GEISHA - A Chicken Embryo Gene Expression Database
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TPM1
tropomyosin 1 (alpha)

Gene
Official SymbolTPM1
Official Full Nametropomyosin 1 (alpha)
CGNC ID49772
also known asalpha-fTM, tropomyosin alpha-1 chain|alpha tropomyosin of brain|alpha tropomyosin of fibroblasts F2|alpha-tropomyosin 1|alpha-tropomyosin 2|alpha-tropomyosin of skeletal fast muscle|tropomyosin (CTm4)|tropomyosin (CTm7)|tropomyosin-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205401
PolypeptideNP_990732
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4108
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse22003ENSMUSG00000032366All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:98809
Xenopus448541, 100189579485945
Zebrafish393908ENSDARG00000087402ZDB-GENE-040426-854ZFIN:ZDB-GENE-040426-854
Gene Ontology
Molecular Functionactin binding, protein binding
Biological Process
Cellular Componentcytoplasm, cytoskeleton
Links to other databases
Entrez Gene396366
Ensembl Gene
KEGGgga:396366
GEISHA IdAlpha-Tropomyosin.Wang.1996Data SourcePublication
Complete cDNA Template Probeshow
CATATCAGTGAGAGCTCCCCGCCCGCCGCCCGCTCACCACCGGCGCCCGTCCCGCACTCGTTGGCCCCAGCGCTCCCCG
GGGCCGCGGCTCGGATTCGTATCGGGGCTCTCCCGCCGCTTTCCCTGCTCTGATTTCGGCTGTACTTCTCGCGGGAACC
CCTAACCCACCGCCGCCATGGATGCCATCAAGAAAAAGATGCAGATGCTGAAACTGGACAAGGAGAATGCCTTGGACAG
AGCCGAGCAAGCCGAAGCGGACAAGAAGGCAGCGGAGGAGAGGAGCAAGCAGCTGGAGGACGAGCTGGTGGCTCTGCAA
AAGAAGCTGAAGGGCACTGAGGATGAGCTGGACAAATACTCCGAGTCCCTTAAAGATGCACAGGAAAAGTTGGAACTGG
CTGACAAAAAGGCCACAGATGCTGAGAGTGAAGTAGCTTCCCTGAACAGACGCATCCAACTGGTTGAGGAAGAGTTGGA
TCGGGCTCAGGAGCGCTTGGCTACTGCCCTGCAGAAGCTGGAGGAGGCTGAGAAGGCTGCAGATGAGAGTGAAAGAGGA
ATGAAGGTCATTGAAAATAGAGCCCAGAAGGATGAAGAGAAGATGGAAATCCAAGAGATCCAGCTTAAAGAAGCTAAGC
ACATTGCTGAAGAGGCTGACCGCAAGTATGAAGAGGTGGCTCGTAAGCTCGTGATCATTGAGGGTGACCTGGAGCGGGC
TGAGGAGCGTGCTGAACTATCAGAAAGCCAAGTCCGACAGCTGGAAGAACAGTTAAGAATAATGGATCAAACCTTGAAA
GCATTAATGGCTGCAGAGGATAAGTACTCGCAGAAAGAAGACAAATATGAAGAGGAGATTAAAGTTCTAACTGACAAAC
TGAAGGAGGCTGAGACCCGTGCTGAATTTGCTGAGAGGTCAGTAACCAAGCTGGAGAAGAGCATTGATGATCTAGAAGA
GAAAGTGGCGCATGCCAAAGAAGAAAACCTTAATATGCATCAGATGCTGGATCAAACTTTACTGGAGTTAAACAACATG
TGAAAACCTTCTTAGCAGCAACCACATTGTTATTATTTTTACACCTGCTTGCCGTGAAGCCCATAAACATGTCTTTATT
TTAGTTTCACCACAGTCACAAGAACATCAGCTAAATTATCAGGCAGGGGTCAGGGAAACACCAAAAAGGGCAAGCTGTA
TGCGGGTTAAGCTATTTCATTATGGTTTAAATGTGCCATTTCCCAACCAAATGTTACCTACACTTTGTAGAGAGTTCAG
CAATTGGAATGCTTAGTCTTCAGAAGAATCCTGGCTGTGTCAGATCGTGTCCCACCTCAAGTGCCAACCTCAATTTTTA
ACAAGAATGATACATCTTCAAAAAAGGG
CitationWang DZ, Hu X, Lin JL, Kitten GT, Solursh M, Lin JJ. Differential displaying of mRNAs from the atrioventricular region of developing chicken hearts at stages 15 and 21. Front Biosci. 1996 Jan 1;1:a1-15.
CopyrightCopyright © 2015 Frontiers in Bioscience. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (Acc. # NM_205401.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 15
Atria
Myocardium
Outflow Tract
 
19-21
stage 21
Myocardium
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4108

Mouse

EmageMGI:98809
EurexpressMGI:98809
MGI GXDMGI:98809

Frog

Xenbase485945

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-854
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