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NTN3
netrin 1

Gene
Official SymbolNTN3
Official Full Namenetrin 1
CGNC ID16557
also known asNTN1, netrin-3, netrin-3|netrin 3|netrin-2
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001277605
PolypeptideNP_001264534
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.792
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly32400FBgn0015774
Human9423ENSG00000065320MIM:601614
Mouse18208ENSMUSG00000020902All phenotypic alleles (3):Targeted, knock-out(1) Gene trapped(2) MGI:105088
Xenopus779839, 373694989334
Zebrafish30227, 30192ENSDARG00000033733, ENSDARG00000022531ZDB-GENE-990415-169, ZDB-GENE-990415-168ZFIN:ZDB-GENE-990415-169, ZFIN:ZDB-GENE-990415-168
Gene Ontology
Molecular Function
Biological Processmyoblast fusion, regulation of transcription, DNA-templated
Cellular Componentproteinaceous extracellular matrix
Links to other databases
Entrez Gene396387
Ensembl Gene
KEGGgga:396387

Entry 1

GEISHA IdNetrin2.Riley.2010Data SourcePublication
Complete cDNA Template Probeshow
TCCTGCGCCTGCTGCTCACCACCAGCGTGCTCCGCCTGGCACGAGCTGCAAACCCCTTCGTGGCTCAGCAGACACCCCC
AGACCCCTGCTACGATGAGAGCGGGGCTCCCCGCCGCTGCATCCCCGAGTTCGTCAACGCCGCCTTTGGGAAGGAGGTG
CAGGCTTCCAGCACCTGTGGGAAGCCCCCAACACGGCACTGCGATGCCTCGGACCCCCGCCGAGCCCACCCACCCGCCT
ACCTGACCGACCTCAACACCGCCGCCAACATGACGTGCTGGCGCTCCGAGACCCTGCACCACCTGCCCCACAACGTCAC
CCTCACCCTTTCCCTCGGCAAGAAGTTTGAGGTGGTCTACGTCAGCCTCCAGTTCTGCTCGCCCCGGCCGGAGTCCACC
GCCATCTTCAAGTCCATGGACTACGGCAAGACGTGGGTGCCCTACCAGTACTACTCCTCGCAGTGCCGCAAGATCTACG
GCAAGCCCAGCAAGGCCACCGTCACCAAGCAGAACGAGCAGGAGGCGCTGTGCACCGATGGCCTCACCGACCTCTACCC
GCTCACTGGCGGCCTCATCGCCTTCAGCACGCTCGACGGGCGGCCCTCGGCCCAGGACTTCGACAGCAGCCCTGTGCTG
CAGGACTGGGTGACGGCCACCGACATCCGGGTGGTGTTCAGCCGTCCCCACCTCTTCCGCGAGCTGGGGGGCCGCGAGG
CTGGCGAGGAGGACGGGGGGGCCGGGGCCACCCCCTACTACTACTCGGTGGGCGAGCTGCAGGTCGGCGGGCGCTGCAA
GTGCAACGGGCACGCCTCGCGCTGCGTCAAGGACAAGGAGCAGAAGCTGGTGTGTGACTGCAAGCACAACACCGAGGGG
CCCGAGTGCGACCGCTGCAAGCCCTTCCACTACGACCGGCCGTGGCAGCGGGCCAGCGCCCGCGAGGCCAACGAGTGCC
TGGCCTGCAACTGCAACCTGCACGCTCGGCGCTGCCGCTTCAACATGGAGCTGTATAAGCTGTCCGGCAGGAAGAGCGG
CGGCGTTTGCCTCAACTGCCGACACAACACGGCTGGGAGGCACTGCCACTACTGCAAGGAGGGCTTCTACCGGGACCTC
AGCAAGTCCATCACGGACCGCAAGGCCTGCAAAGCCTGTGACTGCCACCCAGTTGGTGCTGCTGGCAAGACCTGCAACC
AAACAACAGGGCAGTGCCCGTGCAAGGACGGCGTGACCGGCCTCACCTGCAACCGCTGCGCCAAGGGCTTCCAGCAGAG
CCGCTCGCCTGTGGCCCCCTGCATCAAGATCCCTGCCATCAACCCGACCTCTCTTGTCACCAGCACGGAGGCACCTGCA
GACTGTGACTCCTACTGCAAGCCAGCCAAAGGCAACTACAAGATTAACATGAAGAAGTACTGCAAGAAGGATTACGTGG
TCCAAGTGAACATTTTGGAAATGGAGACGGTGGCCAACTGGGCCAAGTTCACCATCAACATCCTCTCTGTCTACAAGTG
CCGCGACGAGCGGGTCAAGCGCGGAGACAACTTCTTGTGGATCCACCTCAAGGACCTGTCCTGCAAGTGCCCCAAAATC
CAGATCAGCAAGAAGTACCTGGTGATGGGCATCAGCGAGAACTCCACCGACCGGCCGGGACTGATGGCCGACAAGAACA
GCCTGGTCATCCAGTGGAGGGACGCCTGGACTCGCCGCCTTCGGAAACTGCAGCGGAGGGAGAAGAAAGGGAAGTGTGT
GAAGCCCTGAGGGCCTCGTGCCCCACGCGGGTCCCGGCCCCACTGCACACGCAGACCATGCCCAGAGACTCTGTACATA
CATATCGTGTGAACGGACTCTTCTGTCTATAGTGTATATTTTGGCAACGGTTCCCCTTTTTGTGTGCGTGTGCACGCGT
GGGTGTGTGCACGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTCTCCTCTCAGTGTGTATTAAAAATAAGGCGG
TAATGACAAACCTTTAATGAGGAGCAAAGCAGAGGGGGTCCTGTGGGTGCCTGCTGCCTGAAGGAGCTTGAGGGGCTGG
TTTCTTGCTCCGGGCGTGCTGTTCCTCACCCTTCTGTCCTACTCTCTCTTTCCCCTTGAGCAAAACCTTCTGCCCAGTG
CTGCTGTCTGAGCTCGCGGCTCTCCCTGCTGCAGAGCCCGGTCCCTCTCACGTGCTGCACATGTGCTGCTCTCAGCTCT
CTGTGCCCCTTTTCTTGTGCAGCAGAGACGGGAGGTCGGTTTCCTCCATCCCGCTGCACACACGGACCGGCTGGGTGGA
GACCATCCAGCGCTGCAGGACCGGCCCCAGGAGCTCCGCTGGGAGAACCAAGTGACCTTTCTCCAGGCCTGATCCTGCA
GGACCTCAGCTTTACATGGACTGGTCGTGCCGCCCAGGGGCAGGGCCCATGGAAGTCTTGGGGACAGCCAGGGCTGTTG
GCCACCACCCCACAGAGCTGTTCTGAGCAGGGCGCAGGGGTCTGCCTGTCCTGGTGCGTGGTCCAGGTGACCCATCAGG
AAAGACCTGCAGATACCCATATTCTCCTCTCGTGCCAGCTCTGCATGCTGCTGTGACCTTGGCCGTGCCAGAGGTGCAG
AGGCAGAGGTGGCAGGAAGAGAGGAGAGCTTTCGCTGACCAACCTCCAGTCTTTCATTTCTTCTGCATACTGTATTAGT
CTCCAGTTCAAACAGACATCAGTTTCTTTCCACGTTGAGGTTATAGTGGTCTCGATGTAATAAACATGAATGGAAATAA
TA
CitationRiley KL, Gledhill S, Schubert FR. Early expression of axon guidance molecules in the embryonic chick mesencephalon and pretectum. Int J Dev Biol. 2010;54(4):743-53.
CommentsAuthors indicated probe was indicated in another reference (NCBI acc# L34550.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
stage 18
Isthmus/MHB
Midbrain
 
19-20
stage 20
Midbrain
 

Entry 2

GEISHA IdNETRIN2.Abraira.2010Data SourcePublication
Complete cDNA Template Probeshow
ATGCCGTGCCACCCCTCACTCTGTGCTCTTATCCCAGGGAGGATGGAGGCCCCTCAGCTCCTGCGCCTGCTGCTCACCA
CCAGCGTGCTCCGCCTGGCACGAGCTGCAAACCCCTTCGTGGCTCAGCAGACACCCCCAGACCCCTGCTACGATGAGAG
CGGGGCTCCCCGCCGCTGCATCCCCGAGTTCGTCAACGCCGCCTTTGGGAAGGAGGTGCAGGCTTCCAGCACCTGTGGG
AAGCCCCCAACACGGCACTGCGATGCCTCGGACCCCCGCCGAGCCCACCCACCCGCCTACCTGACCGACCTCAACACCG
CCGCCAACATGACGTGCTGGCGCTCCGAGACCCTGCACCACCTGCCCCACAACGTCACCCTCACCCTTTCCCTCGGCAA
GAAGTTTGAGGTGGTCTACGTCAGCCTCCAGTTCTGCTCGCCCCGGCCGGAGTCCACCGCCATCTTCAAGTCCATGGAC
TACGGCAAGACGTGGGTGCCCTACCAGTACTACTCCTCGCAGTGCCGCAAGATCTACGGCAAGCCCAGCAAGGCCACCG
TCACCAAGCAGAACGAGCAGGAGGCGCTGTGCACCGATGGCCTCACCGACCTCTACCCGCTCACTGGCGGCCTCATCGC
CTTCAGCACGCTCGACGGGCGGCCCTCGGCCCAGGACTTCGACAGCAGCCCTGTGCTGCAGGACTGGGTGACGGCCACC
GACATCCGGGTGGTGTTCAGCCGTCCCCACCTCTTCCGCGAGCTGGGGGGCCGCGAGGCTGGCGAGGAGGACGGGGGGG
CCGGGGCCACCCCCTACTACTACTCGGTGGGCGAGCTGCAGGTCGGCGGGCGCTGCAAGTGCAACGGGCACGCCTCGCG
CTGCGTCAAGGACAAGGAGCAGAAGCTGGTGTGTGACTGCAAGCACAACACCGAGGGGCCCGAGTGCGACCGCTGCAAG
CCCTTCCACTACGACCGGCCGTGGCAGCGGGCCAGCGCCCGCGAGGCCAACGAGTGCCTGGCCTGCAACTGCAACCTGC
ACGCTCGGCGCTGCCGCTTCAACATGGAGCTGTATAAGCTGTCCGGCAGGAAGAGCGGCGGCGTTTGCCTCAACTGCCG
ACACAACACGGCTGGGAGGCACTGCCACTACTGCAAGGAGGGCTTCTACCGGGACCTCAGCAAGTCCATCACGGACCGC
AAGGCCTGCAAAGCCTGTGACTGCCACCCAGTTGGTGCTGCTGGCAAGACCTGCAACCAAACAACAGGGCAGTGCCCGT
GCAAGGACGGCGTGACCGGCCTCACCTGCAACCGCTGCGCCAAGGGCTTCCAGCAGAGCCGCTCGCCTGTGGCCCCCTG
CATCAAGATCCCTGCCATCAACCCGACCTCTCTTGTCACCAGCACGGAGGCACCTGCAGACTGTGACTCCTACTGCAAG
CCAGCCAAAGGCAACTACAAGATTAACATGAAGAAGTACTGCAAGAAGGATTACGTGGTCCAAGTGAACATTTTGGAAA
TGGAGACGGTGGCCAACTGGGCCAAGTTCACCATCAACATCCTCTCTGTCTACAAGTGCCGCGACGAGCGGGTCAAGCG
CGGAGACAACTTCTTGTGGATCCACCTCAAGGACCTGTCCTGCAAGTGCCCCAAAATCCAGATCAGCAAGAAGTACCTG
GTGATGGGCATCAGCGAGAACTCCACCGACCGGCCGGGACTGATGGCCGACAAGAACAGCCTGGTCATCCAGTGGAGGG
ACGCCTGGACTCGCCGCCTTCGGAAACTGCAGCGGAGGGAGAAGAAAGGGAAGTGTGTGAAGCCCTGAGGGCCTCGTGC
CCCACGCGGGTCCCGGCCCCACTGCACACGCAGACCATGCCCAGAGACTCTGTACATACATATCGTGTGAACGGACTCT
TCTGTCTATAGTGTATATTTTGGCAACGGTTCCCCTTTTTGTGTGCGTGTGCACGCGTGGGTGTGTGCACGTGTGTGTG
CGTGTGTGTGTGTGTGTGTGTGTGTGTCTCCTCTCAGTGTGTATTAAAAATAAGGCGGTAATGACAAACCTTTAATGAG
GAGCAAAGCAGAGGGGGTCCTGTGGGTGCCTGCTGCCTGAAGGAGCTTGAGGGGCTGGTTTCTTGCTCCGGGCGTGCTG
TTCCTCACCCTTCTGTCCTACTCTCTCTTTCCCCTTGAGCAAAACCTTCTGCCCAGTGCTGCTGTCTGAGCTCGCGGCT
CTCCCTGCTGCAGAGCCCGGTCCCTCTCACGTGCTGCACATGTGCTGCTCTCAGCTCTCTGTGCCCCTTTTCTTGTGCA
GCAGAGACGGGAGGTCGGTTTCCTCCATCCCGCTGCACACACGGACCGGCTGGGTGGAGACCATCCAGCGCTGCAGGAC
CGGCCCCAGGAGCTCCGCTGGGAGAACCAAGTGACCTTTCTCCAGGCCTGATCCTGCAGGACCTCAGCTTTACATGGAC
TGGTCGTGCCGCCCAGGGGCAGGGCCCATGGAAGTCTTGGGGACAGCCAGGGCTGTTGGCCACCACCCCACAGAGCTGT
TCTGAGCAGGGCGCAGGGGTCTGCCTGTCCTGGTGCGTGGTCCAGGTGACCCATCAGGAAAGACCTGCAGATACCCATA
TTCTCCTCTCGTGCCAGCTCTGCATGCTGCTGTGACCTTGGCCGTGCCAGAGGTGCAGAGGCAGAGGTGGCAGGAAGAG
AGGAGAGCTTTCGCTGACCAACCTCCAGTCTTTCATTTCTTCTGCATACTGTATTAGTCTCCAGTTCAAACAGACATCA
GTTTCTTTCCACGTTGAGGTTATAGTGGTCTCGATGTAATAAACATGAATGGAAATAATA
CitationAbraira VE, Satoh T, Fekete DM, Goodrich LV. Vertebrate Lrig3-ErbB interactions occur in vitro but are unlikely to play a role in Lrig3-dependent inner ear morphogenesis. Dev Biol. 2010 Apr 15;340(2):595-604. Epub 2010 Feb 18.
CopyrightCopyright Abraira et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
CommentsAs insufficient information is provided in the publication to verify the exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (acc # NM_001277605.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-29
stage 26
stage 29
stage 29
stage 29
stage 29
Ear/Otic Placode
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.792

Mouse

EmageMGI:105088
EurexpressMGI:105088
MGI GXDMGI:105088

Frog

Xenbase989334

Fruit Fly

BDGPFBgn0015774

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990415-169, ZDB-GENE-990415-168
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