GEISHA - A Chicken Embryo Gene Expression Database
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PTPRA
protein tyrosine phosphatase, receptor type A

Gene
Official SymbolPTPRA
Official Full Nameprotein tyrosine phosphatase, receptor type A
CGNC ID49633
also known asPTPA, receptor-type tyrosine-protein phosphatase alpha|protein tyrosine phosphatase receptor type alpha|protein-tyrosine-phosphatase alpha
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_205154
PolypeptideNP_990485
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5786ENSG00000132670MIM:176884
Mouse19262ENSMUSG00000027303All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:97808
Xenopus100158513, 3943581012346
Zebrafish140818ENSDARG00000001769ZDB-GENE-020107-1ZFIN:ZDB-GENE-020107-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene396060
Ensembl GeneENSGALG00000015995
KEGGgga:396060
GEISHA IdRPTPalpha.Chilton.2000Data SourcePublication
Complete cDNA Template Probeshow
CAGCCCCGCGGCGGGGTGCTGAGAGGCGGCGGTGGACAGCGCCGGGCCCCCCCCCAACCCCCGCGGCCGCGTCCATTCC
CTCCGTCCATGCTCCCGGCCGTCGCGGCCTCGCAGCGGAGCCGTTGGGCGGCGGCGAGAGAGGCGGGGAGAGAGGGAGA
GAGCAGCGGGCCCGGCCCCGCGCCCGCAGGGGCACCACTGGAAGAACCTTTATGGGCTCCTAATGACATGCAGGTGGAC
GATTTGCTTAGGAAAATTAAGGTCAACATGGATCTATGGTTCTTTGTCCTTTTGCTTGGAAGTGGCCTGATCAGCGTCG
GTGCTACCAATGTCACAACAGAGCCACCAACGACAGTGCCCACCTCCACCAGGATCCCCACCAAAGCTCCTACAGCAGC
TCCTGATGGTGGGACAACGCCGAGAGTGAGCAGCCTCAACGTTAGCTCTCCGATGACCACTTCTGCCCCGGCGTCGGAG
CCACCTACAACCACAGCCACCAGCATCTCCCCCAATGCCACCACTGCCAGCCTCAATGCCTCCACTCCAGGGACATCAG
TGCCCACGTCCGCCCCTGTGGCCATCTCGCTGCCACCCAGCGCGACACCGTCTGCCCTGCTTACTGCACTGCCCAGCAC
AGAAGCAGAGATGACCGAAAGGAACGTCAGCGCGACGGTGACGACGCAAGAGACCTCTTCTGCATCCCACAATGGTAAC
TCTGACAGAAGAGATGAGACTCCAATTATCGCCGTGATGGTGGCCCTGTCCTCCCTCCTAGTCATAGTATTTATTATTA
TTGTGCTGTACATGTTAAGGTTCAAGAAATACAAGCAAGCAGGGAGTCACTCCAACTCCTTCCGCCTGCCCAATGGCCG
GACAGATGATGCAGAGCCCCAGAGCATGCCGCTGCTCGCCAGGTCCCCCAGCACCAACAGGAAATACCCACCTCTGCCT
GTCGACAAGCTGGAGGAGGAGATCAACCGCCGCATGGCAGATGACAACAAGCTCTTCCGAGAAGAGTTCAACGCTCTCC
CAGCGTGTCCCATTCAGGCCACATGTGAAGCTGCTTCCAAGGAGGAGAACAAGGAGAAGAACCGCTACGTGAACATTTT
GCCCTATGATCATTCCAGGGTTCACCTGACTCCTGTTGAAGGGGTTCCTGACTCTGACTACATTAACGCCTCCTTCATT
AATGGGTACCAAGAGAAAAACAAGTTCATTGCTGCACAAGGACCAAAAGAAGAAACAGTGAATGACTTTTGGAGAATGA
TTTGGGAGCAAAACACAGCAACGATTGTCATGGTGACCAACCTGAAGGAGAGGAAAGAGTGTAAGTGTGCTCAGTACTG
GCCAGATCAGGGCTGCTGGACATATGGGAACATCCGCGTTTCGGTGGAAGACGTGACAGTGCTGGTGGACTACACCGTG
CGCAAGTTCTGCATTCAGCAGGTAGGTGACGTCACGAACAAGAAGCCTCAGCGCCTGGTGACTCAGTTCCACTTCACCA
GCTGGCCCGACTTCGGGGTGCCCTTCACCCCCATTGGGATGCTGAAGTTCTTAAAGAAGGTGAAGACGTGTAACCCCCA
GTATGCAGGAGCAATAGTAGTGCACTGCAGTGCTGGGGTGGGACGCACAGGCACTTTTATTGTCATCGACGCCATGCTG
GACATGATGCATGCCGAGAGGAAGGTGGATGTTTACGGCTTTGTGAGCCGGATCCGGGCTCAGCGCTGCCAGATGGTAC
AGACAGATATGCAGTATGTGTTCATATACCAAGCACTGCTGGAGCACTATCTCTATGGTGATACAGAGCTAGAGGTGAC
CTCATTAGAAATCCACCTCCAGAAGATCTACAACAAAGTGCCAGGGACCAGCAGCAATGGGCTGGAAGAGGAGTTCAAG
AAGCTCACTTCCATCAAAATTCAGAACGACAAGATGAGAACAGGCAACTTGCCAGCAAACATGAAAAAGAACAGGGTGC
TTCAGATAATTCCATATGAGTTCAACAGAGTAATCATTCCAGTGAAGAGAGGTGAAGAAAACACAGACTACGTTAATGC
TTCCTTTATTGATGGCTATCGCCAGAAGGACTCCTACATTGCCAGCCAAGGGCCACTGCAGCACACGATAGAGGACTTC
TGGAGGATGATCTGGGAGTGGAAATCCTGCTCCATAGTCATGTTAACAGAGCTGGAGGAGAGAGGCCAGGAGAAATGTG
CCCAGTACTGGCCTTCTGATGGCTCTGTGTCCTATGGAGACATCAACGTGGAGCTTAAAAAAGAGGAGGAATGCGAGAG
CTACACAGTGCGGGACCTGCTGGTGACAAACACCAGGGAAAACAAGAGCCGACAGATCCGACAGTTCCACTTCCATGGC
TGGCCAGAGGTTGGGATCCCCAGCGATGGGAAGGGAATGATCAACATCATTGCGGCCGTGCAGAAGCAGCAGCAGCAGT
CAGGCAACCACCCCATCACTGTGCACTGCAGTGCCGGAGCAGGAAGAACAGGAACCTTCTGTGCACTGAGCACTGTCCT
GGAAAGGGTGAAAGCAGAGGGGATTCTCGATGTCTTTCAGACAGTGAAGAGTTTAAGACTACAGAGGCCGCATATGGTG
CAGACACTGGAACAGTACGAATTCTGCTACAAAGTGGTGCAGGAATACATCGACGCCTTCTCAGACTACGCCAACTTCA
AGTGAAAAATACAGCAAAACAAACAAACCTGAAACAAACGACAGAAGAGTTGCCTTCTTTAATATTTTGTAATATTCTG
TTTGTTAATATACCCCTCCCCCAGAATATGTGTATATATCTTAACTGTTTTAGAGGTTGGTACCATAAGCTTCATATTA
GCTGGAGATTTTATATGTAGCAAAGTGTTAGTGCAGATACTGTCAGCTCCTTTTTTTTCCAATGTTTTATTGGGGAATT
AAATAGCGTGATGTTTGGATTAATATTGTCATACCATCTCTCTTCTGGAGAGTTGATACAGGCTGTTATTTTGTTTGTA
AATCTTTCTTTTTTTTTTTTTTTTTTTCTTGAGGGAGTAAAGCCTTTTTTTTAAAAAAAAAAAAAAAAAAAGAAAAAGA
AAAGAATAATTCTGGATCTCATCTGAACCAATAACCCAAAAGCAAGCACAAGCTTTTCCAAACCTGCAGGGAAATGGTT
TCACATTTTTCTGCCAGTCAGCTCTTTAAAATACGGAGAAAAGAAACCAAACCAACTTA
CitationChilton JK, Stoker AW. Expression of receptor protein tyrosine phosphatases in embryonic chick spinal cord. Mol Cell Neuros. 2000 Oct;16(4):470-80
CopyrightCopyright © 2000 by Academic Press 470 All rights of reproduction in any form reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_205154.2).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Spinal Cord
ventral horn and floorplate
25-30
stage 26
Spinal Cord
LMC: Lateral motor column
Ventral midline
31-36
stage 34
stage 36
Spinal Cord
LMC: Lateral medial column
LMC: Lateral motor column
ventral midline

Mouse

EmageMGI:97808
MGI GXDMGI:97808

Frog

Xenbase1012346

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-020107-1
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