GEISHA - A Chicken Embryo Gene Expression Database
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P3H1
prolyl 3-hydroxylase 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolP3H1
Official Full Nameprolyl 3-hydroxylase 1
CGNC ID3587
also known asLEPRE1, prolyl 3-hydroxylase 1|leprecan 1|leprecan-1 homolog|leucine proline-enriched proteoglycan (leprecan) 1|leucine- and proline-enriched proteoglycan 1 homolog
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001001529
PolypeptideNP_001001529
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9766
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human64175ENSG00000117385MIM:610915MIM:610339
Mouse56401ENSMUSG00000028641All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1888921
Xenopus100036679, 414447989358
Zebrafish553321ENSDARG00000071212ZDB-GENE-031010-35ZFIN:ZDB-GENE-031010-35
Gene Ontology
Molecular Functioncollagen binding, iron ion binding, L-ascorbic acid binding, procollagen-proline 3-dioxygenase activity, more...protein binding, protein complex binding
Biological Processchaperone-mediated protein folding, collagen metabolic process
Cellular Componentendoplasmic reticulum, macromolecular complex
Links to other databases
Entrez Gene414142
Ensembl GeneENSGALG00000004833
KEGGgga:414142
GEISHA IdLEPRE1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerATCTGCTGTTCTTTCGGGGG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGGGTTCATCACCTCATCATTTGGGcDNA Template Length702
Forward cDNA Template Probeshow
ANNNNNAAACACAGAAGATTTTGGCATATTCAATCGCTTTTTCATAATTCCCATTGTTGTAGTAGGCAAACTGCAAGTA
GTTGAAATGTGAGGGCAGGAAATCCTCCAGGGGCTTCTCCCGGCCAGGCTGCGAGGCGAGCTCTGTGACGCAGCCCTGC
TTGCAGCTCAGCACCTGCATGTAGTGATCTGTCATGGCCTGGAACAGGTCTGCGTTGTACTCCAGGTAGTTGTAGCCTT
CATAGTCATAGGGCCCCTCACAGAGAGCACGGCACTCGGTGTCTGCCACAAAGTATTCCTGCAGTGCCTTCTCCAGGTG
CAGGACAGCAGCAGCCGGCTGCTCCTCGCTGTAGAACCTGACACCCAGGCGGAACTCTGTCATGTGGGGCCTGGCCTCC
AGGTCAGCGAAGTCGGACTCCCTGACGCCCGCCATCATCTGGTAGTACTCCAGGTTCTGCTTCATCTCCACGTGCTCGG
GGTTGGCCACAAAGAAGGTGTGGGCTGCAGCCACGGCCTTCGCCACCTTATTGATCTTGAAGTAGGCGACCTGGAGGTA
GTTGTAGGGGCTCCGNTTGCGGAACTCTCGCTCCAGCTCCTCGCCCAGGCGGTACCGGGAGGGCTGGGTGGGCCCGCAG
CCCCGCAGACAGGCGGCGCGCCGCAGCAGCCCCCGAAAAACAAGCAGATAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Unlabeled
 
7-12
stage 8
stage 8
stage 9
stage 9
stage 11
Amnion
Anterior Intestinal Portal
Area Opaca
Blood Islands
Forebrain
Foregut
Head Mesenchyme
Head Process
Heart
Heart Tube
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Sinus Venosus
Somites
Splanchnic Mesoderm
 
13-18
stage 17
stage 18
Notochord
 
19-24
stage 22
stage 22
stage 22
stage 23
Allantois
Aorta
Dermomyotome
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Mesonephros
Myotome
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
Allantois
Amnion
Aorta
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Mesonephros
Myotome
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Wing Mesenchyme
dorsal mesentery
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9766

Mouse

EmageMGI:1888921
EurexpressMGI:1888921
MGI GXDMGI:1888921

Frog

Xenbase989358

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-031010-35
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