ID 4021 also known as WNT-14, WNT14, protein Wnt-9a|wingless-type MMTV integration site family, member 9A, Wnt-9a protein precursor, Wnt-14 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id WNT9A.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer TTATAAAAGCTTGCGGCCGCAGAATATAAGCCCTGACCATCCTCCC Reverse cDNA Template Primer GCTCTAGAAATTAACCCTCACTAAAGGAGAACTCCTTGACGAACTTGTTGC cDNA Template Length 441 Forward cDNA Template Probe show GGGCTGAGNNAGAATTNNNNNTTTGAGTATAATGGATGAGCCGCTGCTAAAGCCCACTACAGAGTCTGTGACCTCCTGG ACCTGGACAAGAATCACCGCAGGATGTGCCGGCGGGACCCCGGTGTGGCCGATGACCTGATGGAGGCCATCCCATGAGT GCACTGGAGTGCCAGTACCGGTTTCGCTTTGAGCGTTGGAATTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTAA TGAGAGGTTTCAAGGAGACGGGCTTCCTCTACGCCATTTCTTCTGCAGGGATGACACATGCCATGGCCAAAGCGTGCAG TGGGTGCCGGATGGAGCGCTGCACCTGCTACGAGGCCCCCGACCTGGAGAACCGCAAGGCCTGGTAGTGGGGTGGCTGT GCTGACAACCTGAAATACAGCAACAAGTGCGTCAAGGAGTTCTCCTTTCGTGAGGGTTAATTTCTAGAGCAAAA
Entry 2 GEISHA Id Wnt14 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show GTCGACTTGGTCAGGATGAGCAGCGCCGGCGCCGCTGCAAGATGCTGGATGGACACGTCCTGCTGGGATGGCTCTCCTC CGCGCGCTTCTAGGGCTGCTCGCCTGCACCCCGCGGCCCTCCGCCGCCTACTTCGGGCTGACGGGCAACGAAGCCCTGA CCATCCTCCCTCTGACCTCAGAAATGGAGGAAGCCGCTGTCAAAGCCCACTACAAAGTCTGTGACCGCCTGAAGCTGGA GAAGAAGCAGCGCAGGATGTGCCGGCGGGACCCCGGCGGGGCCGAGACCCTGATGGAGGCCATCAGCATGAGTGCACTG GAGTGCCAGTACCAGTTTCGCTTTGAGCGTTGGAATTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTAAAGAGAG GTTTCAAGGAGACGGCCTTCCTCTACGCCATTTCTTCTGCAGGGCTGACACATGCGATGGCCAAAGCGTGCAGTGCAGG CCGGATGGAGCGCTGCACCTGCGACGAGGCCCCCGACCTGGAGAACCGCGAGGCCTGGCAGTGGGGTGGCTGTGGTGAC AACCTGAAATACAGCAACAAGTTCGTCAAGGAGTTCTTGGGAAGGAAGCCCAACAAGGACCTGCGAGCCAGGGTGGATT TCCACAATAACCTTGTGGGCATGAAGGTCATCAAAGCTGGTGTGGAAACAACCTGTAAGTGCCACGGTGTGTCTGGGTC CTGCACCGTCCGAACGTGCTGGAGGCAGCTTTCTCCATTCCACGAAATAGGGAAGCAGCTGAAGCAGAAGTACGAGACG TCGCTCAAAGTGGGCAGCACTACCAACGAGGCCACGGGGGAAGGAGACATTTCCCCGCCCAAGAAATCCATCCCTGGTC ACAGTGATCAAATCCCAAGGACTACGGATCTTGTCTACATTGACGATTCCCCAAGCTTTTGTCTGATGAGCAGATACTC ACCCGGGACTTCGGGAAGGAAATGTTATAAAGACAAGAACTGTGACAGCATCTGCTGTGGGCGAGGGCACAATACGCAG AGCCGGGTGGTCACTCGGCCATGCCAGTGCCAGGTCCGTTGGTGCTGCTACGTGGAATGCAAGCAGTGCACCCAGAGAG AGGAGGTTTACACCTGTAAAGACTGACGCATGTTCTGCCTGATGCGAACCCTCAGCGGCGGGCGATCACGATCTACTGA GAACTACATATGGAGACAAACAGGGTTTATTACCTTCT
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 4 stage 4
stage 4
Area Pellucida
Entry 3 GEISHA Id Wnt14.Chapman.2004 Data Source Publication Complete cDNA Template Probe show GTCGACTTGGTCAGGATGAGCAGCGCCGGCGCCGCTGCAAGATGCTGGATGGACACGTCCTGCTGGGATGGCTCTCCTC CGCGCGCTTCTAGGGCTGCTCGCCTGCACCCCGCGGCCCTCCGCCGCCTACTTCGGGCTGACGGGCAACGAAGCCCTGA CCATCCTCCCTCTGACCTCAGAAATGGAGGAAGCCGCTGTCAAAGCCCACTACAAAGTCTGTGACCGCCTGAAGCTGGA GAAGAAGCAGCGCAGGATGTGCCGGCGGGACCCCGGCGGGGCCGAGACCCTGATGGAGGCCATCAGCATGAGTGCACTG GAGTGCCAGTACCAGTTTCGCTTTGAGCGTTGGAATTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTAAAGAGAG GTTTCAAGGAGACGGCCTTCCTCTACGCCATTTCTTCTGCAGGGCTGACACATGCGATGGCCAAAGCGTGCAGTGCAGG CCGGATGGAGCGCTGCACCTGCGACGAGGCCCCCGACCTGGAGAACCGCGAGGCCTGGCAGTGGGGTGGCTGTGGTGAC AACCTGAAATACAGCAACAAGTTCGTCAAGGAGTTCTTGGGAAGGAAGCCCAACAAGGACCTGCGAGCCAGGGTGGATT TCCACAATAACCTTGTGGGCATGAAGGTCATCAAAGCTGGTGTGGAAACAACCTGTAAGTGCCACGGTGTGTCTGGGTC CTGCACCGTCCGAACGTGCTGGAGGCAGCTTTCTCCATTCCACGAAATAGGGAAGCAGCTGAAGCAGAAGTACGAGACG TCGCTCAAAGTGGGCAGCACTACCAACGAGGCCACGGGGGAAGGAGACATTTCCCCGCCCAAGAAATCCATCCCTGGTC ACAGTGATCAAATCCCAAGGACTACGGATCTTGTCTACATTGACGATTCCCCAAGCTTTTGTCTGATGAGCAGATACTC ACCCGGGACTTCGGGAAGGAAATGTTATAAAGACAAGAACTGTGACAGCATCTGCTGTGGGCGAGGGCACAATACGCAG AGCCGGGTGGTCACTCGGCCATGCCAGTGCCAGGTCCGTTGGTGCTGCTACGTGGAATGCAAGCAGTGCACCCAGAGAG AGGAGGTTTACACCTGTAAAGACTGACGCATGTTCTGCCTGATGCGAACCCTCAGCGGCGGGCGATCACGATCTACTGA GAACTACATATGGAGACAAACAGGGTTTATTACCTTCT
Citation Chapman, S, Brown, R, Lees, L, Schoenwolf, G, Lumsden, A. Expression Analysis of Chick Wnt and Frizzled Genes and Selected Inhibitors in Early Chick Patterning. Dev Dyn. 2004 Mar;229(3):668-76. Copyright Wiley-Liss, Inc. 2004
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 4-5 stage 4
stage 4
stage 5
Germinal Crescent
Entry 4 GEISHA Id Wnt9a.Fokina.2006 Data Source Publication Complete cDNA Template Probe show GCAAGATGCTGGATGGACACGTCCTGCTGGGATGGCTCTCCTCCTGCGCGCTTCTAGGGCTGCTCGCCTGCACCCCGCG GCCCTCCGCCGCCTACTTCGGGTTGACGGGCAACGAACCCCTGACCATCCTCCCTCTGACCTCAGAAATGGAGGAAGCC GCTGTCAAAGCCCACTACAAAGTCTGTGACCGCCTGAAGCTGGAGAAGAAGCAGCGCAGGATGTGCCGGCGGGACCCCG GCGTGGCCGAGACCCTGATGGAGGCCATCAGCATGAGTGCACTGGAGTGCCAGTACCAGTTTCGCTTTGAGCGTTGGAA TTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTAAAGAGAGGTTTCAAGGAGACGGCCTTCCTCTACGCCATTTCT TCTGCAGGGCTGACACATGCGATGGCCAAAGCGTGCAGTGCAGGCCGGATGGAGCGCTGCACCTGCGACGAGGCCCCCG ACCTGGAGAACCGCGAGGCCTGGCAGTGGGGTGGCTGTGGTGACAACCTGAAATACAGCAACAAGTTCGTCAAGGAGTT CTTGGGGAGGAAGCCCAACAAGGACCTGCGAGCCAGGGTGGATTTCCACAATAACCTTGTGGGCATGAAGGTCATCAAA GCTGGTGTGGAAACAACCTGTAAGTGCCACGGTGTGTCTGGGTCCTGCACCGTCCGAACGTGCTGGAGGCAGCTTTCTC CATTCCACGAAATAGGGAAGCAGCTGAAGCAGAAGTACGAGACGTCGCTCAAAGTGGGCAGCACTACCAACGAGGCCAC GGGGGAAGGAGACATTTCCCCGCCCAAGAAATCCATCCCTGGTCACAGTGATCAAATCCCAAGGACTACGGATCTTGTC TACATTGACGATTCCCCAAGCTTTTGTCTGATGAGCAGATACTCACCCGGGACTTCGGGAAGGAAATGTTACAAAGACA AGAACTGTGACAGCATCTGCTGTGGGCGAGGGCACAATACGCAGAGCCGGGTGGTCACTCGGCCATGCCAGTGCCAGGT CCGTTGGTGCTGCTACGTGGAATGCAAGCAGTGCACCCAGAGAGAGGAGGTTTACACCTGTAAAGACTGACGCATGTTC TGCCTGATGCGAACC
Citation Fokina VM, Frolova EI. Expression patterns of Wnt genes during development of an anterior part of the chicken eye. Dev Dyn. 2006 Feb;235(2):496-505. Copyright Copyright © 2008 Wiley-Liss, Inc.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 24
stage 24
Eye Liver 25-30 stage 28
Eye 31 stage 31
Eye
Entry 5 GEISHA Id Wnt9a.Person.2005 Data Source Publication Complete cDNA Template Probe show AGCTGGAGAAGAAGCAGCGCAGGATGTGCCGGCGGGACCCCGGCGGGGCCGAGACCCTGATGGAGGCCATCAGCATGAG TGCACTGGAGTGCCAGTACCAGTTTCGCTTTGAGCGTTGGAATTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTA AAGAGAGGTTTCAAGGAGACGGCCTTCCTCTACGCCATTTCTTCTGCAGGGCTGACACATGCGATGGCCAAAGCGTGCA GTGCAGGCCGGATGGAGCGCTGCACCTGCGACGAGGCCCCCGACCTGGAGAACCGCGAGGCCTGGCAGTGGGGTGGCTG TGGTGACAACCTGAAATACAGCAACAAGTTCGTCAAGGAGTTCTTGGGAAGGAAGCCCAACAAGGACCTGCGAGCCAGG GTGGATTTCCACAATAACCTTGTGGGCATGAAGGTCATCAAAGCTGGTGTGGAAACAACCTGTAAGTGCCACGGTGTGT CTGGGTCCTGCACCGTCCGAACGTGCTGGAGGCAGCTTTCTCCATTCCACGAAATAGGGAAGCAGCTGAAGCAGAAGTA CGAGACGTCGCTCAAAG
Citation Person AD, Garriock RJ, Krieg PA, Runyan RB, Klewer SE (2005). Frzb modulates Wnt-9a-mediated beta-catenin signaling during avian atrioventricular cardiac cushion development. Dev Biol. 2005 Feb 1;278(1):35-48. Copyright Copyright © 2004 Published by Elsevier Inc. Comments According to the authors, "Specific cDNAs for chicken Wnt-9a (bp 231800;
GenBank no. AF031168) and chicken Frzb (bp 423918; GenBank no. AF218057) were isolated by RT-PCR from HH stage 16 AV canals and cloned into pSTBlue-1
(Novagen). Whole-mount in situ hybridization protocols and Digoxigenin (DIG)-labeled riboprobe synthesis for
chicken Wnt-9a and Frzb probes were as described (Nieto et al., 1996)." The sequence below was obtained from NCBI (AF031168) using the information provided.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 16
Endocardium Heart 19-24 stage 20
stage 24
Endocardium Heart
Entry 6 GEISHA Id Wnt9A.Quinlan.2009 Data Source Publication Complete cDNA Template Probe show GTCGACTTGGTCAGGATGAGCAGCGCCGGCGCCGCTGCAAGATGCTGGATGGACACGTCCTGCTGGGATGGCTCTCCTC CGCGCGCTTCTAGGGCTGCTCGCCTGCACCCCGCGGCCCTCCGCCGCCTACTTCGGGCTGACGGGCAACGAAGCCCTGA CCATCCTCCCTCTGACCTCAGAAATGGAGGAAGCCGCTGTCAAAGCCCACTACAAAGTCTGTGACCGCCTGAAGCTGGA GAAGAAGCAGCGCAGGATGTGCCGGCGGGACCCCGGCGGGGCCGAGACCCTGATGGAGGCCATCAGCATGAGTGCACTG GAGTGCCAGTACCAGTTTCGCTTTGAGCGTTGGAATTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTAAAGAGAG GTTTCAAGGAGACGGCCTTCCTCTACGCCATTTCTTCTGCAGGGCTGACACATGCGATGGCCAAAGCGTGCAGTGCAGG CCGGATGGAGCGCTGCACCTGCGACGAGGCCCCCGACCTGGAGAACCGCGAGGCCTGGCAGTGGGGTGGCTGTGGTGAC AACCTGAAATACAGCAACAAGTTCGTCAAGGAGTTCTTGGGAAGGAAGCCCAACAAGGACCTGCGAGCCAGGGTGGATT TCCACAATAACCTTGTGGGCATGAAGGTCATCAAAGCTGGTGTGGAAACAACCTGTAAGTGCCACGGTGTGTCTGGGTC CTGCACCGTCCGAACGTGCTGGAGGCAGCTTTCTCCATTCCACGAAATAGGGAAGCAGCTGAAGCAGAAGTACGAGACG TCGCTCAAAGTGGGCAGCACTACCAACGAGGCCACGGGGGAAGGAGACATTTCCCCGCCCAAGAAATCCATCCCTGGTC ACAGTGATCAAATCCCAAGGACTACGGATCTTGTCTACATTGACGATTCCCCAAGCTTTTGTCTGATGAGCAGATACTC ACCCGGGACTTCGGGAAGGAAATGTTATAAAGACAAGAACTGTGACAGCATCTGCTGTGGGCGAGGGCACAATACGCAG AGCCGGGTGGTCACTCGGCCATGCCAGTGCCAGGTCCGTTGGTGCTGCTACGTGGAATGCAAGCAGTGCACCCAGAGAG AGGAGGTTTACACCTGTAAAGACTGACGCATGTTCTGCCTGATGCGAACCCTCAGCGGCGGGCGATCACGATCTACTGA GAACTACATATGGAGACAAACAGGGTTTATTACCTTCT
Citation Quinlan R, Graf M, Mason I, Lumsden A, Kiecker C. Complex and dynamic patterns of Wnt pathway gene expression in the developing chick forebrain. Neural Dev. 2009 Sep 4;4:35. Copyright Copyright © 2009 Quinlan et al; licensee BioMed Central Ltd. [This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.] Comments Authors indicate probe came from another reference. There it is listed as NCBI acc# AAC41248, which is the protein version of AF031168.1.
Entry 7 GEISHA Id WNT9A.Sienknecht.2009 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show GTCGACTTGGTCAGGATGAGCAGCGCCGGCGCCGCTGCAAGATGCTGGATGGACACGTCCTGCTGGGATGGCTCTCCTC CGCGCGCTTCTAGGGCTGCTCGCCTGCACCCCGCGGCCCTCCGCCGCCTACTTCGGGCTGACGGGCAACGAAGCCCTGA CCATCCTCCCTCTGACCTCAGAAATGGAGGAAGCCGCTGTCAAAGCCCACTACAAAGTCTGTGACCGCCTGAAGCTGGA GAAGAAGCAGCGCAGGATGTGCCGGCGGGACCCCGGCGGGGCCGAGACCCTGATGGAGGCCATCAGCATGAGTGCACTG GAGTGCCAGTACCAGTTTCGCTTTGAGCGTTGGAATTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTAAAGAGAG GTTTCAAGGAGACGGCCTTCCTCTACGCCATTTCTTCTGCAGGGCTGACACATGCGATGGCCAAAGCGTGCAGTGCAGG CCGGATGGAGCGCTGCACCTGCGACGAGGCCCCCGACCTGGAGAACCGCGAGGCCTGGCAGTGGGGTGGCTGTGGTGAC AACCTGAAATACAGCAACAAGTTCGTCAAGGAGTTCTTGGGAAGGAAGCCCAACAAGGACCTGCGAGCCAGGGTGGATT TCCACAATAACCTTGTGGGCATGAAGGTCATCAAAGCTGGTGTGGAAACAACCTGTAAGTGCCACGGTGTGTCTGGGTC CTGCACCGTCCGAACGTGCTGGAGGCAGCTTTCTCCATTCCACGAAATAGGGAAGCAGCTGAAGCAGAAGTACGAGACG TCGCTCAAAGTGGGCAGCACTACCAACGAGGCCACGGGGGAAGGAGACATTTCCCCGCCCAAGAAATCCATCCCTGGTC ACAGTGATCAAATCCCAAGGACTACGGATCTTGTCTACATTGACGATTCCCCAAGCTTTTGTCTGATGAGCAGATACTC ACCCGGGACTTCGGGAAGGAAATGTTATAAAGACAAGAACTGTGACAGCATCTGCTGTGGGCGAGGGCACAATACGCAG AGCCGGGTGGTCACTCGGCCATGCCAGTGCCAGGTCCGTTGGTGCTGCTACGTGGAATGCAAGCAGTGCACCCAGAGAG AGGAGGTTTACACCTGTAAAGACTGACGCATGTTCTGCCTGATGCGAACCCTCAGCGGCGGGCGATCACGATCTACTGA GAACTACATATGGAGACAAACAGGGTTTATTACCTTCT
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204981.1)
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 20
stage 20
Ear/Otic Placode 25-27 stage 25
stage 27
stage 27
Ear/Otic Placode
Entry 8 GEISHA Id Wnt14.Loganathan.2005 Data Source Publication Complete cDNA Template Probe show GGCGGGGGAACGAGATGAGCAGCGCCGGCGCCGCTGCAAGATGCTGGATGGACACGTCCTGCTGGGATGGCTCTCCTCC TGCGCGCTTCTAGGGCTGCTCGCCTGCACCCCGCGGCCCTCCGCCGCCTACTTCGGGTTGACGGGCAACGAACCCCTGA CCATCCTCCCTCTGACCTCAGAAATGGAGGAAGCCGCTGTCAAAGCCCACTACAAAGTCTGTGACCGCCTGAAGCTGGA GAAGAAGCAGCGCAGGATGTGCCGGCGGGACCCCGGCGTGGCCGAGACCCTGATGGAGGCCATCAGCATGAGTGCACTG GAGTGCCAGTACCAGTTTCGCTTTGAGCGTTGGAATTGCACCCTGGAGGGCCGCTACCGGGCCAGCTTGCTAAAGAGAG GTTTCAAGGAGACGGCCTTCCTCTACGCCATTTCTTCTGCAGGGCTGACACATGCGATGGCCAAAGCGTGCAGTGCGGG CCGGATGGAGCGCTGCACCTGCGACGAGGCCCCCGACCTGGAGAACCGCGAGGCCTGGCAGTGGGGTGGCTGTGGTGAC AACCTGAAATACAGCAACAAGTTCGTCAAGGAGTTCTTGGGGAGGAAGCCCAACAAGGACCTGCGAGCCAGGGTGGATT TCCACAATAACCTTGTGGGCATGAAGGTCATCAAAGCTGGTGTGGAAACAACCTGTAAGTGCCACGGTGTGTCTGGGTC CTGCACCGTCCGAACGTGCTGGAGGCAGCTTTCTCCATTCCACGAAATAGGGAAGCAGCTGAAGCAGAAGTACGAGACG TCGCTCAAAGTGGGCAGCACTACCAACGAGGCCACGGGGGAAGGAGACATTTCCCCGCCCAAGAAATCCATCCCTGGTC ACAGTGATCAAATCCCAAGGACTACGGATCTTGTCTACATTGACGATTCCCCAAGCTTTTGTCTGATGAGCAGATACTC ACCCGGGACTTCGGGAAGGAAATGTTACAAAGACAAGAACTGTGACAGCATCTGCTGTGGGCGAGGGCACAATACGCAG AGCCGGGTGGTCACTCGGCCATGCCAGTGCCAGGTCCGTTGGTGCTGCTACGTGGAATGCAAGCAGTGCACCCAGAGAG AGGAGGTTTACACCTGTAAAGACTGACGCATGTTCTGCCTGATGGCAACCCTCAGCGGCGGGCGATCACGATCTATGAG AACTACATATGGAGACAAACAGGGTTTGATTGACCTTCTGGGATCTGAAAGCTATGTTGAGACATAAGCACTTTGTA
Citation Loganathan PG, Nimmagadda S, Huang R, Scaal M, Christ B. Comparative analysis of the expression patterns of Wnts during chick limb development. Histochem Cell Biol. 2005 Feb;123(2):195-201. Copyright Copyright © Springer-Verlag 2005 Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204981 )
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 17
Unlabeled 19-24 stage 20
stage 23
Unlabeled Wing 25-30 stage 26
stage 26
stage 29
Limb Buds Wing 31-44 stage 31
stage 34
stage 44
stage 44
Wing
Mouse Frog Fruit Fly Zebra Finch Zebrafish