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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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JAG1
jagged 1

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	JAG1
Official Full Name	jagged 1
CGNC ID	6856
also known as	protein jagged-1\|C-Serate-1 protein\|jagged 1 (Alagille syndrome)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_415035
Polypeptide	XP_415035
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.53615

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	182	ENSG00000101384	MIM:118450	MIM:601920
Mouse	16449	ENSMUSG00000027276	All phenotypic alleles (15):Chemically induced(5) Targeted, knock-out(3) Targeted, other(5) Gene trapped(2)	MGI:1095416
Xenopus	100486874, 399110			485661
Zebrafish	140423, 140421	ENSDARG00000013168, ENSDARG00000030289	ZDB-GENE-011128-4, ZDB-GENE-011128-2	ZFIN:ZDB-GENE-011128-4, ZFIN:ZDB-GENE-011128-2

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	396043
Ensembl Gene
KEGG	gga:396043

Entry 1

GEISHA Id	JAG1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GGTGAAAGGTGAGGTGGCGTC
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGGGGCAGGAACACTGGTATTTATCG	cDNA Template Length	906
Forward cDNA Template Probe	show TTTTTATCGGCAGAATACNGGGCAGTGTTGCTGCAGGTACACCATTCAACAGGGTGGGTGGGTTCCACAGTAGTTCAGG TCTTTGTCACAGAGCTGACCACCCCAGTTGGTTTCACAGAGGCACTGCCATGGTTCAATGCAAGTGCCATGGACACATC CCGGGTGTGGAATGCACTTATCACAGTACTGGCCTTGCCATCCATACTGACACCTGCACTCTCCTGGAACTGTGCAAGA ACCATGCTTGGGGCTACATCCCTGACGACAAATAGCTTTGTTGCATTCTGGTCCCGTCCAGCCTTCCAAGCAGGTTTTG TTGCCATTCTGGTCACAGGTATGGTGAGTGAAGAAGTCATCTCTCGGTCGACAAAACTTGTTGCATCCAAAGCCATAGT AATGTTCTGCGCAAGTCACACGGATTTGATACTCAAAGTGGGCAGCTCCTGTGTTATGTTTCAACGTCTGCCACTGACG GCTTGGATTGATCATGCCAGAGTGGGATGCCTTCTCAATTATGCGATCGGGATTAGTAGAGTTATCATTGTAATCCCAT GCCTCAACAAGCAACGTGTAGGATCTCGGCCAGGCGAAGCTGAAAGGGATAACAATCCGGTTCTTTTCATTATTCCGGC TGTACTTTAAATTGAAGGTATTCCCGCCGATGACAGGGGTGGATTTGGATCCGAAGCTGCAAGGGCCGCCAGCAGTGAC CCGCGACTGGTACTCCTTCAGGCAAACTTTAAAGTAGGTGTCACACTCATCTCTGGTGCACTTTTTATCTCCGGGGTTT CGAGTGCCGTCGCAGCAGTTCCCGTTCTGCAGCACGCCGTTCACATTCTGCACGGATAAGATCTCCAGCTCGAACTGTC CCGATGCTGACGCCACCTCCCNTTTCCACCAAAA

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

stage 6

Early Mesoderm
Lateral Plate Mesoderm
Primitive Streak

Low level expression.

7-12

stage 7

stage 9

stage 10

stage 11

stage 12

Anterior/Second Heart Field
Ear/Otic Placode
Head Mesenchyme
Heart Tube
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak

Dorsal view.
Low level expression.
Ventral view.

13-18

stage 16

stage 17

Allantois
Anterior/Second Heart Field
Ear/Otic Placode
Eye
Heart Tube
Hindbrain
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Pineal Gland
Spinal Cord

19-24

stage 21

stage 22

stage 23

stage 24

Allantois
Anterior/Second Heart Field
Atria
Ear/Otic Placode
Eye
Forebrain
Hindbrain
Leg Mesenchyme
Mesonephros
Midbrain
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Pineal Gland
Spinal Cord
Spinal Ganglia and Nerves
Ventricles

stage 25

Allantois
Anterior/Second Heart Field
Atria
Ear/Otic Placode
Eye
Hindbrain
Leg Mesenchyme
Mesonephros
Midbrain
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Pineal Gland
Spinal Cord
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme

Entry 2

GEISHA Id	SERRATE1.Sanders.2002	Data Source	Publication
Complete cDNA Template Probe	show ATGCGTGCGGCCCGGCGGGCGGCGGCGCGCTCCCTCGTCCTCTTCCTGGCCCTGCTGGGGCTGCGGGCTCAGGTACGTT CGGGGGGCGGGAGCGGTTCCCGCGGCGTTTGCTGGAGGGGGTCCCGGAGCTGCGGAGGCTGCGGGGCGGCTCGGCGGGA GCGCGGGCGGTGGTGCCGGCTGTCCTGCGGGGAGGGCAGCGGTCCGTGTGGCGAGGCGAGGCGAGGCGAGGTTCCTCGA GGATCCAACGCGGGGCTGCTCGTCCCGTCCCGTGTCGTCCCGTCCGCCGCCCCTCCGAGCTGCAGCGGCCGCTCTGCTG CCGGCGCCGCGCTTCTTCTTCTTCTCTCTCGGAACGAGCAGGTGGCGTCAGCATCGGGACAGTTCGAGCTGGAGATCTT ATCCGTGCAGAATGTGAACGGCGTGCTGCAGAACGGGAACTGCTGCGACGGCACTCGAAACCCCGGAGATAAAAAGTGC ACCAGAGATGAGTGTGACACCTACTTTAAAGTTTGCCTGAAGGAGTACCAGTCGCGGGTCACTGCTGGCGGCCCTTGCA GCTTCGGATCCAAATCCACCCCTGTCATCGGCGGGAATACCTTCAATTTAAAGTACAGCCGGAATAATGAAAAGAACCG GATTGTTATCCCTTTCAGCTTCGCCTGGCCGAGATCCTACACGTTGCTTGTTGAGGCATGGGATTACAATGATAACTCT ACTAATCCCGATCGCATAATTGAGAAGGCATCCCACTCTGGCATGATCAATCCAAGCCGTCAGTGGCAGACGTTGAAAC ATAACACAGGAGCTGCCCACTTTGAGTATCAAATCCGTGTGACTTGCGCAGAACATTACTATGGCTTTGGATGCAACAA GTTTTGTCGACCGAGAGATGACTTCTTCACTCACCATACCTGTGACCAGAATGGCAACAAAACCTGCTTGGAAGGCTGG ACGGGACCAGAATGCAACAAAGCTATTTGTCGTCAGGGATGTAGCCCCAAGCATGGTTCTTGCACAGTTCCAGGAGAGT GCAGGTGTCAATATGGATGGCAAGGCCAGTACTGTGATAAGTGCATTCCACACCCAGGATGTGTCCATGGCACTTGCAT TGAACCATGGCAGTGCCTCTGTGAAACCAACTGGGGTGGTCAGCTCTGTGACAAAGACCTGAACTACTGTGGAACCCAC CCACCCTGTTTGAATGGTGGTACCTGCAGCAACACTGGCCCCGATAAATACCAGTGTTCCTGCCCTGAGGGTTACTCAG GACAGAACTGTGAAATAGCGGAGCACGCGTGCCTCTCTGATCCGTGCCACAACGGAGGAAGCTGCCTAGAAACGTCTAC AGGATTTGAATGTGTGTGTGCACCTGGCTGGGCTGGACCAACTTGCACTGATAATATTGATGATTGTTCTCCAAATCCC TGTGGTCATGGAGGAACTTGCCAAGATCTAGTTGATGGATTTAAGTGTATTTGCCCACCTCAGTGGACTGGCAAAACAT GCCAGCTAGATGCGAATGAATGTGAGGGCAAACCCTGTGTCAATGCCAACTCCTGCAGGAACCTGATTGGCAGCTACTA TTGTGACTGCATTACTGGCTGGTCTGGCCACAACTGTGATATAAATATCAATGATTGTCGTGGACAATGTCAGAATGGA GGATCCTGTCGGGACTTGGTTAATGGTTATCGGTGCATCTGTTCACCTGGCTATGCAGGAGATCACTGTGAGAAAGACA TCAATGAATGTGCAAGTAACCCTTGCATGAATGGGGGTCACTGCCAGGATGAAATCAATGGATTCCAATGTCTGTGTCC TGCTGGTTTCTCAGGAAACCTCTGTCAGCTGGATATAGACTACTGTGAGCCAAACCCTTGCCAGAACGGTGCCCAGTGC TTCAATCTTGCTATGGACTATTTCTGTAACTGCCCTGAAGATTACGAAGGCAAGAACTGCTCCCACCTGAAAGATCACT GCCGCACAACTCCTTGTGAAGTAATCGACAGCTGTACAGTGGCAGTGGCTTCTAACAGCACACCAGAAGGAGTTCGTTA CATTTCTTCAAATGTCTGTGGTCCTCATGGAAAATGCAAGAGCCAAGCAGGTGGAAAATTCACCTGTGAATGCAACAAA GGATTCACTGGCACCTACTGTCATGAGAATATCAATGACTGTGAGAGCAACCCCTGTAAAAATGGTGGCACTTGTATTG ACGGTGTAAACTCCTACAAATGTATTTGTAGTGATGGATGGGAAGGAACATATTGTGAAACAAATATTAATGACTGCAG TAAAAACCCCTGCCACAATGGAGGAACTTGCCGAGACTTGGTCAATGACTTCTTCTGTGAATGTAAAAATGGGTGGAAA GGAAAAACTTGCCACTCTCGTGACAGCCAGTGTGATGAGGCAACATGCAATAATGGAGGAACATGTTATGATGAGGGGG ACACTTTCAAGTGCATGTGTCCTGCAGGATGGGAAGGAGCCACTTGTAATATAGCAAGGAACAGCAGCTGCCTGCCAAA CCCCTGTCACAATGGTGGTACCTGTGTAGTTAGTGGGGATTCTTTCACTTGTGTCTGCAAGGAGGGCTGGGAAGGACCG ACATGCACTCAGAACACAAATGACTGCAGTCCTCATCCTTGTTACAACAGTGGTACTTGTGTGGATGGAGACAACTGGT ACCGCTGTGAGTGCGCTCCCGGCTTCGCAGGTCCCGACTGTAGGATCAACATCAATGAATGTCAGTCTTCACCCTGTGC CTTTGGGGCTACTTGCGTGGATGAAATTAATGGGTACCGTTGCATTTGTCCACCGGGTCGCAGTGGTCCAGGATGCCAG GAAGTTACAGGGAGGCCTTGCTTTACCAGTATTCGAGTAATGCCAGACGGTGCTAAGTGGGATGATGACTGTAATACTT GTCAGTGTTTGAATGGAAAAGTCACCTGTTCTAAGGTTTGGTGTGGTCCTCGACCTTGTATAATACATGCCAAAGGTCA TAATGAATGCCCAGCTGGACATGCTTGTGTTCCTGTTAAAGAAGACCATTGTTTCACTCATCCTTGTGCTGCAGTGGGT GAATGCTGGCCTTCTAATCAACAACCTGTGAAGACCAAATGCAATTCTGATTCTTATTACCAAGATAATTGTGCCAACA TCACCTTCACCTTTAATAAGGAAATGATGGCACCAGGCCTTACCACGGAGCACATTTGCAGTGAATTGAGGAATCTGAA TATCCTGAAGAATGTTTCTGCTGAATATTCCATCTATATTACCTGTGAGCCTTCACACTTGGCAAATAATGAAATACAT GTTGCTATTTCTGCTGAAGATATAGGAGAAGATGAAAACCCAATCAAGGAAATCACAGATAAGATTATTGACCTTGTCA GTAAGCGTGATGGAAACAACACACTAATTGCTGCAGTCGCAGAAGTCAGAGTACAAAGGCGACCAGTTAAGAACAAAAC AGATTTCTTGGTGCCATTACTGAGCTCAGTCTTAACAGTAGCCTGGATCTGCTGTCTGGTAACTGTTTTCTATTGGTGC ATTCAAAAGCGCAGAAAGCAGAGCAGCCATACTCACACAGCATCTGATGACAACACCACCAACAACGTAAGGGAGCAGC TGAATCAGATTAAAAACCCCATAGAGAAACACGGAGCAAATACTGTTCCAATTAAAGACTATGAAAACAAAAACTCTAA AATCGCCAAAATAAGGACGCACAATTCAGAAGTGGAGGAAGATGACATGGACAAACACCAGCAAAAGGCCCGGTTTGCC AAGCAGCCAGCGTACACTTTGGTAGACAGAGATGAAAAGCCACCCAACAGCACACCCACAAAACACCCAAACTGGACAA ATAAACAGGACAACAGAGACTTGGAAAGTGCACAAAGTTTAAATAGAATGGAGTACATTGTATAGCAGACAGTTGGGTG CTGCCATGCAGGGCCTTTAAATATCGTTATAAAGGCACTCAAGAGCTTGTAGTTCTTAAACTGTTGTGTAATATTTGAG TCTAAGGCTATTATTTACTTAGAGTCCCTCTGTTAATTTAAGTTTTGACAAGCTGGCTTACACTGGCAATGATAGTTGC TGTGGTTGGCTGGAATACCAAGTGCTGCATTTCACATCTATGCAAAACTAGTCAAAAGTGCCCTAATGTAAATTCAGCT GTAGCTGATACATCATGGAAACGTTTCATAAGGTATTACATAGCCTTATTACTCTTCCTTAGTGTTAATTTTTTTTTCT GCCAGATGTCCCAATTTATACAGTTTCTTTAGAATAATACATTTTATTTATATTTATTGAATCTGAGTTTTTTGTATAT TGGTTTTATGGTGACGTACAACTAGTTCTGTATTTGAAAGTGCCTTTGCAGCTCGGAACCACAGCAACTATCAAAAATA AGTTTATTATTTATTTTTTTATTGTATTTTTGTTGGGGGAGGGTGGGGGGAACTTGTCAGCAGTTGCTGGTAAATGAAG AATTTAAAGAGGAAAATGTGTCAAAAATAGAAGTTTGTATAGATATGTAAATAATTCTTTTTTATTAATCACTGTGTAT ATTTGATTTATTAACTTAATAATCGAGAGCCTTAAAATATCATTCCTTTTTATTTATATGTATGTGTTTAGAGTTGAAG GTTTTTGATAGCATTGTAAGCTTGTGGCTTCTTCATTTTGGATTTATTTTCTTGTTACATGTTGCCTATATGCCAAAAC TAAGGTGTTCTAAAATAGTTTATTTTTAATAGGACGGGCTTTCATGCCTTGATGCTGGTTTTTGTACAATGTCAAATGT TTGAAACACCTTCCATAGTATCACTTTAAGACTATTTGTAAGTACTGACTGAGGCAGTTTAGATAATTAGACTAGAAAA TTTTTTTTGCTGCTTTAGACTTGAAACCGAGTGACAGGCAGATAATCTGCTAAGAAGCAGTTTAAGGGAACAAAACTGA GCTATTACTTTATGTAGATGAAATGTGAGTGGTTGCATGTAATTAAAATATCAAATTAGCGTGTGAAGTTGGAAACACA GCAATCTTATTTTGTAAATTCTGATTATTTTTTTTCTCACCATGAATATGTAATACTGAACCACTTGTAGATTTGAATT TTTTTGTAATCTACTGCATTTAGGGAGTATTCTAATAAGCTAGTTGTTGAATACTTGAACAGTAGAATGTCCAGTAAGA TCACTGTGTAGGTTTGCCATAGATTACACTGCCCGCCTTAACAAGTGAGGAAATCAAAGTGCTATTACAATGTTTAAGA TCAAAAGGCTTATAAACATACTAATCTCGGTGGTTAACCATTGAGATCATGAAGATACCTTGTATTGTGATATTAGTGT TATATGAAAATGCATCTTTGATGTGTTGTTCCTGGCAATAAATCTTGAAAAGTAATATTTATTAAATTTTTTTGTATGA AAACATAAAAGAGCGTGGAGATTATTGAGCTTGGAACCACTCCCAACTGGTTAGTTGTGCTAAAACAGTGGCAGGTGAT GGCTTACATTTCTAAGACCTGACACTGATTTTGGTGAAGTCTAGTTTTTGTTAGATGATTACATGTTTGTCTAGCTTTC ATTCAAATTGAAGGGGTTCAAAAGCAACCTGGCCCTTGTTCTTGATGTCTTTTGGCTAATGTAACTCTGTGTCCTTTTG AAAAGAGAATGATAATGTGACTGGAATTGTGCAACTAGTTTACTTTGCATGGGCCAATGAGCTACCACCAGATGGTAAC CAAATCTAAGTAGCTAGGCAAGATACAAACTGCTGACCTGGATGGGAAAGGAGCCACAGATTATACTGATGCCTGATGG GCAAAAAAATGCTTCATAAAGCATAAAATAAACTCTTAGAATATTCTGAAATGTCTCAGTGCTTAACTAATGCAGCCCC TCCTGGCTTTGAGGGGCTGGGCGTGGAACTATTGGTCAGCTGAATGATACCCTGCTCTTTATTTTAGCACGTTTCTCAG TGAAGCTTTAACTTTGCTTTGCTAAAGCTGATGGAAACATTAAGTAAGTAACAAACTCAGCTGACAAATAATATGAAAG AGGTTCAGATTCCTTCTTGTATTTCAT
Citation	Sanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50.
Copyright	Copyright © 2002-2011 by the Society for Neuroscience
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI, also known as" Jag 1". The cDNA sequence is the predicted sequence (acc# XM_415035.2).

Stage

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Location (click to highlight)

Comments (click to highlight)

25-28

stage 28

Mesencephalon
Midbrain

Entry 3

GEISHA Id	JAG1.Paxton.2010	Data Source	Publication
Complete cDNA Template Probe	show CCTGTGGTCATGGAGGAACTTGCCAAGATCTAGTTGATGGATTTAAGTGTATTTGCCCACCTCAGTGGACTGGCAAAAC ATGCCAGCTAGATGCGAATGAATGTGAGGGCAAACCCTGTGTCAATGCCAACTCCTGCAGGAACCTGATTGGCAGCTAC TATTGTGACTGCATTACTGGCTGGTCTGGCCACAACTGTGATATAAATATCAATGATTGTCGTGGACAATGTCAGAATG GAGGATCCTGTCGGGACTTGGTTAATGGTTATCGGTGCATCTGTTCACCTGGCTATGCAGGAGATCACTGTGAGAAAGA CATCAATGAATGTGCAAGTAACCCTTGCATGAATGGGGGTCACTGCCAGGATGAAATCAATGGATTCCAATGTCTGTGT CCTGCTGGTTTCTCAGGAAACCTCTGTCAGCTGGATATAGACTACTGTGAGCCAAACCCTTGCCAGAACGGTGCCCAGT GCTTCAATCTTGCTATGGACTATTTCTGTAACTGCCCTGAAGATTACGAAGGCAAGAACTGCTCCCACCTGAAAGATCA CTGCCGCACAACTCCTTGTGAAGTAATCGACAGCTGTACAGTGGCAGTGGCTTCTAACAGCACACCAGAAGGAGTTCGT TACATTTCTTCAAATGTCTGTGGTCCTCATGGAAAATGCAAGAGCCAAGCAGGTGGAAAATTCACCTGTGAATGCAACA AAGGATTCACTGGCACC
Citation	Paxton CN, Bleyl SB, Chapman SC, Schoenwolf GC. Identification of differentially expressed genes in early inner ear development. Gene Expr Patterns. 2010 Jan;10(1):31-43. Epub 2009 Nov 11.
Copyright	2009 Elsevier B.V. All rights reserved.
Comments	The cDNA template used to generate the probe was obtained by PCR as described Jag1 (5-cctgtggtcatggaggaact-3; 5-ggtgccagtgaatcctttgt-3)

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

Epiblast
Hensen's Node
Primitive Streak

7-12

stage 7

stage 9

stage 11

Anterior Intestinal Portal
Anterior/Second Heart Field
Early Mesoderm
Epiblast
Heart Tube
Neural Plate/Tube
Splanchnic Mesoderm

13-18

stage 15

Ear/Otic Placode
Forebrain
Head Mesenchyme
Heart Tube
Lens
Mesonephros
Midbrain
Neural Plate/Tube
Pineal Gland

stage 19

Allantois
Ear/Otic Placode
Heart Tube
Hindbrain
Lens
Mesonephros
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Pineal Gland
Pronephros

Entry 4

GEISHA Id	SER1.Sienknecht.2009	Data Source	Publication
Complete cDNA Template Probe	show ATGCGTGCGGCCCGGCGGGCGGCGGCGCGCTCCCTCGTCCTCTTCCTGGCCCTGCTGGGGCTGCGGGCTCAGGTACGTT CGGGGGGCGGGAGCGGTTCCCGCGGCGTTTGCTGGAGGGGGTCCCGGAGCTGCGGAGGCTGCGGGGCGGCTCGGCGGGA GCGCGGGCGGTGGTGCCGGCTGTCCTGCGGGGAGGGCAGCGGTCCGTGTGGCGAGGCGAGGCGAGGCGAGGTTCCTCGA GGATCCAAGTGCCAGCTGCCGCAGGTTGTGTTTGGGGTGAAAGGTGAGGTGGCGTCAGCATCGGGACAGTTCGAGCTGG AGATCTTATCCGTGCAGAATGTGAACGGCGTGCTGCAGAACGGGAACTGCTGCGACGGCACTCGAAACCCCGGAGATAA AAAGTGCACCAGAGATGAGTGTGACACCTACTTTAAAGTTTGCCTGAAGGAGTACCAGTCGCGGGTCACTGCTGGCGGC CCTTGCAGCTTCGGATCCAAATCCACCCCTGTCATCGGCGGGAATACCTTCAATTTAAAGTACAGCCGGAATAATGAAA AGAACCGGATTGTTATCCCTTTCAGCTTCGCCTGGCCGAGATCCTACACGTTGCTTGTTGAGGCATGGGATTACAATGA TAACTCTACTAATCCCGATCGCATAATTGAGAAGGCATCCCACTCTGGCATGATCAATCCAAGCCGTCAGTGGCAGACG TTGAAACATAACACAGGAGCTGCCCACTTTGAGTATCAAATCCGTGTGACTTGCGCAGAACATTACTATGGCTTTGGAT GCAACAAGTTTTGTCGACCGAGAGATGACTTCTTCACTCACCATACCTGTGACCAGAATGGCAACAAAACCTGCTTGGA AGGCTGGACGGGACCAGAATGCAACAAAGCTATTTGTCGTCAGGGATGTAGCCCCAAGCATGGTTCTTGCACAGTTCCA GGAGAGTGCAGGTGTCAATATGGATGGCAAGGCCAGTACTGTGATAAGTGCATTCCACACCCAGGATGTGTCCATGGCA CTTGCATTGAACCATGGCAGTGCCTCTGTGAAACCAACTGGGGTGGTCAGCTCTGTGACAAAGACCTGAACTACTGTGG AACCCACCCACCCTGTTTGAATGGTGGTACCTGCAGCAACACTGGCCCCGATAAATACCAGTGTTCCTGCCCTGAGGGT TACTCAGGACAGAACTGTGAAATAGCGGAGCACGCGTGCCTCTCTGATCCGTGCCACAACGGAGGAAGCTGCCTAGAAA CGTCTACAGGATTTGAATGTGTGTGTGCACCTGGCTGGGCTGGACCAACTTGCACTGATAATATTGATGATTGTTCTCC AAATCCCTGTGGTCATGGAGGAACTTGCCAAGATCTAGTTGATGGATTTAAGTGTATTTGCCCACCTCAGTGGACTGGC AAAACATGCCAGCTAGATGCGAATGAATGTGAGGGCAAACCCTGTGTCAATGCCAACTCCTGCAGGAACCTGATTGGCA GCTACTATTGTGACTGCATTACTGGCTGGTCTGGCCACAACTGTGATATAAATATCAATGATTGTCGTGGACAATGTCA GAATGGAGGATCCTGTCGGGACTTGGTTAATGGTTATCGGTGCATCTGTTCACCTGGCTATGCAGGAGATCACTGTGAG AAAGACATCAATGAATGTGCAAGTAACCCTTGCATGAATGGGGGTCACTGCCAGGATGAAATCAATGGATTCCAATGTC TGTGTCCTGCTGGTTTCTCAGGAAACCTCTGTCAGCTGGATATAGACTACTGTGAGCCAAACCCTTGCCAGAACGGTGC CCAGTGCTTCAATCTTGCTATGGACTATTTCTGTAACTGCCCTGAAGATTACGAAGGCAAGAACTGCTCCCACCTGAAA GATCACTGCCGCACAACTCCTTGTGAAGTAATCGACAGCTGTACAGTGGCAGTGGCTTCTAACAGCACACCAGAAGGAG TTCGTTACATTTCTTCAAATGTCTGTGGTCCTCATGGAAAATGCAAGAGCCAAGCAGGTGGAAAATTCACCTGTGAATG CAACAAAGGATTCACTGGCACCTACTGTCATGAGAATATCAATGACTGTGAGAGCAACCCCTGTAAAAATGGTGGCACT TGTATTGACGGTGTAAACTCCTACAAATGTATTTGTAGTGATGGATGGGAAGGAACATATTGTGAAACAAATATTAATG ACTGCAGTAAAAACCCCTGCCACAATGGAGGAACTTGCCGAGACTTGGTCAATGACTTCTTCTGTGAATGTAAAAATGG GTGGAAAGGAAAAACTTGCCACTCTCGTGACAGCCAGTGTGATGAGGCAACATGCAATAATGGAGGAACATGTTATGAT GAGGGGGACACTTTCAAGTGCATGTGTCCTGCAGGATGGGAAGGAGCCACTTGTAATATAGCAAGGAACAGCAGCTGCC TGCCAAACCCCTGTCACAATGGTGGTACCTGTGTAGTTAGTGGGGATTCTTTCACTTGTGTCTGCAAGGAGGGCTGGGA AGGACCGACATGCACTCAGAACACAAATGACTGCAGTCCTCATCCTTGTTACAACAGTGGTACTTGTGTGGATGGAGAC AACTGGTACCGCTGTGAGTGCGCTCCCGGCTTCGCAGGTCCCGACTGTAGGATCAACATCAATGAATGTCAGTCTTCAC CCTGTGCCTTTGGGGCTACTTGCGTGGATGAAATTAATGGGTACCGTTGCATTTGTCCACCGGGTCGCAGTGGTCCAGG ATGCCAGGAAGTTACAGGGAGGCCTTGCTTTACCAGTATTCGAGTAATGCCAGACGGTGCTAAGTGGGATGATGACTGT AATACTTGTCAGTGTTTGAATGGAAAAGTCACCTGTTCTAAGGTTTGGTGTGGTCCTCGACCTTGTATAATACATGCCA AAGGTCATAATGAATGCCCAGCTGGACATGCTTGTGTTCCTGTTAAAGAAGACCATTGTTTCACTCATCCTTGTGCTGC AGTGGGTGAATGCTGGCCTTCTAATCAACAACCTGTGAAGACCAAATGCAATTCTGATTCTTATTACCAAGATAATTGT GCCAACATCACCTTCACCTTTAATAAGGAAATGATGGCACCAGGCCTTACCACGGAGCACATTTGCAGTGAATTGAGGA ATCTGAATATCCTGAAGAATGTTTCTGCTGAATATTCCATCTATATTACCTGTGAGCCTTCACACTTGGCAAATAATGA AATACATGTTGCTATTTCTGCTGAAGATATAGGAGAAGATGAAAACCCAATCAAGGAAATCACAGATAAGATTATTGAC CTTGTCAGTAAGCGTGATGGAAACAACACACTAATTGCTGCAGTCGCAGAAGTCAGAGTACAAAGGCGACCAGTTAAGA ACAAAACAGATTTCTTGGTGCCATTACTGAGCTCAGTCTTAACAGTAGCCTGGATCTGCTGTCTGGTAACTGTTTTCTA TTGGTGCATTCAAAAGCGCAGAAAGCAGAGCAGCCATACTCACACAGCATCTGATGACAACACCACCAACAACGTAAGG GAGCAGCTGAATCAGATTAAAAACCCCATAGAGAAACACGGAGCAAATACTGTTCCAATTAAAGACTATGAAAACAAAA ACTCTAAAATCGCCAAAATAAGGACGCACAATTCAGAAGTGGAGGAAGATGACATGGACAAACACCAGCAAAAGGCCCG GTTTGCCAAGCAGCCAGCGTACACTTTGGTAGACAGAGATGAAAAGCCACCCAACAGCACACCCACAAAACACCCAAAC TGGACAAATAAACAGGACAACAGAGACTTGGAAAGTGCACAAAGTTTAAATAGAATGGAGTACATTGTATAGCAGACAG TTGGGTGCTGCCATGCAGGGCCTTTAAATATCGTTATAAAGGCACTCAAGAGCTTGTAGTTCTTAAACTGTTGTGTAAT ATTTGAGTCTAAGGCTATTATTTACTTAGAGTCCCTCTGTTAATTTAAGTTTTGACAAGCTGGCTTACACTGGCAATGA TAGTTGCTGTGGTTGGCTGGAATACCAAGTGCTGCATTTCACATCTATGCAAAACTAGTCAAAAGTGCCCTAATGTAAA TTCAGCTGTAGCTGATACATCATGGAAACGTTTCATAAGGTATTACATAGCCTTATTACTCTTCCTTAGTGTTAATTTT TTTTTCTGCCAGATGTCCCAATTTATACAGTTTCTTTAGAATAATACATTTTATTTATATTTATTGAATCTGAGTTTTT TGTATATTGGTTTTATGGTGACGTACAACTAGTTCTGTATTTGAAAGTGCCTTTGCAGCTCGGAACCACAGCAACTATC AAAAATAAGTTTATTATTTATTTTTTTATTGTATTTTTGTTGGGGGAGGGTGGGGGGAACTTGTCAGCAGTTGCTGGTA AATGAAGAATTTAAAGAGGAAAATGTGTCAAAAATAGAAGTTTGTATAGATATGTAAATAATTCTTTTTTATTAATCAC TGTGTATATTTGATTTATTAACTTAATAATCGAGAGCCTTAAAATATCATTCCTTTTTATTTATATGTATGTGTTTAGA GTTGAAGGTTTTTGATAGCATTGTAAGCTTGTGGCTTCTTCATTTTGGATTTATTTTCTTGTTACATGTTGCCTATATG CCAAAACTAAGGTGTTCTAAAATAGTTTATTTTTAATAGGACGGGCTTTCATGCCTTGATGCTGGTTTTTGTACAATGT CAAATGTTTGAAACACCTTCCATAGTATCACTTTAAGACTATTTGTAAGTACTGACTGAGGCAGTTTAGATAATTAGAC TAGAAAATTTTTTTTGCTGCTTTAGACTTGAAACCGAGTGACAGGCAGATAATCTGCTAAGAAGCAGTTTAAGGGAACA AAACTGAGCTATTACTTTATGTAGATGAAATGTGAGTGGTTGCATGTAATTAAAATATCAAATTAGCGTGTGAAGTTGG AAACACAGCAATCTTATTTTGTAAATTCTGATTATTTTTTTTCTCACCATGAATATGTAATACTGAACCACTTGTAGAT TTGAATTTTTTTGTAATCTACTGCATTTAGGGAGTATTCTAATAAGCTAGTTGTTGAATACTTGAACAGTAGAATGTCC AGTAAGATCACTGTGTAGGTTTGCCATAGATTACACTGCCCGCCTTAACAAGTGAGGAAATCAAAGTGCTATTACAATG TTTAAGATCAAAAGGCTTATAAACATACTAATCTCGGTGGTTAACCATTGAGATCATGAAGATACCTTGTATTGTGATA TTAGTGTTATATGAAAATGCATCTTTGATGTGTTGTTCCTGGCAATAAATCTTGAAAAGTAATATTTATTAAATTTTTT TGTATGAAAACATAAAAGAGCGTGGAGATTATTGAGCTTGGAACCACTCCCAACTGGTTAGTTGTGCTAAAACAGTGGC AGGTGATGGCTTACATTTCTAAGACCTGACACTGATTTTGGTGAAGTCTAGTTTTTGTTAGATGATTACATGTTTGTCT AGCTTTCATTCAAATTGAAGGGGTTCAAAAGCAACCTGGCCCTTGTTCTTGATGTCTTTTGGCTAATGTAACTCTGTGT CCTTTTGAAAAGAGAATGATAATGTGACTGGAATTGTGCAACTAGTTTACTTTGCATGGGCCAATGAGCTACCACCAGA TGGTAACCAAATCTAAGTAGCTAGGCAAGATACAAACTGCTGACCTGGATGGGAAAGGAGCCACAGATTATACTGATGC CTGATGGGCAAAAAAATGCTTCATAAAGCATAAAATAAACTCTTAGAATATT
Citation	Sienknecht UJ, Fekete DM. Mapping of Wnt, frizzled, and Wnt inhibitor gene expression domains in the avian otic primordium. J Comp Neurol. 2009 Dec 20;517(6):751-64.
Copyright	Copyright © (2002 Wiley-Liss); This material is used by permission of Wiley-Liss, Inc., a subsidiary of John Wiley & Sons, Inc.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #X95283.1 ).

no images

Entry 5

GEISHA Id	SERRATE1.Daudet.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGCGTGCGGCCCGGCGGGCGGCGGCGCGCTCCCTCGTCCTCTTCCTGGCCCTGCTGGGGCTGCGGGCTCAGGTACGTT CGGGGGGCGGGAGCGGTTCCCGCGGCGTTTGCTGGAGGGGGTCCCGGAGCTGCGGAGGCTGCGGGGCGGCTCGGCGGGA GCGCGGGCGGTGGTGCCGGCTGTCCTGCGGGGAGGGCAGCGGTCCGTGTGGCGAGGCGAGGCGAGGCGAGGTTCCTCGA GGATCCAAGTGCCAGCTGCCGCAGGTTGTGTTTGGGGTGAAAGGTGAGGTGGCGTCAGCATCGGGACAGTTCGAGCTGG AGATCTTATCCGTGCAGAATGTGAACGGCGTGCTGCAGAACGGGAACTGCTGCGACGGCACTCGAAACCCCGGAGATAA AAAGTGCACCAGAGATGAGTGTGACACCTACTTTAAAGTTTGCCTGAAGGAGTACCAGTCGCGGGTCACTGCTGGCGGC CCTTGCAGCTTCGGATCCAAATCCACCCCTGTCATCGGCGGGAATACCTTCAATTTAAAGTACAGCCGGAATAATGAAA AGAACCGGATTGTTATCCCTTTCAGCTTCGCCTGGCCGAGATCCTACACGTTGCTTGTTGAGGCATGGGATTACAATGA TAACTCTACTAATCCCGATCGCATAATTGAGAAGGCATCCCACTCTGGCATGATCAATCCAAGCCGTCAGTGGCAGACG TTGAAACATAACACAGGAGCTGCCCACTTTGAGTATCAAATCCGTGTGACTTGCGCAGAACATTACTATGGCTTTGGAT GCAACAAGTTTTGTCGACCGAGAGATGACTTCTTCACTCACCATACCTGTGACCAGAATGGCAACAAAACCTGCTTGGA AGGCTGGACGGGACCAGAATGCAACAAAGCTATTTGTCGTCAGGGATGTAGCCCCAAGCATGGTTCTTGCACAGTTCCA GGAGAGTGCAGGTGTCAATATGGATGGCAAGGCCAGTACTGTGATAAGTGCATTCCACACCCAGGATGTGTCCATGGCA CTTGCATTGAACCATGGCAGTGCCTCTGTGAAACCAACTGGGGTGGTCAGCTCTGTGACAAAGACCTGAACTACTGTGG AACCCACCCACCCTGTTTGAATGGTGGTACCTGCAGCAACACTGGCCCCGATAAATACCAGTGTTCCTGCCCTGAGGGT TACTCAGGACAGAACTGTGAAATAGCGGAGCACGCGTGCCTCTCTGATCCGTGCCACAACGGAGGAAGCTGCCTAGAAA CGTCTACAGGATTTGAATGTGTGTGTGCACCTGGCTGGGCTGGACCAACTTGCACTGATAATATTGATGATTGTTCTCC AAATCCCTGTGGTCATGGAGGAACTTGCCAAGATCTAGTTGATGGATTTAAGTGTATTTGCCCACCTCAGTGGACTGGC AAAACATGCCAGCTAGATGCGAATGAATGTGAGGGCAAACCCTGTGTCAATGCCAACTCCTGCAGGAACCTGATTGGCA GCTACTATTGTGACTGCATTACTGGCTGGTCTGGCCACAACTGTGATATAAATATCAATGATTGTCGTGGACAATGTCA GAATGGAGGATCCTGTCGGGACTTGGTTAATGGTTATCGGTGCATCTGTTCACCTGGCTATGCAGGAGATCACTGTGAG AAAGACATCAATGAATGTGCAAGTAACCCTTGCATGAATGGGGGTCACTGCCAGGATGAAATCAATGGATTCCAATGTC TGTGTCCTGCTGGTTTCTCAGGAAACCTCTGTCAGCTGGATATAGACTACTGTGAGCCAAACCCTTGCCAGAACGGTGC CCAGTGCTTCAATCTTGCTATGGACTATTTCTGTAACTGCCCTGAAGATTACGAAGGCAAGAACTGCTCCCACCTGAAA GATCACTGCCGCACAACTCCTTGTGAAGTAATCGACAGCTGTACAGTGGCAGTGGCTTCTAACAGCACACCAGAAGGAG TTCGTTACATTTCTTCAAATGTCTGTGGTCCTCATGGAAAATGCAAGAGCCAAGCAGGTGGAAAATTCACCTGTGAATG CAACAAAGGATTCACTGGCACCTACTGTCATGAGAATATCAATGACTGTGAGAGCAACCCCTGTAAAAATGGTGGCACT TGTATTGACGGTGTAAACTCCTACAAATGTATTTGTAGTGATGGATGGGAAGGAACATATTGTGAAACAAATATTAATG ACTGCAGTAAAAACCCCTGCCACAATGGAGGAACTTGCCGAGACTTGGTCAATGACTTCTTCTGTGAATGTAAAAATGG GTGGAAAGGAAAAACTTGCCACTCTCGTGACAGCCAGTGTGATGAGGCAACATGCAATAATGGAGGAACATGTTATGAT GAGGGGGACACTTTCAAGTGCATGTGTCCTGCAGGATGGGAAGGAGCCACTTGTAATATAGCAAGGAACAGCAGCTGCC TGCCAAACCCCTGTCACAATGGTGGTACCTGTGTAGTTAGTGGGGATTCTTTCACTTGTGTCTGCAAGGAGGGCTGGGA AGGACCGACATGCACTCAGAACACAAATGACTGCAGTCCTCATCCTTGTTACAACAGTGGTACTTGTGTGGATGGAGAC AACTGGTACCGCTGTGAGTGCGCTCCCGGCTTCGCAGGTCCCGACTGTAGGATCAACATCAATGAATGTCAGTCTTCAC CCTGTGCCTTTGGGGCTACTTGCGTGGATGAAATTAATGGGTACCGTTGCATTTGTCCACCGGGTCGCAGTGGTCCAGG ATGCCAGGAAGTTACAGGGAGGCCTTGCTTTACCAGTATTCGAGTAATGCCAGACGGTGCTAAGTGGGATGATGACTGT AATACTTGTCAGTGTTTGAATGGAAAAGTCACCTGTTCTAAGGTTTGGTGTGGTCCTCGACCTTGTATAATACATGCCA AAGGTCATAATGAATGCCCAGCTGGACATGCTTGTGTTCCTGTTAAAGAAGACCATTGTTTCACTCATCCTTGTGCTGC AGTGGGTGAATGCTGGCCTTCTAATCAACAACCTGTGAAGACCAAATGCAATTCTGATTCTTATTACCAAGATAATTGT GCCAACATCACCTTCACCTTTAATAAGGAAATGATGGCACCAGGCCTTACCACGGAGCACATTTGCAGTGAATTGAGGA ATCTGAATATCCTGAAGAATGTTTCTGCTGAATATTCCATCTATATTACCTGTGAGCCTTCACACTTGGCAAATAATGA AATACATGTTGCTATTTCTGCTGAAGATATAGGAGAAGATGAAAACCCAATCAAGGAAATCACAGATAAGATTATTGAC CTTGTCAGTAAGCGTGATGGAAACAACACACTAATTGCTGCAGTCGCAGAAGTCAGAGTACAAAGGCGACCAGTTAAGA ACAAAACAGATTTCTTGGTGCCATTACTGAGCTCAGTCTTAACAGTAGCCTGGATCTGCTGTCTGGTAACTGTTTTCTA TTGGTGCATTCAAAAGCGCAGAAAGCAGAGCAGCCATACTCACACAGCATCTGATGACAACACCACCAACAACGTAAGG GAGCAGCTGAATCAGATTAAAAACCCCATAGAGAAACACGGAGCAAATACTGTTCCAATTAAAGACTATGAAAACAAAA ACTCTAAAATCGCCAAAATAAGGACGCACAATTCAGAAGTGGAGGAAGATGACATGGACAAACACCAGCAAAAGGCCCG GTTTGCCAAGCAGCCAGCGTACACTTTGGTAGACAGAGATGAAAAGCCACCCAACAGCACACCCACAAAACACCCAAAC TGGACAAATAAACAGGACAACAGAGACTTGGAAAGTGCACAAAGTTTAAATAGAATGGAGTACATTGTATAGCAGACAG TTGGGTGCTGCCATGCAGGGCCTTTAAATATCGTTATAAAGGCACTCAAGAGCTTGTAGTTCTTAAACTGTTGTGTAAT ATTTGAGTCTAAGGCTATTATTTACTTAGAGTCCCTCTGTTAATTTAAGTTTTGACAAGCTGGCTTACACTGGCAATGA TAGTTGCTGTGGTTGGCTGGAATACCAAGTGCTGCATTTCACATCTATGCAAAACTAGTCAAAAGTGCCCTAATGTAAA TTCAGCTGTAGCTGATACATCATGGAAACGTTTCATAAGGTATTACATAGCCTTATTACTCTTCCTTAGTGTTAATTTT TTTTTCTGCCAGATGTCCCAATTTATACAGTTTCTTTAGAATAATACATTTTATTTATATTTATTGAATCTGAGTTTTT TGTATATTGGTTTTATGGTGACGTACAACTAGTTCTGTATTTGAAAGTGCCTTTGCAGCTCGGAACCACAGCAACTATC AAAAATAAGTTTATTATTTATTTTTTTATTGTATTTTTGTTGGGGGAGGGTGGGGGGAACTTGTCAGCAGTTGCTGGTA AATGAAGAATTTAAAGAGGAAAATGTGTCAAAAATAGAAGTTTGTATAGATATGTAAATAATTCTTTTTTATTAATCAC TGTGTATATTTGATTTATTAACTTAATAATCGAGAGCCTTAAAATATCATTCCTTTTTATTTATATGTATGTGTTTAGA GTTGAAGGTTTTTGATAGCATTGTAAGCTTGTGGCTTCTTCATTTTGGATTTATTTTCTTGTTACATGTTGCCTATATG CCAAAACTAAGGTGTTCTAAAATAGTTTATTTTTAATAGGACGGGCTTTCATGCCTTGATGCTGGTTTTTGTACAATGT CAAATGTTTGAAACACCTTCCATAGTATCACTTTAAGACTATTTGTAAGTACTGACTGAGGCAGTTTAGATAATTAGAC TAGAAAATTTTTTTTGCTGCTTTAGACTTGAAACCGAGTGACAGGCAGATAATCTGCTAAGAAGCAGTTTAAGGGAACA AAACTGAGCTATTACTTTATGTAGATGAAATGTGAGTGGTTGCATGTAATTAAAATATCAAATTAGCGTGTGAAGTTGG AAACACAGCAATCTTATTTTGTAAATTCTGATTATTTTTTTTCTCACCATGAATATGTAATACTGAACCACTTGTAGAT TTGAATTTTTTTGTAATCTACTGCATTTAGGGAGTATTCTAATAAGCTAGTTGTTGAATACTTGAACAGTAGAATGTCC AGTAAGATCACTGTGTAGGTTTGCCATAGATTACACTGCCCGCCTTAACAAGTGAGGAAATCAAAGTGCTATTACAATG TTTAAGATCAAAAGGCTTATAAACATACTAATCTCGGTGGTTAACCATTGAGATCATGAAGATACCTTGTATTGTGATA TTAGTGTTATATGAAAATGCATCTTTGATGTGTTGTTCCTGGCAATAAATCTTGAAAAGTAATATTTATTAAATTTTTT TGTATGAAAACATAAAAGAGCGTGGAGATTATTGAGCTTGGAACCACTCCCAACTGGTTAGTTGTGCTAAAACAGTGGC AGGTGATGGCTTACATTTCTAAGACCTGACACTGATTTTGGTGAAGTCTAGTTTTTGTTAGATGATTACATGTTTGTCT AGCTTTCATTCAAATTGAAGGGGTTCAAAAGCAACCTGGCCCTTGTTCTTGATGTCTTTTGGCTAATGTAACTCTGTGT CCTTTTGAAAAGAGAATGATAATGTGACTGGAATTGTGCAACTAGTTTACTTTGCATGGGCCAATGAGCTACCACCAGA TGGTAACCAAATCTAAGTAGCTAGGCAAGATACAAACTGCTGACCTGGATGGGAAAGGAGCCACAGATTATACTGATGC CTGATGGGCAAAAAAATGCTTCATAAAGCATAAAATAAACTCTTAGAATATT
Citation	Daudet N, Ariza-McNaughton L, Lewis J. Notch signalling is needed to maintain, but not to initiate, the formation of prosensory patches in the chick inner ear. Development. 2007 Jun;134(12):2369-78.
Copyright	Copyright 2007 the authors. Published by the Company of Biologists Ltd.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_415035.3).

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 10

Neural Plate/Tube
Surface Ectoderm

13-18

stage 13

stage 17

stage 18

Ear/Otic Placode
Neural Plate/Tube

Entry 6

GEISHA Id	C-Serrate-1.Hayashi.1996	Data Source	Publication
Complete cDNA Template Probe	show TTTAAAGTTTGCCTGAAGGAGTACCAGTCGCGGGTCACTGCTGGCGGCCCTTGCAGCTTCGGATCCAAATCCACCCCTG TCATCGGCGGGAATACCTTCAATTTAAAGTACAGCCGGAATAATGAAAAGAACCGGATTGTTATCCCTTTCAGCTTCGC CTGGCCGAGATCCTACACGTTGCTTGTTGAGGCATGGGATTACAATGATAACTCTACTAATCCCGATCGCATAATTGAG AAGGCATCCCACTCTGGCATGATCAATCCAAGCCGTCAGTGGCAGACGTTGAAACATAACACAGGAGCTGCCCACTTTG AGTATCAAATCCGTGTGACTTGCGCAGAACATTACTATGGCTTTGGATGCAACAAGTTTTGTCGACCGAGAGATGACTT CTTCACTCACCATACCTGTGACCAGAATGGCAACAAAACCTGCTTGGAAGGCTGGACGGGACCAGAATGCAACAAAGCT ATTTGTCGTCAGGGATGTAGCCCCAAGCATGGTTCTTGCACAGTTCCAGGAGAGTGCAGGTGTCAGTATGGATGGCAAG GCCAGTACTGTGATAAGTGCATTCCACACCCGGGATGTGTCCATGGCACTTGCATTGAACCATGGCAGTGCCTCTGTGA AACCAACTGGGGTGGTCAGCTCTGTGACAAAGACCTGAACTACTGTGGAACCC
Citation	Hayashi H, Mochii M, Kodama R, Hamada Y, Mizuno N, Eguchi G, Tachi C. Isolation of a novel chick homolog of Serrate and its coexpression with C-Notch-1 in chick development. Int J Dev Biol. 1996 Dec;40(6):1089-96.
Copyright	© UBC Press
Comments	The complete cDNA template sequence was obtained from the information in the publication as described in Hayashi et al. 1996. C-Serrate-1 is also known as JAG1 in NCBI.

Stage

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Location (click to highlight)

Comments (click to highlight)

stage 25

Diencephalon
Limb Buds

Entry 7

GEISHA Id	JAG1.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show AGACGGGCGGCGGGCGGTGCGTGCGCTGCATGTGCGTGTGTGTATGTGTGTATGTGTGCGTGGTGTGTGTGCGTGTGTG TCCCGGGGGGCGCCTCCGCCGCGCGCTGCCCGGCGACCTGAAAGCAATAAAAGGATCGGGATAATAATCGCGATAATAA AATAAAAGAGAAAAGAAAAGGCGGACGACAAAAAGAAAGGAGAAAAAAAAAAAAAAAGAAAGAGGGAGGCGAGAGAATA AGGAGAATAAAAGGAGGCCGGGCTGCTTTGCATTGAAGACCGGGGCGCTATTGAAAGCGCCTGAAAAGCGGCGTTGTTC GGCGCGGGCGCGGCGCGGTATATAGAGCGGGGCGGCGGCAGCGGCGGCGGCAGCGGCGTCTCCTCCTCCTTCTCCCTCC GGCCCTCCCCGGCGCGTCCCGGAGCGAGCGGCGGCGGCGGCCTGCAGGCGGGCAGCGCGGCGGCGGCATGCGTGCGGCC CGGCGGGCGGCGGCGCGCTCCCTCGTCCTCTTCCTGGCCCTGCTGGGGCTGCGGGCTCAGGTGGCGTCAGCATCGGGAC AGTTCGAGCTGGAGATCTTATCCGTGCAGAATGTGAACGGCGTGCTGCAGAACGGGAACTGCTGCGACGGCACTCGAAA CCCCGGAGATAAAAAGTGCACCAGAGATGAGTGTGACACCTACTTTAAAGTTTGCCTGAAGGAGTACCAGTCGCGGGTC ACTGCTGGCGGCCCTTGCAGCTTCGGATCCAAATCCACCCCTGTCATCGGCGGGAATACCTTCAATTTAAAGTACAGCC GGAATAATGAAAAGAACCGGATTGTTATCCCTTTCAGCTTCGCCTGGCCGAGATCCTACACGTTGCTTGTTGAGGCATG GGATTACAATGATAACTCTACTAATCCCGATCGCATAATTGAGAAGGCATCCCACTCTGGCATGATCAATCCAAGCCGT CAGTGGCAGACGTTGAAACATAACACAGGAGCTGCCCACTTTGAGTATCAAATCCGTGTGACTTGCGCAGAACATTACT ATGGCTTTGGATGCAACAAGTTTTGTCGACCGAGAGATGACTTCTTCACTCACCATACCTGTGACCAGAATGGCAACAA AACCTGCTTGGAAGGCTGGACGGGACCAGAATGCAACAAAGCTATTTGTCGTCAGGGATGTAGCCCCAAGCATGGTTCT TGCACAGTTCCAGGAGAGTGCAGGTGTCAGTATGGATGGCAAGGCCAGTACTGTGATAAGTGCATTCCACACCCGGGAT GTGTCCATGGCACTTGCATTGAACCATGGCAGTGCCTCTGTGAAACCAACTGGGGTGGTCAGCTCTGTGACAAAGACCT GAACTACTGTGGAACCCACCCACCCTGTTTGAATGGTGGTACCTGCAGCAACACTGGCCCCGATAAATACCAGTGTTCC TGCCCTGAGGGTTACTCAGGACAGAACTGTGAAATAGCGGAGCACGCGTGCCTCTCTGATCCGTGCCACAACGGAGGAA GCTGCCTAGAAACGTCTACAGGATTTGAATGTGTGTGTGCACCTGGCTGGGCTGGACCAACTTGCACTGATAATATTGA TGATTGTTCTCCAAATCCCTGTGGTCATGGAGGAACTTGCCAAGATCTAGTTGATGGATTTAAGTGTATTTGCCCACCT CAGTGGACTGGCAAAACATGCCAGCTAGATGCGAATGAATGTGAGGGCAAACCCTGTGTCAATGCCAACTCCTGCAGGA ACCTGATTGGCAGCTACTATTGTGACTGCATTACTGGCTGGTCTGGCCACAACTGTGATATAAATATCAATGATTGTCG TGGACAATGTCAGAATGGAGGATCCTGTCGGGACTTGGTTAATGGTTATCGGTGCATCTGTTCACCTGGCTATGCAGGA GATCACTGTGAGAAAGACATCAATGAATGTGCAAGTAACCCTTGCATGAATGGGGGTCACTGCCAGGATGAAATCAATG GATTCCAATGTCTGTGTCCTGCTGGTTTCTCAGGAAACCTCTGTCAGCTGGATATAGACTACTGTGAGCCAAACCCTTG CCAGAACGGTGCCCAGTGCTTCAATCTTGCTATGGACTATTTCTGTAACTGCCCTGAAGATTACGAAGGCAAGAACTGC TCCCACCTGAAAGATCACTGCCGCACAACTCCTTGTGAAGTAATCGACAGCTGTACAGTGGCAGTGGCTTCTAACAGCA CACCAGAAGGAGTTCGTTACATTTCTTCAAATGTCTGTGGTCCTCATGGAAAATGCAAGAGCCAAGCAGGTGGAAAATT CACCTGTGAATGCAACAAAGGATTCACTGGCACCTACTGTCATGAGAATATCAATGACTGTGAGAGCAACCCCTGTAAA AATGGTGGCACTTGTATTGATGGTGTAAACTCCTACAAATGTATTTGTAGTGATGGATGGGAAGGAACATATTGTGAAA CAAATATTAATGACTGCAGTAAAAACCCCTGCCACAATGGAGGAACTTGCCGAGACTTGGTCAATGACTTCTTCTGTGA ATGTAAAAATGGGTGGAAAGGAAAAACTTGCCACTCTCGTGACAGCCAGTGTGATGAGGCAACATGCAATAATGGAGGA ACATGTTATGATGAGGGGGACACTTTCAAGTGCATGTGTCCTGCAGGATGGGAAGGAGCCACTTGTAATATAGCAAGGA ACAGCAGCTGCCTGCCAAACCCCTGTCACAATGGTGGTACCTGTGTAGTTAGTGGGGATTCTTTCACTTGTGTCTGCAA GGAGGGCTGGGAAGGACCGACATGTACTCAGAACACAAATGACTGCAGTCCTCATCCTTGTTACAACAGTGGTACTTGT GTGGATGGAGACAACTGGTACCGCTGTGAGTGCGCTCCAGGCTTCGCAGGTCCCGACTGTAGGATCAACATCAATGAAT GTCAGTCTTCACCCTGTGCCTTTGGGGCTACTTGTGTGGATGAAATTAATGGGTACCGTTGCATTTGTCCACCGGGTCG CAGTGGTCCAGGATGCCAGGAAGTTACAGGGAGGCCTTGCTTTACCAGTATTCGAGTAATGCCAGACGGTGCTAAGTGG GATGATGACTGTAATACTTGTCAGTGTTTGAATGGAAAAGTCACCTGTTCTAAGGTTTGGTGTGGTCCTCGACCTTGTA TAATACATGCCAAAGGTCATAATGAATGCCCAGCTGGACACGCTTGTGTTCCTGTTAAAGAAGACCATTGTTTCACTCA TCCTTGTGCTGCAGTGGGTGAATGCTGGCCTTCTAATCAGCAGCCTGTGAAGACCAAATGCAATTCTGATTCTTATTAC CAAGATAATTGTGCCAACATCACCTTCACCTTTAATAAGGAAATGATGGCACCAGGCCTTACCACGGAGCACATTTGCA GTGAATTGAGGAATCTGAATATCCTGAAGAATGTTTCTGCTGAATATTCCATCTATATTACCTGTGAGCCTTCACACTT GGCAAATAATGAAATACATGTTGCTATTTCTGCTGAAGATATAGGAGAAGATGAAAACCCAATCAAGGAAATCACAGAT AAGATTATTGACCTTGTCAGTAAGCGTGATGGAAACAACACACTAATTGCTGCAGTCGCGGAAGTCAGAGTACAAAGGC GACCAGTTAAGAACAAAACAGATTTCTTGGTGCCATTACTGAGCTCAGTCTTAACAGTAGCCTGGATCTGCTGTCTGGT AACTGTTTTCTATTGGTGCATTCAAAAGCGCAGAAAGCAGAGCAGCCATACTCACACAGCATCTGATGACAACACCACC AACAACGTAAGGGAGCAGCTGAATCAGATTAAAAACCCCATAGAGAAACACGGAGCAAATACTGTTCCAATTAAAGACT ATGAAAACAAAAACTCTAAAATCGCCAAAATAAGGACGCACAATTCAGAAGTGGAGGAAGATGACATGGACAAACACCA GCAAAAGGCCCGGTTTGCCAAGCAGCCAGCGTACACTTTGGTAGACAGAGATGAAAAGCCACCCAACAGCACACCCACA AAACACCCAAACTGGACAAATAAACAGGACAACAGAGACTTGGAAAGTGCACAAAGTTTAAATAGAATGGAGTACATTG TATAGCAGACAGTTGGGTGCTGCCATGCAGGGCCTTTAAATATCATTATAAAGGCACTCAAGAGCTTGTAGTTCTTAAA CTGTTGTGTAATATTTGAGTCTAAGGCTATTATTTACTTAGAGTCCCTCTGTTAATTTAAGTTTTGACAAGCTGGCTTA CACTGGCAATGATAGTTGCTGTGGTTGGCTGGAATACCAAGTGCTGCATTTCACATCTATGCAAAACTAGTCAAAAGTG CCCTAATGTAAATTCAGCTGTAGCTGATACATCATGGAAACGTTTCATAAGGTATTACATAGCCTTATTACTCTTCCTT AGTGTTAATTTTTTTTCTGCCAGATGTCCCAATTTATACAGTTTCTTTAGAATAATACATTTTATTTATATTTATTGAA TCTGAGTTTTTTTGTATATTGGTTTTATGGTGACGTACAACTAGTTCTGTATTTGAAAGTGCCTTTGCAGCTCGGAACC ACAGCAACTATCAAAAATAAGTTTATTATTTATTTTTTTATTGTATTTTTGTTGGGGGAGGGTGGGGGGAACTTGTCAG CAGTTGCTGGTAAATGAAGAATTTAAAGAGGAAAATGTGTCAAAAATAGAAGTTTGTATAGATATGTAAATAATTCTTT TTTATTAATCACTGTGTATATTTGATTTATTAACTTAATAATCGAGAGCCTTAAAATATCATTCCTTTTTATTTATATG TATGTGTTTAGAGTTGAAGGTTTTTGATAGCATTGTAAGCTTGTGGCTTCTTCATTTTGGATTTATTTTCTTGTTACAT GTTGCCTATATGCCAAAACTAAGGTGTTCTAAAATAGTTTATTTTTAATAGGACGGGCTTTCATGCCTTGATGCTGGTT TTTGTACAATGTCAAATGTTTGAAACACCTTCCATAGTATCACTTTAAGACTATTTGTAAGTACTGACTGAGGCAGTTT AGATAATTAGACTAGAAAATTTTTTTTTGCTGCTTTAGACTTGAAACCGAGTGACAGGCAGATAATCTGCTAAGAAGCA GTTTAAGGGAACAAAACTGAGCTATTACTTTATGTAGATGAAATGTGAGTGGTTGCATGTAATTAAAATATCAAATTAG CGTGTGAAGTTGGAAACACAGCAATCTTATTTTGTAAATTCTGATTATTTTTTTTCTCACCATGAATATGTAATACTGA ACCACTTGTAGATTTGAATTTTTTTGTAATCTACTGCATTTAGGGAGTATTCTAATAAGCTAGTTGTTGAATACTTGAA CAGTAGAATGTCCAGTAAGATCACTGTGTAGGTTTGCCATAGATTACACTGCCCGCCTTAACAAGTGAGGAAATCAAAG TGCTATTACAATGTTTAAGATCAAAAGGCTTATAAACATACTAATCTCGGTGGTTAACCATTGAGATCATGAAGATACC TTGTATTGTGATATTAGTGTTATATGAAAATGCATCTTTGATGTGTTGTTCCTGGCAATAAATCTTGAAAAGTAATATT TATTAAATTTTTTTGTATGAAAACATAAAA
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_040668033 ).