GEISHA - A Chicken Embryo Gene Expression Database
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LEF1
lymphoid enhancer binding factor 1

Gene
Official SymbolLEF1
Official Full Namelymphoid enhancer binding factor 1
CGNC ID7997
also known asLEF-1, lymphoid enhancer-binding factor 1|lymphiod enhancer binding factor 1|transcription factor LEF-1, transcription factor LEF-1 , LEF-1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205013
PolypeptideNP_990344
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2694
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human51176ENSG00000138795MIM:153245MIM:153245
Mouse16842ENSMUSG00000027985All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:96770
Xenopus100493178, 398238485516
Zebrafish30701ENSDARG00000031894ZDB-GENE-990714-26ZFIN:ZDB-GENE-990714-26
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395865
Ensembl GeneENSGALG00000010529
KEGGgga:395865

Entry 1

GEISHA Idpgn1c.pk018.g14Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CAAGGACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGAC
ATCAAGTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGC
AGGATTCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACC
ATCGTACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCG
CCACCCATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCA
CCTACAGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTC
CAGGCATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTT
GGCTGGTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACAC
CTCAAGTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAAAC
AGAGCCAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTA
GCAGAGTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCT
Reverse cDNA Template Probeshow
TTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCNTGCTTCAGCCAACAGAGTAACTTAGAGCACCGCTGCCCATACAGCA
CATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATTTAATGGTGCGACAGGATCAATT
TTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGTAATTTCCTTGGTGTATATTTTA
CTAGGTATGAGCTTTTAAACAACTGTCAAAAATTTGAACTACTTTTTAAATAATGGGGTTTATTTTCCTTTTTTTTTTT
TTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTGTTAAACTACTTGTAACAAATAGTGGC
CTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAGTCAGCTGGTCAGTAGCCATGTCAGTC
TTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCAGTGAGTTTTCCTTTTTACCCATCGCC
CTTTTCCTTGTAAAAAGCCCAGCACTTGAATTATTACTTCAATTGTTCTGTATTTGTATCTGTTTTTGTTAGCCTGTTA
GTGGGATTTTATGCCAGTTGTTGAAATGAGCATTGATGTACCCATTTTTTTTAAATAGTAAGGCACAGCCTTTGCCAAA
AATACTGACAACCAATTTTTTTTTTTTTGTCATTCCAGTTTGAGTTAAATGTGCTGAGCATTTGGGTTTTTGTTCGTTT
TTTTTGTTTGTTTGTTCTTTTGTTTTTGTTTTTGTTTTTTTTTTAATAAAAGNCTTTGTAAT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 9
stage 10
stage 12
Head Mesenchyme
Lateral Plate Mesoderm
Midbrain
Paraxial Mesoderm
Primitive Streak
Somites
 
13-18
stage 16
stage 17
stage 17
stage 18
stage 18
Cranial Ganglia
Diencephalon
Ear/Otic Placcode
Eye
Face Mesenchyme
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg Mesenchyme
Limb Buds
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Tail
Wing Mesenchyme
 
19-22
stage 20
stage 21
stage 22
Cranial Ganglia
Eye
Face Mesenchyme
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg AER
Limb Buds
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Wing AER
 

Entry 2

GEISHA IdLef-1.Schmidt.2004Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG
ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA
GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT
TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT
ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC
CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC
AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC
ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG
GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA
GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC
CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA
GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA
AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG
GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT
CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG
AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG
ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT
AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC
GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA
GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT
TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT
AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG
GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG
TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG
TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA
GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
CitationSchmidt, M, Patterson, M, Farrell, E, Munsterberg, A. Dynamic Expression of Lef/Tcf Family Members and B-Catenin During Chick Gastrulation, Neurulation, and Early Limb Development. Dev Dyn. 2004 Mar;229(3):703-7.
CopyrightCopyright © 2004 Wiley-Liss, Inc., A Wiley Company
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AB188385).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XI
Kohler's Sickle
 
1-3
stage 3
Primitive Streak
 
4-6
stage 4
Hensen's Node
Mesoderm, early
Primitive Streak
ingressing mesoderm
7-12
stage 7
stage 8
stage 11
Mesoderm, early
Paraxial Mesoderm
Primitive Streak
Somites
ingressing mesoderm
pm, presegmented mesoderm
presegmented mesoderm
13-18
stage 15
stage 15
Mesoderm, early
Paraxial Mesoderm
Somites
presegmental mesoderm
19-22
stage 20
stage 22
stage 22
stage 22
Eye
Limb Buds
Myotome
Spinal Ganglia and Nerves
Wing AER
axons
fore limb
hind limb

Entry 3

GEISHA IdLEF1.Skromne.2001Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG
ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA
GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT
TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT
ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC
CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC
AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC
ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG
GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA
GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC
CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA
GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA
AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG
GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT
CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG
AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG
ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT
AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC
GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA
GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT
TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT
AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG
GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG
TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG
TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA
GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
CitationSkromne I, Stern CD. Interactions between Wnt and Vg1 signalling pathways initiate primitive streak formation in the chick embryo. Development. 2001 Aug;128(15):2915-27
CopyrightPrinted in Great Britain © The Company of Biologists Limited 2001
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205013).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XI
stage XIII
Epiblast
Kohler's Sickle
 
1-3
stage 2
stage 3
Primitive Streak
 
4-6
stage 4
stage 4
stage 6
Lateral Plate Mesoderm
Paraxial Mesoderm
Primitive Streak
 
7-11
stage 11
Central Nervous System
Paraxial Mesoderm
Primitive Streak
Somites
Brain

Entry 4

GEISHA IdLef1.Theodosiou.2003Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG
ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA
GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT
TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT
ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC
CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC
AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC
ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG
GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA
GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC
CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA
GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA
AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG
GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT
CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG
AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG
ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT
AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC
GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA
GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT
TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT
AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG
GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG
TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG
TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA
GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
CitationTheodosiou NA, Tabin CJ. Wnt signaling during development of the gastrointestinal tract. Dev Biol. 2003 Jul 15;259(2):258-71.
CopyrightCopyright © 2003 Elsevier Science (USA). All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205013). Authors indicated probe was ~1 kb.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
stage 22
stage 24
stage 24
Duodenum
Hindgut
 
31-32
stage 32
stage 32
Duodenum
Hindgut
 

Entry 5

GEISHA IdLEF1.Quinlan.2009Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG
ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA
GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT
TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT
ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC
CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC
AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC
ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG
GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA
GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC
CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA
GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA
AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG
GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT
CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG
AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG
ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT
AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC
GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA
GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT
TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT
AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG
GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG
TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG
TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA
GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
CitationQuinlan R, Graf M, Mason I, Lumsden A, Kiecker C. Complex and dynamic patterns of Wnt pathway gene expression in the developing chick forebrain. Neural Dev. 2009 Sep 4;4:35.
CopyrightCopyright © 2009 Quinlan et al; licensee BioMed Central Ltd. [This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.]
Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205013.2).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 16
Forebrain
Hindbrain
Midbrain
 
19
stage 19
Forebrain
Hindbrain
Midbrain
 

Entry 6

GEISHA IdLEF1.Olivera-Martinez.2007Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG
ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA
GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT
TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT
ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC
CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC
AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC
ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG
GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA
GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC
CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA
GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA
AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG
GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT
CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG
AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG
ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT
AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC
GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA
GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT
TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT
AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG
GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG
TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG
TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA
GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
CitationOlivera-Martinez I, Storey KG., Wnt signals provide a timing mechanism for the FGF-retinoid differentiation switch during vertebrate body axis extension. Development. 2007 Jun;134(11):2125-35.
CopyrightPublished by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Storey.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_205013)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
stage 10
stage 10
Paraxial Mesoderm
 

Entry 7

GEISHA IdLEF1.Geetha-Loganathan.2009Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGCAGCTGCCGGGGGCCGGGGGCGGCGGGGGGGACCCGGAGCTCTGCGCCACCGACGAGATGATCCCCTTCAAGG
ACGAAGGGGACCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGCCACCCCGAGGAAGAGGGCGACCTGGCCGACATCAA
GTCCTCGCTGGTCAACGAGTCCGAGATCGCGCCCGGCTCCGGCGGGCACGAGGTTTCCAGGCAGACTCCAGCGCAGGAT
TCCTACCATGACAAGGGCAGGGAGCACCCCGAGGAAGGAAAGCATCCCGACGGCGGCTTGTACAGCAAGGGACCATCGT
ACTCTGGTTACTCGGGGTATATCATGATGCCAAATATGAACAACGACCCGTACATGCCTAACGGATCTCTGTCGCCACC
CATCCCCAGAACATCCAACAAGGTGCCAGTGGTACAGCCTTCTCACGCAGTTCACCCCCTCACCCCCCTTATCACCTAC
AGCGATGAGCACTTTTCCCCAGGCTCCCACCCATCTCACATCCCCTCTGACGTCAGCTCCAAGCAAGGCATGTCCAGGC
ATCCTCCAGCTCCTGATATCCCTACCTTCTATCCCTTGTCTCCAGGGGGGGTTGGACAGATAACACCACCTCTTGGCTG
GTTTTCACATCACATGATTCCTGGTCCTCCAGGCCCTCACACAACTGGAATCCCTCACCCAGCTATTGTAACACCTCAA
GTAAAACAAGAACATCCGCACAACGACAGTGAGCTAATGCATGTGAAGCCTCAGCACGAACAGAGGAAAGAACAAGAGC
CAAAAAGACCTCATATTAAGAAACCTCTGAATGCTTTCATGTTGTACATGAAAGAAATGAGAGCGAACGTTGTAGCAGA
GTGTACTCTGAAAGAAAGCGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCTCTCTCTCGTGAAGAACAAGCA
AAATATTATGAACTAGCTCGTAAAGAAAGGCAGCTACACATGCAGCTTTATCCAGGCTGGTCTGCAAGAGACAACTACG
GGAAGAAGAAGAAGAGGAAGAGAGAAAAGTTGCAGGAATCAGCATCAGGTACAGGCCCCAGAATGACAGCTGCCTACAT
CTGAAGCATGGTGGGAAAAGAAATGCTTTCTCAACTTGCAAAGCAAAGGCGGCGACACCAGGACCCCTGCTGGAGATGG
AAGCTTGTTAAACCCTAGGTGTGTCCTTCATCCACACAGACCACCCCCAAGGAGTCTGTCTAGGATGTCATTCACCCTG
ATGTCACTGCTAAAGACACTGAATCATAAAGACAATCACTGCCAAAATCCTTCACTATCACGAGGTCCAGCCCTGATAT
AAATAGAGCGAATAAGCTCCTGGGTCAGCAGAGCAGCTTTTGTCTTCACTCCACCTCTGCCTTGCACTCTTAAGCCCTC
GTCTCATCTGTGTCCATGTTGAGTCAGCAAACAAAGTAGCGTGGCTGTCTCTGCCTGCTTCAGCCAACAGAGTAACTTA
GAGCACCGCTGCCCATACAGCACATCGAGGAATGGAATTTGCCTGGACCAGGATGACACACTCAAAACTTCTTTTTATT
TAATGGTGCGACAGGATCAATTTTGGTTTTAGCTTTTTTAAGAAACTTGAATGCTTTTGTATTTTAACTTTTAGTTTGT
AATTTCCTTGGTGTATATTTTACTAGGTATGAGCTTTTAAACAACTGTCAAAAATCTGAACTACTTTTTAAATAATGGG
GTTTATTTTCCTTTTTTTTTTTTTTTTTTTTCTCTCCTGCCAGAGGAAAAGCCTGTATGGAAAAAGGTGGCTTTTTTTG
TTAAACTACTTGTAACAAATAGTGGCCTCTCAGTCTATATAATACAGTGTCATATAGAACTAAATAAATGTAACAACAG
TCAGCTGGTCAGTAGCCATGTCAGTCTTGCATCACCTCCTCTGTAAACATAAGCAATACATCCAGCAAATCTGACTGCA
GTGAGTTCTCCTTCTTACCCATCGCCCTTCTGCTTGTAAAAAGCCCAGCACTTGAATTATTACTT
CitationGeetha-Loganathan, P, Nimmagadda, S, Antoni, L, Fu, K, Whiting, C, Francis-West, P and Richman, J. Expression of WNT signalling pathway genes during chicken craniofacial development. DEVELOPMENTAL DYNAMICS Volume 238, Issue 5, May 2009, Pages: 1150–1165.
CopyrightDev. Dyn Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205013).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 15
stage 17
stage 17
Eye
Face Mesenchyme
Head Mesenchyme
Pharyngeal Arches and Clefts
 
19-24
stage 21
stage 21
stage 21
stage 21
stage 21
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
Ear/Otic Placode
Eye
Face Mesenchyme
Forebrain
Head Mesenchyme
Midbrain
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
 
25-28
stage 28
stage 28
stage 28
stage 28
Eye
Face Mesenchyme
Forebrain
Head Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2694

Mouse

EmageMGI:96770
EurexpressMGI:96770
MGI GXDMGI:96770

Frog

Xenbase485516

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990714-26
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