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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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FYN
FYN proto-oncogene, Src family tyrosine kinase

Gene

Official Symbol	FYN
Official Full Name	FYN proto-oncogene, Src family tyrosine kinase
CGNC ID	49738
also known as	tyrosine-protein kinase Fyn\|FYN oncogene related to SRC, FGR, YES\|c-fyn, fyn proto-oncogene\|p59-Fyn\|proto-oncogene c-Fyn\|proto-oncogene tyrosine-protein kinase Fyn
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_205349
Polypeptide	NP_990680

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	2534	ENSG00000010810		MIM:137025
Mouse	14360	ENSMUSG00000019843	All phenotypic alleles (7):Targeted, knock-out(3) Targeted, other(3) Gene trapped(1)	MGI:95602
Xenopus	100488004, 379812, 373609			6053488
Zebrafish	100331880, 574422, 373872	ENSDARG00000025319, ENSDARG00000011370	ZDB-GENE-050706-89, ZDB-GENE-030903-5	ZFIN:ZDB-GENE-050706-89, ZFIN:ZDB-GENE-030903-5

Gene Ontology

Molecular Function	ATP binding, metal ion binding, non-membrane spanning protein tyrosine kinase activity, more...
Biological Process	forebrain development, neuron migration, peptidyl-tyrosine phosphorylation, regulation of cell shape
Cellular Component

Links to other databases

Entrez Gene	396294
Ensembl Gene	ENSGALG00000015022
KEGG	gga:396294

Entry 1

GEISHA Id	FYN.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-ACAACTTCCATGCCACAG-3’
Reverse cDNA Template Primer	5’-ATTAACCCTCACTAAAGGTTCCCACGCATCTTTAGC-3’	cDNA Template Length	635
Complete cDNA Template Probe	show ACAACTTCCATGCCACAGGAGGCCAAGGACTGACAGTGTTTGGTGGAGTCAACTCCTCCTCTCATACAGGGACGCTGCG TACAAGAGGAGGAACAGGTGTAACTCTTTTTGTGGCGCTTTATGACTATGAAGCAAGAACAGAAGATGACTTAAGTTTT CATAAAGGAGAAAAATTTCAAATTCTTAACAGCTCGGAAGGAGACTGGTGGGAGGCTCGGTCCCTGACAACAGGCGAAA CTGGTTACATTCCCAGTAATTATGTGGCTCCAGTCGATTCCATCCAAGCAGAGGAGTGGTACTTCGGCAAACTTGGCCG AAAAGATGCTGAGAGGCAGCTGTTGTCATTTGGAAACCCAAGAGGTACCTTCCTGATCCGGGAAAGTGAAACTACCAAA GGTGCCTATTCCCTGTCTATCCGTGACTGGGATGATATGAAAGGAGATCATGTCAAACATTATAAGATTCGTAAACTTG ACAATGGTGGATATTATATCACAACTCGGGCACAATTTGAAACTCTTCAACAGCTGGTTCAACATTATTCAGAGAAAGC TGATGGTTTGTGTTTTAACTTAACTGTGATTGCTACGAATAATACCCCACAAACTGTTGGATTGGCTAAAGATGCGTGG GAA

Stage

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Comments (click to highlight)

7-12

stage 12

Unlabeled

19-24

stage 19

stage 22

stage 24

Eye
Foregut
Head Mesenchyme
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
Widespread Expression
Wing Mesenchyme

stage 25

Head Mesenchyme
Leg Mesenchyme
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	FYN.Kao.2009	Data Source	Publication
Complete cDNA Template Probe	show TGATTTTAGATAATGGGCTGTGTGCAATGTAAGGACAAAGAGGCAACAAAACTGACTGACGAGAGGGATGGGAGTTTAA CGCAAAGCTCAGGCTACCGCTATGGCACAGATCCCACGCCACAGCACTATCCAAGCTTTGGTGTGACTTCAATTCCAAA CTACAACAACTTCCATGCCACAGGAGGCCAAGGACTGACAGTGTTTGGTGGAGTCAACTCCTCCTCTCATACAGGGACG CTGCGTACAAGAGGAGGAACAGGTGTAACTCTTTTTGAGGCGCTTTATGACTATGAAGCAAGAACAGAAGATGACTTAA GTTTTCACAAAGGAGAAAAATTTCAAATTCTTAACAGCTCGGAAGGAGACTGGTGGGAGGCTCGGTCCCTGACAACAGG CGAAACTGGTTACATTCCCAGTAATTATGTGGCTCCAGTCGATTCCATCCAAGCAGAGGAGTGGTACTTCGGCAAACTT GGCCGAAAAGATGCTGAGAGGCAGCTGTTGTCATTTGGAAACCCAAGAGGTACCTTCCTGATCCGGGAAAGTGAAACTA CCAAAGGTGCCTATTCCCTGTCTATCCGTGACTGGGATGATATGAAAGGAGATCATGTCAAACATTATAAGATTCGTAA ACTTGACAATGGTGGATATTATATCACAACTCGGGCACAATTTGAAACTCTTCAACAGCTGGTTCAACATTACTCAGAG AAAGCTGATGGTTTGTGTTTTAACTTAACTGTGATTGCTACGAATAATACCCCACAAACTGTTGGATTGGCTAAAGATG CGTGGGAAGTTGCACGTGATTCATTATTTCTGGAACAGAAGCTTGGTCAGGGCTGTTTCGCTGAAGTGTGGCGTGGTAC ATGGAATGGAAATACTAAAGTGGCTATCAAGACTCTGAAGCCTGGCACTATGTCTCCAGAATCATTCTTGGAGGAAGCC CAAATCATGAAGAAGCTAAAACATGACAAACTGGTCCAGCTTTATGCTGTGGTGTCTAGGAGGCCCATCTATATCGTCA CAGAGTACATGAGCAAAGGGAGCTTGCTGATTTTCTTAAAAGACGGAGAAGGAAGAGCTCTGAAGCTACCAAACTTAGT GGACATGGCAGCTCAGGTGGCTGCAGGAATGGCATATATTGAACGAATGAATTACATACACAGAGATCTGAGATCTGCA AACATTCTGGTGGGGAATGGACTAATATGCAAGATTGCTGACTTTGGATTAGCAAGGCTGATCGAAGACAACGAGTATA CAGCAAGACAAGGTGCAAAGTTTCCCATTAAATGGACTGCACCAGAAGCGGCATTGTATGGAAGGTTCACAATAAAGTC AGACGTGTGGTCTTTTGGGATCCTACTGACAGAGCTGGTAACAAAAGGAAGAGTGCCATACCCAGGCATGAATAACCGT GAAGTCTTGGAGCAAGTAGAACGCGGTTATCGGATGCCATGTCCTCAGGACTGTCCCATCTCCTTGCACGAGCTTATGA TCCACTGCTGGAAAAAAGACCCAGAGGAGCGTCCAACTTTTGAATATTTGCAGGGTTTTCTCGAAGACTACTTCACTGC AACAGAACCCCAGTACCAGCCCGGTGACAACCTGTAACTCCCTGGTCTCCACACACTGTCACGAATTGCCAGGTGTCCC TG
Citation	Kao TJ, Palmesino E, Kania A. SRC family kinases are required for limb trajectory selection by spinal motor axons. J Neurosci. 2009 Apr 29;29(17):5690-700.
Copyright	Copyright © 2009-12 by the Society for Neuroscience
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205349.1).