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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
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ITGA6
integrin subunit alpha 6

The human orthologue of this gene is associated
with the following human disease:

Epidermolysis bullosa, junctional, with pyloric stenosis

Gene

Official Symbol	ITGA6
Official Full Name	integrin subunit alpha 6
CGNC ID	7117
also known as	integrin alpha-6\|VLA-6\|integrin alpha 6 subunit\|integrin, alpha 6
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_205289
Polypeptide	NP_990620
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.44589

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	3655	ENSG00000091409	MIM:226730	MIM:147556
Mouse	16403		All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(2) Gene trapped(1)	MGI:96605
Xenopus	100497992, 397985			489981
Zebrafish	503893, 541320	ENSDARG00000042282, ENSDARG00000069946	ZDB-GENE-050309-23, ZDB-GENE-050320-5	ZFIN:ZDB-GENE-050309-23, ZFIN:ZDB-GENE-050320-5

Gene Ontology

Molecular Function	metal ion binding
Biological Process	cell adhesion, integrin-mediated signaling pathway
Cellular Component	integrin complex

Links to other databases

Entrez Gene	396226
Ensembl Gene	ENSGALG00000009362
KEGG	gga:396226

GEISHA Id	INTEGRINA6.Kee.2007	Data Source	Publication
Complete cDNA Template Probe	show CTCGGCGGCAGGTTCTCGTGCCGGCTGGAGCAGATGGCGGCCGCGCTCCTCCTCTACCTGCCCCTGCTGCCGGGGCTGG CCGGCGCCTTCAACCTGGACGCGGAGAACGTGATCGGCCGGCGCGGGGAGCCGGGCAGCCTCTTCGGCTTCTCGCTGGC CATGCACCGGCAGCTGCAGCCGCAGGAGAAACGGCTGTTGCTGGTTGGAGCTCCTCGGGAAAAGGCCTTTCCATCCCAA CAAGCCAACAGAACGGGAGGGCTGTACAGCTGTGACATCACATCTTCAGATACGCGCTGCACGCGTGTTGTGTTTGATG AAGACACTGACCCAAAGATGGAGAGCAAAGAAGACCAATGGATGGGTGTAACTGTCCAAAGTCAGGGGCCAGGAGGAAA CGTGGTGACATGTGCACATCGCTATGAGAAAAGGCAATATGTAAACACAGTGCAGGAAACCCGGGATATCATTGGAAGG TGCTACGTGCTGAGCCAGGATCTCACTATTAAGGATGATATGGATAATGGAGTATGGAGTTTTTGTGATGGCCGCTTAA GAGGCCATGAGAAGTTTGGTTCCTGTCAGCAAGGTGTTGCTGCTACTTTTACTAGAGACTATCATTACATTGTGTTTGG TGCCCCAGGCACTTACAATTGGAAAGGGGTGGTTCGTGCAGAGCAAAAGAATCAGACATTTTATGATCTGGGTATCTTT GATGATGGGCCTTACGAAGTTGGTGATGAGAGCCGCCAAGATAAGAATCTAGTTCCTGTTCCAGCTAACAGTTATTTAG GTTTCTCTTTGGATTCTGGTAAAGGAATCGTCTCCCAAGATGAGATGACTTTTGTGTCTGGTGCACCAAGGGCCAACCA TAGTGGAGCAGTTGTTTTACTGAAAAAGGAGAAAAATCAGAGAGCGCTTTCACTGGAGCACATGTTCGAAGGAGAAGGG CTGGCCTCTTCTTTTGGTTATGATGTGGCCGTTGTGGATCTCAACAGTGATGGATGGCAAGATATTGTGGTTGGAGCCC CGCAATACTTTGATAGAAGTGGAGATATCGGTGGTGCTGTGTACATCTACATTAACCAGCGAGGCAAATGGGAAGGAAT AAAACCTATTCGCTTAAATGGGACCGCTGACTCGATGTTTGGTCTCGCAGTTGAAAATGTTGGGGACATTAATCAGGAC GGATATCCAGATATTGCAGTAGGGGCTCCATATGATGGTTTTGGCAAAGTATATATATATCATGGATCCAAGAATGGAA TAAATACAGAACCAGCACAGATTCTTGATGGTGAAAAAACAGGCACCAATTTCTTTGGTTACTCTATTGCTGGAAACAT GGACCTGGATAAAAATTCCTACCCTGATATTGCTGTTGGTTCCCTTTCAGATTCTGTATCTGTGTTCAGATCTCGACCT GTCATAAGCATTACAAAAAGCATTACAGTACAGCCTGACAAACTTGACCTGAAGAAAAAGAACCCTGAAGACCCCAGTG AAATATGGATGGATGTGAAAGCATGTTTTCAATATACTGCAAACCCTCGTAATTTAAATCCAAGAATAAAGATCAACTA TACATTTGAAGCAGAAAATGAGAGGAGACAATTAGGCCTGCCATCTAGGGTACGGTTTAAAGACTATCTATCTGATCAG TTCACTGCAAGTACCACCCTAATAGGGCAGAACTCAAAACGGTGCGTGACAGCCAAGCTTGTTCTGCAGGAAAAAATTA AGGATAAGCTGCGCCCGATCCCTATAGCAGTCAGTGTTAATATTGCTGGCCTCGAGTCTGGCTCATCATCCACCAGAAA AGAGAGAGCGCTTCCGGACCTGATACCCATACTAAATTCAAACGAATCTGAAACAAAGATCACAAAAGTGGAGTTCTTG AAAGAAGGATGTGGAGAAGATAATGAATGTCACAGCAATCTGAAACTTCAGTACCGGTTTTGCACTAGAGAAGGAAATG AAGACAGATTTACCTATTTACCGATTGAAAATGGCATTCCAGTGCTTGTTTTAAAAGATCAGAAAGATATTGCCCTGGA AATAACAGTGACAAATAACCCATCTGACGCAAGAAATCCACAGAAAGATGGAGAAGATGCATATGAAGCTAAACTAATT GCAACGTTTCCAGATAGTCTGACTTATTCTGCATTCAGGGAGATGAGAGGATATCCTGAAAAACAGCTCACATGTGGTG CTAACCAAAATGGCTCTCAAGCAGAGTGTGAACTTGGAAATCCGTTCAAGAGAAATTCCAACGTAACCTTTTATCTGAT CTTAAGTACCACTAAAGTTAATGTTGATACAACAGACTTGGACATTAACCTCAAGCTGGAGACAACAAGCACTCAAGTA AATTCAACTGCAATTACAGCCAGTGCTAAAGTGGTTCTTGAATTGCTTTTATCGCTCACAGGAGTGGCTAAGCCTTCTC AGGTATATTTTGGAGGTAACATCGTTGGTGAGAGTGCTATGAAATCTGAAGATAATATTGGAAACCTCATCGAGTACGA ATTCAGAGTGACCAACTTGGGCAGGCCACTGAAAACATTTGGTACGGCTTCCCTGGACATCCAGTGGCCAAAAGAAATT AGTAATGGCAAATGGCTGCTGTATTTGATGAAAATAGAATCCAAGGGCTTGGAAAAAGTTTCCTGTCAACCACAGAATG AAATCAATGTTTTGCATGTTGCGGAATCCCATAATTCAAGAAGAAAGCGTGAGATTGCGGAGAAGCAGCTTACAGACAG CAAGACATTTTCTTTGTTTTCAGAAAGAAAATATAAGACCTTGGACTGCAAGGTGAATGCACAGTGCGTGGACATAAGA TGTCCATTGAAGGGTTTTGACAGCAAGGCATCAATTTTGCTGCGTTCCAGACTGTGGAACAGTACTTTCTTGGAAGAAT TTTCCAAAATGAACTACCTGGACATTCTTGTTAGAGCCTCAATCAGTGTTCCTGCTGCAGCTAAGAACGTCAAACTCAC AAATGAAGCTGCTCAGGTGCGCGTTACTGTCTTTCCTGCAAAACCAGTAGCCCTTTATACAGGAGTGCCTTGGTGGATC ATCGCAGTGGCTATTTTTGCTGGAGTACTGATGCTTGCACTCCTGGTATTCTTGTTATGGAAGTGTGGTTTCTTCAAAA GAAGTAAGAAAGATCATTACGATGCCACATATCACAAGGCTGAGATCCATGCTCAGCCATCTGATAAAGAGAGGCTTAC TTCTGATGCGTAGTATTGATCTACTTCTGTAATTGTGTGGGTTCTTCCAGCGTTCCAGGTACGATGACAGCGTCCCCCG CTATCATGCTGTAA
Citation	Yun Kee, Byung Joon Hwang, Paul W. Sternberg, Marianne Bronner-Fraser. Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev. 2007 February 15; 21(4): 391396.
Copyright	Copyright © 2007, Cold Spring Harbor Laboratory Press
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205289.1 ).