GEISHA - A Chicken Embryo Gene Expression Database
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PRPH2
peripherin 2

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolPRPH2
Official Full Nameperipherin 2
CGNC ID49540
also known asCRDS1, RDS, peripherin-2, peripherin-2|peripherin 2 (retinal degeneration, slow)|photoreceptor outer segment membrane glycoprotein 1|retinal degeneration slow protein|retinal degeneration, slow, Peripherin-2 , Retinal degeneration slow protein, Photoreceptor outer segment membrane glycoprotein 1 (CRDS1)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205038
PolypeptideNP_990369
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.532
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5961ENSG00000112619MIM:613105MIM:179605
Mouse19133ENSMUSG00000023978All phenotypic alleles (6):Spontaneous(1) Chemically induced(1) Targeted, knock-out(1) Targeted, other(3) MGI:102791
Xenopus100491776, 379506985593
Zebrafish559209, 58085ENSDARG00000014840, ENSDARG00000038018ZDB-GENE-000616-9, ZDB-GENE-000616-8ZFIN:ZDB-GENE-000616-9, ZFIN:ZDB-GENE-000616-8
Gene Ontology
Molecular Function
Biological Processcell adhesion, retina development in camera-type eye, visual perception
Cellular Componentintegral component of membrane
Links to other databases
Entrez Gene395899
Ensembl GeneENSGALG00000009909
KEGGgga:395899
GEISHA IdPeripherin.Bradford.2005Data SourcePublication
Complete cDNA Template Probeshow
TCCTTTGCTTGGAAGGAACCACCAGAAATAGTTGTAGGTGCTAATTGCCCACTATTCTTACTAATGTGAATTTGTGAAT
TTGGACCTTTGAATATCTACTTGCTTGAACCGAAGCGTGGGGAGCTCAAGATGGAGGGACCGTGCAGCACTTCGCTTCG
GGCTGCATCAGCCGGAGCTTTTCTAAACGCCTGAATGGTTCTTTCTCGAATCGCTTACACGGAGAAGAGGGGTTCAGGC
TGCAAAAGCTTTCAGCGTCTCACGTATTGCGACGATGGCACTGCTGAAAGTCAAATTCAACCAGAAGAAACGGGTAAAA
CTAGCCCAGGGGCTATGGCTCATGAACTGGTTTTCAGTCTTTGCTGGAATCATCGTTTTTAGCATGGGGTTGTTCCTCA
AGATTGAGCTCCGGAAGCGAAGCGAAGTGATGGACAATTCTGAAAGCCATTTTGTGCCCAATTCTTTGATATTGATGGG
TATATTATCCTGCGCCTTCAATGGTTTTGCTGGCAAAATTTGTTACGATTCTCTGGATCCCGCTAAATTTGCCAAGTGG
AAGCCTTTGCTGAAACCTTACCTGGCACTATGTTTCTTCTTCAACATACTCCTCTTCTTTGTCGCTCTGATTTGCTTTC
TCATGCGGGGCTCCCTGGAGAGCACGCTGGCTCAGGGGCTGAAGAACAGCATGAAGTTCTACCGGGACACAGACACCCC
TGGAAGGTGCTTCATGAAGAAGACAATCGACATGCTCCAAATCGAGTTCAAGTGCTGTGGGAACAATGGCTTCAAAGAC
TGGTTTGAAATTCAGTGGATCAGCAACAGATACCTGGACTTCAGCTCCAAAGAAGTGAAAGATCGAATCAAAAGCAACG
TTGATGGACGGTACCTGGTTGATGGTGTCCCCTTCAGCTGCTGCAACCCCAGCTCCCCGAGGCCCTGCATCCAGTACCA
GGTCACCAACAACTCGGCTCACTACAGCTACGACTACCAGACGGAGGAGCTCAACCTCTGGGGCCGTGGCTGCCGGGAA
GCCCTCCTGCACTACTACAGCAGCATGATGAGCTCCATGGGTGCCGTTGTCCTCCTTGTCTGGCTTTTTGAGATGTCTG
TGATGGTTGGCTTGCGTCTTTTGCACACCTCTCTGGAAAGCATCGCAAATCCTGAAGACCCTGAGTGTGAAAGTGAAGG
GTGGATTCTAGAGAACAGCCTGAAAGACACTCTGAAGTCTGCGCTGGAGAGCTTGAAAAAGATTGGTAAGTTCAATCAG
GTGGAAGCAGGTGCCGAAGGGGCTGAAGGAGAAGAAGCTGGGAAGACTCCAGCCATCACAACAGTCAGTTGAGCTTCTA
AATGATGCGAACTCTGATCAGAGGAATGAAAAAACTGAGGATTGTGAATACCTACTTTTTAAAAGCTACGTATCAACCA
TCAGAATACACGTTTCTACACACGCTATCTTTTTTATTATTATTATACATGCATACGGAAGGATACAGCATAGCGCACC
TTGGGATAATGCATTTATCCTCTCAGTGAGTACACCAGATTCATAACTTCTGGGGGAAAATGACCCCACTAGGACTTTC
AATACTTACGTGTTCCCTTACCAGGGACTGCTAGCATTAAAAAGAAATCATCATAATTGTTGGCATCACACTGATCCGT
TCCATCTTATCTTGAAATTAAAAGTGGAATTTGAAATGTTAGTATTTTTTCTCAAGTTGGCTTGCCATCATACTTGATG
TACGTTAACCTACAAAGACAAATGTCTTGGTTTTCTGGAGAGTAACGTGTTAAAAGTCAAAGGAAGAATAATTTCCAGA
AGTGTATATAATAACCTAGTGTTTCGACAAACCTCTCATATAATGTGTTTTTTTTTTTTTTGTTGATGTGCTAAGCAGT
GGTATTTCCTGCTGTATTCTTAAGATGTACTTAATAGAACAAAACAAAAAGTTATTCTGAGAACTTCAGTACTAAACAA
AAATTGTAACTTAAGAACAGAGCAAGCATGAAAACAACACCAAGGTAAGATTTATGGGTTTTGTTCTTGGG
CitationBradford RL, Wang C, Zack DJ, Adler R. Roles of cell-intrinsic and microenvironmental factors in photoreceptor cell differentiation. Dev Biol. 2005 Oct 1;286(1):31-45.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (NM_205038) using the accession provided by the authors.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 41
stage 42
stage 43
stage 44
stage 44
Retina
Photoreceptor layer
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.532

Mouse

EmageMGI:102791
EurexpressMGI:102791
MGI GXDMGI:102791

Frog

Xenbase985593

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-000616-9, ZDB-GENE-000616-8
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