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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
	Multiple Parameters

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EPHB3
EPH receptor B3

Gene

Official Symbol	EPHB3
Official Full Name	EPH receptor B3
CGNC ID	49688
also known as	CEK10, EK10, ephrin type-B receptor 3\|EPH-like kinase 10, Ephrin type-B receptor 3, Tyrosine-protein kinase receptor CEK10
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_422762
Polypeptide	XP_422762
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.3053

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	2049	ENSG00000182580		MIM:601839
Mouse	13845	ENSMUSG00000005958	All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2)	MGI:104770
Xenopus	100489199, 734241			488643
Zebrafish	555957, 30313	ENSDARG00000033589, ENSDARG00000031548	ZDB-GENE-100811-1, ZDB-GENE-990415-60	ZFIN:ZDB-GENE-100811-1, ZFIN:ZDB-GENE-990415-60

Gene Ontology

Molecular Function	ATP binding, ephrin receptor activity
Biological Process	axonal fasciculation, axon guidance, cell migration, dendritic spine development, more...
Cellular Component	dendrite, integral component of plasma membrane

Links to other databases

Entrez Gene	396179
Ensembl Gene	ENSGALG00000008537
KEGG	gga:396179

Entry 1

GEISHA Id	EPHB3.Alev.2010	Data Source	Publication
Complete cDNA Template Probe	show CGTGTCTACGTGGAGCTGAAATTCACTGTGCGGGACTGCAACAGCATCCCCAACATCCCTGGTTCCTGCAAAGAGACCT TCAACCTCTTCTATTATGAGTCAGATACGGATTCTGCCTCTGCCAATAGCCCTTTCTGGATGGAGAACCCCTATATCAA AGTGGATACAATTGCTCCGGATGAGAGCTTCTCCAAACTGGAGTCCGGCCGTGTGAACACCAAGGTGCGCAGCTTTGGG CCGCTCTCCAAGAATGGCTTTTATCTGGCTTTCCAGGACCTGGGGGCCTGCATGTCCCTTATCTCCGTCCGGGCTTTCT ACAAGAAATGTTCCAACACCATCGCTGGCTTTGCTATCTTCCCGGAGACCCTAACGGGGGCTGAGCCCACGTCGCTGGT CATTGCGCCGGGCACCTGCATCCCCAACGCAGTGGAAGTGTCTGTGCCCCTGAAGCTGTACTGCAACGGTGATGGCGAG TGGATGGTGCCTGTGGGAGCGTGCACGTGTGCTGCTGGGTACGAGCCAGCCATGAAGGATACCCAGTGC
Citation	Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28.
Copyright	Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng.
Comments	The probe for EPHB3 was amplified by PCR using the following primers: forward (5' to 3'): CGTGTCTACGTGGAGCTGAA reverse (3' to 5'): GCACTGGGTATCCTTCATGG

Stage

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1-3

stage 1

stage 4

Primitive Streak

Entry 2

GEISHA Id	EPHB3.Santiago.2002	Data Source	Publication
Complete cDNA Template Probe	show CGGCGCCAGAGCGCGAGCGTGGCGCGGCGGCGAGAGGAGCTGCGCGTGGCGCCGAGCTCGGGACTGCCCGGCGGGGCCG CCCGCACCGCCCCCCGCCATGGCCGCGGCCCGCCCGGGGGCCGCCCCGCCGCCGCCGCCGCTGCTCCCCCTCCTGCTGC TCCTGCTGCTGCCCGGCGGCCGCCGCGCCCTCGAGGAGACCCTGATGGACACGAAGTGGGTGACCTCGGAGCTGGCATG GACAACCCATCCGGAGACGGGGTGGGAAGAGGTCAGTGGTTACGACGAGGCTATGAACCCCATCCGCACATACCAGGTG TGCAACGTGCGGGAGGCCAACCAGAACAACTGGCTTCGCACCAAGTTCATTCAGCGCCAGGACGTCCAGCGTGTCTACG TGGAGCTGAAATTCACTGTGCGGGACTGCAACAGCATCCCCAACATCCCTGGTTCCTGCAAAGAGACCTTCAACCTCTT CTATTATGAGTCAGATACGGATTCTGCCTCTGCCAATAGCCCTTTCTGGATGGAGAACCCCTATATCAAAGTGGATACA ATTGCTCCGGATGAGAGCTTCTCCAAACTGGAGTCCGGCCGTGTGAACACCAAGGTGCGCAGCTTTGGGCCGCTCTCCA AGAATGGCTTTTATCTGGCTTTCCAGGACCTGGGGGCCTGCATGTCCCTTATCTCCGTCCGGGCTTTCTACAAGAAATG TTCCAACACCATCGCTGGCTTTGCTATCTTCCCGGAGACCCTAACGGGGGCTGAGCCCACGTCGCTGGTCATTGCGCCG GGCACCTGCATCCCCAACGCAGTGGAAGTGTCTGTGCCCCTGAAGCTGTACTGCAACGGTGATGGCGAGTGGATGGTGC CTGTGGGAGCGTGCACGTGTGCTGCTGGGTACGAGCCAGCCATGAAGGATACCCAGTGCCAAGCATGCGGCCCGGGGAC GTTCAAATCCAAGCAGGGCGAGGGCCCCTGCTCCCCCTGCCCTCCCAACAGCCGCACCACCGCGGGGGCAGCCACAGTC TGCATATGTCGCAGCGGCTTCTTCCGAGCAGACGCGGACCCCGCAGACAGCGCCTGCACCAGTGTGCCCTCAGCCCCAC GCAGCGTCATCTCCAACGTGAATGAGACGTCGTTGGTGCTGGAGTGGAGCGAGCCGCAGGACGCGGGCGGGCGGGATGA CCTGCTCTACAACGTCATCTGCAAGAAGTGCAGCGTGGAGCGGCGGCTGTGCACGCGCTGCGACGACAACGTGGAGTTC GTGCCGCGCCAGCTGGGCCTCACTGAGCGACGCATCTACATCAGCAACCTGATGGCCCACACCCAGTACACCTTCGAGA TCCAGGCGGTGAATGGCATCTCCAGCAAGAGCCCCTACCCTCCCCATTTTGCCTCCGTCAACATCACGACCAACCAGGC AGCCCCATCTGCCGTGCCCACCATGCATCTGCACAGCAGCACCGGGAACAGCATGACACTGTCATGGACTCCCCCGGAA AGGCCCAACGGCATCATTCTCGACTATGAAATCAAGTACTCCGAGAAGCAAGGCCAGGGTGACGGCATTGCCAACACTG TCACCAGCCAGAAGAACTCGGTGCGGCTGGATGGACTGAAGGCCAATGCTCGGTACATGGTGCAGGTCCGGGCGCGCAC AGTGGCTGGATACGGCCGCTACAGCCTCCCCACCGAGTTCCAGACGACTGCGGAGGATGGCTCCACCGGCAAGACTTTC CAGGAGCTTCCTCTCATCGTGGGTTCAGCCACCGCGGGACTGCTGTTTGTCATCGTGGTGGTCATCATCGCTATTGTCT GCTTCAGGAAAGGGATGGTTACTGAACAACTCCTCTCGTCTCCTTTGGGCAGGAAGCAGCGCAACAGCACAGATCCCGA GTACACAGAGAAGCTGCAGCAATATGTCACTCCTGGGATGAAGGTCTACATTGACCCCTTCACCTATGAAGACCCGAAT GAAGCTGTCCGGGAATTCGCCAAAGAGATTGATATCTCCTGTGTCAAAATTGAGGAGGTCATTGGAGCAGGAGAATTTG GTGAGGTGTGCCGTGGGCGCCTGAAGCTGCCTGGCCGCCGTGAGATCTTTGTGGCCATCAAGACACTGAAGGTGGGCTA CACAGAGAGGCAGCGGCGGGACTTCCTGAGTGAGGCCAGCATCATGGGCCAGTTCGACCACCCCAACATCATCCACCTG GAGGGCGTGGTGACCAAGAGCCGCCCCGTCATGATCATCACAGAGTTCATGGAGAACTGCGCTCTCGACTCCTTCCTCC GGCTGAATGATGGGCAGTTCACGGTCATCCAGCTGGTGGGGATGCTGCGAGGCATCGCTGCTGGCATGAAGTACCTCTC AGAGATGAACTACGTGCACCGAGACCTGGCTGCCCGCAACATCCTGGTCAACAGCAACTTGGTCTGCAAAGTGTCTGAC TTCGGGCTCTCCCGCTTTTTGGAGGATGATCCAGCCGACCCCACCTACACCAGCTCCCTGGGAGGCAAGATCCCCATCA GGTGGACAGCTCCTGAGGCCATCGCCTACCGCAAATTCACGTCGGCCAGCGACGTGTGGAGCTACGGCATCGTCATGTG GGAAGTGATGTCCTACGGGGAGCGACCCTACTGGGACATGTCCAACCAGGATGTGATCAACGCGGTGGAGCAGGATTAC CGCCTGCCACCCCCCATGGACTGCCCCACAGCACTGCACCAGCTGATGCTGGACTGCTGGGTGCGGGACCGCAACCTGC GGCCCAAGTTTGCACAGATTGTCAACACGCTGGACAAGCTGATCCGCAATGCTGCCAGCCTGAAGGTCATCGCCAGCGT CCAGTCCGGTGTCTCCCAGCCGCTCCTGGACCGCACCGTGCCCGATTACACCACCTTCACCACCGTGGGAGACTGGCTG GATGCCATCAAAATGGGACGGTACAAGGAGAACTTCGTCAACGCCGGCTTCGCCTCCTTTGACCTGGTGGCACAGATGA CAGCAGAGGACCTGCTGAGGATAGGAGTGACGCTAGCAGGGCACCAGAAGAAGATCCTGAGCAGCATTCAGGACATGAG GCTGCAGATGAACCAGACGCTGCCGGTTCAGGTTTGACCGCAGGGGACTCTGCATTGGAACGGACTGAGGGAACCTGCC AACCAGGTTCTGTTTGCGGTGCAGCCCGGCTTCCCGATTTCCCCTTCCCGTGGCGCTCCTCTGCCTCGGACGCTCGCCG GGGACAGGCTGGGCCGGGCCACCCTTCCCTGGATCAGAGGCACTCGTGCCGAGAGGGAGCCCGGCTTTTCGTCCCGTGT CCCGCAGCGGCGAGGCAGTGAACGCAGTCTTCATATTGAAGATGGATTATGGGACGGAGATGGCGCATCCGCTTCCCGC CCTGTCTCAGTGCTCATCAGTTTGAAGAGATGTTCTGCTTCTTGGATTTCTTTACACCCCGGTTTTCCCCCCTCGAGTC CTCACTTCCCCCTATCCCTGAGGCCACAGACTGTTGACCCGTCCGCTGAGTCCGTCAGACGCTCCGAAGCCTTCCCCGA GCCCGGTCCCCGCGTGGAGACGGCGCCAGGGACGGGGCTACGGCCCCAGACAATCACTCCACCCCTCCGCACGAGGGTC CTCACTGGGACGTGTCTGAAGGGGAAAGGCTCTGCTCCCTTTTTGGCTTTGCACGCCAGAACCCGAACCCCGTGAGATT TACTATGCAGGGAGTTAGGCAAAAAAAAATAATAATAATAATAGAGAGAGATATATTAAAAAAAAAAAAAGAGGGTGCA GAAAGGGGACCCTCTTGGTTCTCGTGGCCGGCTCTGGACTGCAGAGTGAGGCCGTCAGCACGTTTGCACAGGGACCCTC CAGCCCCCAAAGCGGGGCCAGGAGCGGGGCCGGGGCCACACGGAGGCCTGGCCTCCCCCAGCCTCCTGTTTTATGCAGA AGGAGCGGGTGCCGCTCCTGCCACACGCTGTGATTGCTGCCAAAAGACTCACTCACCTTCCTCTGACTTCACTGCAGCC CGCTTCCTCCGTGCTGAGGGCGAGACTCCCAGCGTGCATGAGTGTGTGTGAGTGTGTGCGTGCGTGCGTGAGTGCTGGC CGGCAGGACTGTGCGAGGCAATGGGCAGAATAAAGGCAATAAGAATTTTA
Citation	Santiago A, Ericsson CA. Ephrin-B ligands play a dual role in the control of neural crest cell migration. 2002 Aug;129(15):3621-32
Copyright	Great Britain © The Company of Biologists Limited 2002
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # XM_015291527.2).