GEISHA - A Chicken Embryo Gene Expression Database
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CDH2
cadherin 2

Gene
Official SymbolCDH2
Official Full Namecadherin 2
CGNC ID11259
also known ascadherin-2, cadherin-2|N-cadherin|cadherin 2, type 1, N-cadherin (neuronal)|neural cadherin|neural calcium-dependent cell adhesion molecule, Neural-cadherin precursor, N-cadherin, Cadherin-2
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001001615
PolypeptideNP_001001615
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.1917
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1000ENSG00000170558MIM:114020
Mouse12558ENSMUSG00000024304All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(3) Gene trapped(1) MGI:88355
Xenopus100151712, 495284, 378518951658
Zebrafish30291ENSDARG00000018693ZDB-GENE-990415-171ZFIN:ZDB-GENE-990415-171
Gene Ontology
Molecular Functionalpha-catenin binding, calcium ion binding, extracellular matrix binding, gamma-catenin binding, more...protein binding, protein phosphatase binding
Biological Processblood vessel morphogenesis, calcium-dependent cell-cell adhesion, cartilage condensation, cell adhesion, more...cell migration, heterophilic cell-cell adhesion, homophilic cell adhesion, limb development, negative regulation of canonical Wnt signaling pathway, positive regulation of MAPK cascade, striated muscle cell differentiation
Cellular Componentadherens junction, apical plasma membrane, catenin complex, fascia adherens, integral component of membrane, more...lamellipodium, synapse
Links to other databases
Entrez Gene414745
Ensembl GeneENSGALG00000015132
KEGGgga:414745

Entry 1

GEISHA IdI17Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTGTC
CATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTACTT
GCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAAAC
TTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAATC
GATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTGGT
ACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAACAC
TGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
stage 3
Area Pellucida
Primitive Streak
 
4-6
stage 4
Area Pellucida
Primitive Streak
 
7-12
stage 8
stage 11
stage 12
stage 12
stage 12
Anterior Intestinal Portal
Heart
Notochord
Primitive Streak
 

Entry 2

GEISHA IdCDH2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATTGACAACTTTCACTGCT
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGTAAGAGGGAATCGTATcDNA Template Length1068
Complete cDNA Template Probeshow
TTTTTTAAAAAATTTGGCCACCATTGATTTCATGCAGGGACCCAAACTACTCAGAAGTTTTTAGCTAAAATTTCGGACC
GCAAACGTGGTAAAAATTGACCCTGTTAATGGACAAATAACACCACAGCGTGTTTTGGACAGAGAATCGATTATGTGCA
AAACAATATGTATAATGGCAACTTTTCTTGCCTCTGATAATGGATTCCTCCAATGAGTGGAACTGGTACACTTCAGATA
TACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAACACTGCAGCCTAATG
CTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTGCCTGATTCACCTCC
TAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGATCAGGTTCCTGGAG
GCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTCTGTGCTAAAAGTGA
AAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTGGGCACTGGTGCCAT
CATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGAAGCGCCGTGATAAG
GAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATATGATGAAGAAGGTG
GTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAAACCAGACGCCATCAAAACCTGT
TGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTGCTCCTCATCCCTGG
GGCATTGGGACCTTCCATTAATGAGGGACTTAAGCCGCGACCACGACCCCCTTACAGCCTCTACTTGGGGTAATTTTTT
AAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Early Endoderm
Early Mesoderm
Primitive Streak
 
4-6
stage 4
stage 4
stage 5
stage 6
stage 6
Early Endoderm
Early Mesoderm
Endoderm
Mesoderm
Notochord
Primitive Streak
 
7-12
stage 7
stage 8
stage 9
stage 9
stage 10
stage 10
stage 11
stage 11
stage 11
stage 11
stage 11
stage 11
Anterior Intestinal Portal
Endoderm
Heart
Heart Tube
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
Sections pending.
13-18
stage 16
Eye
Forebrain
Head Mesenchyme
Heart
Hindbrain
Midbrain
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Sections pending.
19-24
stage 20
stage 21
stage 22
Eye
Forebrain
Head Mesenchyme
Heart
Hindbrain
Midbrain
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Tail
Sections pending.
25
stage 25
stage 25
Eye
Forebrain
Head Mesenchyme
Heart
Hindbrain
Lateral Plate Mesoderm
Leg
Midbrain
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Wing
Right
Sections pending.

Entry 3

GEISHA IdN-Cad.Jiankai.2007Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTGAATTCTTGCATCAGGTTTGGAATG
GGACAGTTCCTGAAGGATCAAAGCCAGGAACCTATGTAATGACTGTTACTGCCATCGATGCTGATGATCCCAATGCACA
GAATGGGATGCTGAGATACAGAATCTTGTCACAGGCACCAAGCAGTCCCTCTCCCAACATGTTTACAATCAACAATGAG
ACTGGTGACATTATTACCGTAGCAGCTGGGCTCGACAGAGAGAAAGTACAACAGTATACATTAATAATTCAAGCTACGG
ACATGGAAGGAAACCCAACATATGGTCTTTCAAACACAGCAACTGCTGTCATCACTGTGACAGATGTCAATGACAATCC
TCCAGAGTTCACTGCTATGACTTTCTACGGTGAAGTACCAGAAAACAGAGTGGATGTCATAGTGGCTAACCTAACAGTA
ACAGATAAAGATCAGCCACACACGCCTGCGTGGAATGCGAGGTACCAAATGACAGGGGGAGACCCGACAGGCCAGTTTA
CTATCCTGACCGATCCAAATAGCAATGATGGGTTGGTAACTGTTGTCAAGCCCATTGACTTTGAGACCAACAGGATGTT
TGTACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTG
TCCATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTAC
TTGCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAA
ACTTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAA
TCGATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTG
GTACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAAC
ACTGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTG
CCTGATTCACCTCCTAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGA
TCAGGTTCCTGGAGGCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTC
TGTGCTAAAAGTGAAAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTG
GGCACTGGTGCCATCATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGA
AGCGCCGTGATAAGGAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATA
TGATGAAGAAGGTGGTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAGAACCAGAC
GCCATCAAACCTGTTGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTG
CTCCTCATCCTGGGGACATTGGGGACTTCATTAATGAGGGACTTAAAGCAGCCGACAACGACCCTACAGCCCCGCCATA
CGATTCCCTCTTAGTCTTTGACTATGAAGGAAGCGGCTCCACTGCTGGATCCTTGAGCTCTCTTAATTCCTCAAGTAGC
GGTGGTGAGCAAGACTATGACTACCTAAATGACTGGGGCCCACGTTTCAAGAAACTTGCTGACATGTACGGTGGAGGTG
ATGACTGAACTTCAAAGTGAACTTTGTTTCTGGACAAGTACAAACATTTCAACTGATATTCCCCAAAAGCATACAGAAG
CTAGGCTTTAACTTTGTAGTCTACTAGCACAAGTGCTTGCTGAAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCC
GTGGAATATCAGTGATCCAATGCTGTTTGGAAAAAAATATTGAGCTCAGTTACACTTGAATTTTACAGTACAGAAGCAC
TGGGATTTTATGTGCCTTTTTGTACCTTTTTCAGATCGGAATTAGTTTTATGTTTAAGGCTTTAATGGTACTGATTTAT
GAAATGATGCATTAAAGAGACAAGATATGTTGGGGTGGGGAGGAGTAAGGTGAATCACAATGCGCTTCAATATGCTTTT
GTTACATCGCATTGCTTTTATTAAAATAAGGAGACTGAAAATT
CitationLuo J, Wang H, Lin J, Redies C. Cadherin expression in the developing chicken cochlea. Dev Dyn. 2007 Aug;236(8):2331-7.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsAuthors indicate: ""For in situ hybridization, purified plasmids containing the full-length sequences encoding chicken Cad6B, Cad7, N-Cad, and R-Cad (kind gifts of Dr. S. Nakagawa and Dr. M. Takeichi), ... were used as templates for the in vitro synthesis of cRNA probes." Sequence below was obtained from NCBI (NM_001001615).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 37
stage 40
stage 44
Ear/Otic Placcode
 

Entry 4

GEISHA IdN-Cadherin.Matsumata.2005Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTG
CitationMatsumata M, Uchikawa M, Kamachi Y, Kondoh H. Multiple N-cadherin enhancers identified by systematic functional screening indicate its Group B1 SOX-dependent regulation in neural and placodal development. Dev Biol. 2005 Oct 15;286(2):601-17. Epub 2005 Sep 16.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsAccording to the authors, "The N-cadherin probe was a 5′ fragment of the cDNA (positions 1–845; DDBJ database accession number X07277)."
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11
stage 12
stage 12
stage 12
Central Nervous System
Ear/Otic Placcode
Ectoderm
Eye
Heart
Lens
Sensory Organs
Somites
Lens placode
13-14
stage 13
stage 13
stage 14
stage 14
Eye
Lens
Nasal Placcode/Nerve
Lens placode

Entry 5

GEISHA IdNcadherin.Garcia-Castro.2000Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTGAATTCTTGCATCAGGTTTGGAATG
GGACAGTTCCTGAAGGATCAAAGCCAGGAACCTATGTAATGACTGTTACTGCCATCGATGCTGATGATCCCAATGCACA
GAATGGGATGCTGAGATACAGAATCTTGTCACAGGCACCAAGCAGTCCCTCTCCCAACATGTTTACAATCAACAATGAG
ACTGGTGACATTATTACCGTAGCAGCTGGGCTCGACAGAGAGAAAGTACAACAGTATACATTAATAATTCAAGCTACGG
ACATGGAAGGAAACCCAACATATGGTCTTTCAAACACAGCAACTGCTGTCATCACTGTGACAGATGTCAATGACAATCC
TCCAGAGTTCACTGCTATGACTTTCTACGGTGAAGTACCAGAAAACAGAGTGGATGTCATAGTGGCTAACCTAACAGTA
ACAGATAAAGATCAGCCACACACGCCTGCGTGGAATGCGAGGTACCAAATGACAGGGGGAGACCCGACAGGCCAGTTTA
CTATCCTGACCGATCCAAATAGCAATGATGGGTTGGTAACTGTTGTCAAGCCCATTGACTTTGAGACCAACAGGATGTT
TGTACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTG
TCCATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTAC
TTGCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAA
ACTTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAA
TCGATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTG
GTACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAAC
ACTGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTG
CCTGATTCACCTCCTAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGA
TCAGGTTCCTGGAGGCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTC
TGTGCTAAAAGTGAAAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTG
GGCACTGGTGCCATCATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGA
AGCGCCGTGATAAGGAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATA
TGATGAAGAAGGTGGTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAGAACCAGAC
GCCATCAAACCTGTTGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTG
CTCCTCATCCTGGGGACATTGGGGACTTCATTAATGAGGGACTTAAAGCAGCCGACAACGACCCTACAGCCCCGCCATA
CGATTCCCTCTTAGTCTTTGACTATGAAGGAAGCGGCTCCACTGCTGGATCCTTGAGCTCTCTTAATTCCTCAAGTAGC
GGTGGTGAGCAAGACTATGACTACCTAAATGACTGGGGCCCACGTTTCAAGAAACTTGCTGACATGTACGGTGGAGGTG
ATGACTGAACTTCAAAGTGAACTTTGTTTCTGGACAAGTACAAACATTTCAACTGATATTCCCCAAAAGCATACAGAAG
CTAGGCTTTAACTTTGTAGTCTACTAGCACAAGTGCTTGCTGAAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCC
GTGGAATATCAGTGATCCAATGCTGTTTGGAAAAAAATATTGAGCTCAGTTACACTTGAATTTTACAGTACAGAAGCAC
TGGGATTTTATGTGCCTTTTTGTACCTTTTTCAGATCGGAATTAGTTTTATGTTTAAGGCTTTAATGGTACTGATTTAT
GAAATGATGCATTAAAGAGACAAGATATGTTGGGGTGGGGAGGAGTAAGGTGAATCACAATGCGCTTCAATATGCTTTT
GTTACATCGCATTGCTTTTATTAAAATAAGGAGACTGAAAATT
CitationGarcía-Castro MI, Vielmetter E, Bronner-Fraser M. N-Cadherin, a cell adhesion molecule involved in establishment of embryonic left-right asymmetry. Science. 2000 May 12;288(5468):1047-51.
CopyrightCopyright © 2000, The American Association for the Advancement of Science
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001001615).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Primitive Streak
 
4-6
stage 4
stage 5
stage 5
stage 5
stage 6
Head Process
Hensen's Node
Primitive Streak
stage 5-

Entry 6

GEISHA IdCDH2.Hardy.2011Data SourcePublication
Complete cDNA Template Probeshow
TTTTTTAAAAAATTTGGCCACCATTGATTTCATGCAGGGACCCAAACTACTCAGAAGTTTTTAGCTAAAATTTCGGACC
GCAAACGTGGTAAAAATTGACCCTGTTAATGGACAAATAACACCACAGCGTGTTTTGGACAGAGAATCGATTATGTGCA
AAACAATATGTATAATGGCAACTTTTCTTGCCTCTGATAATGGATTCCTCCAATGAGTGGAACTGGTACACTTCAGATA
TACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAACACTGCAGCCTAATG
CTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTGCCTGATTCACCTCC
TAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGATCAGGTTCCTGGAG
GCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTCTGTGCTAAAAGTGA
AAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTGGGCACTGGTGCCAT
CATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGAAGCGCCGTGATAAG
GAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATATGATGAAGAAGGTG
GTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAAACCAGACGCCATCAAAACCTGT
TGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTGCTCCTCATCCCTGG
GGCATTGGGACCTTCCATTAATGAGGGACTTAAGCCGCGACCACGACCCCCTTACAGCCTCTACTTGGGGTAATTTTTT
AAAAAA
CitationHardy KM, Yatskievych TA, Konieczka J, Bobbs AS, Antin PB. FGF signalling through RAS/MAPK and PI3K pathways regulates cell movement and gene expression in the chicken primitive streak without affecting E-cadherin expression. BMC Dev Biol. 2011 Mar 21;11:20.
Copyright© 2011 Hardy et al; licensee BioMed Central Ltd.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4
stage 4
stage 4
Early Mesoderm
Epiblast
Head Process
Primitive Streak
medial mesoderm

Entry 7

GEISHA IdCDH2.Yan.2011Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTGAATTCTTGCATCAGGTTTGGAATG
GGACAGTTCCTGAAGGATCAAAGCCAGGAACCTATGTAATGACTGTTACTGCCATCGATGCTGATGATCCCAATGCACA
GAATGGGATGCTGAGATACAGAATCTTGTCACAGGCACCAAGCAGTCCCTCTCCCAACATGTTTACAATCAACAATGAG
ACTGGTGACATTATTACCGTAGCAGCTGGGCTCGACAGAGAGAAAGTACAACAGTATACATTAATAATTCAAGCTACGG
ACATGGAAGGAAACCCAACATATGGTCTTTCAAACACAGCAACTGCTGTCATCACTGTGACAGATGTCAATGACAATCC
TCCAGAGTTCACTGCTATGACTTTCTACGGTGAAGTACCAGAAAACAGAGTGGATGTCATAGTGGCTAACCTAACAGTA
ACAGATAAAGATCAGCCACACACGCCTGCGTGGAATGCGAGGTACCAAATGACAGGGGGAGACCCGACAGGCCAGTTTA
CTATCCTGACCGATCCAAATAGCAATGATGGGTTGGTAACTGTTGTCAAGCCCATTGACTTTGAGACCAACAGGATGTT
TGTACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTG
TCCATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTAC
TTGCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAA
ACTTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAA
TCGATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTG
GTACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAAC
ACTGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTG
CCTGATTCACCTCCTAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGA
TCAGGTTCCTGGAGGCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTC
TGTGCTAAAAGTGAAAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTG
GGCACTGGTGCCATCATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGA
AGCGCCGTGATAAGGAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATA
TGATGAAGAAGGTGGTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAGAACCAGAC
GCCATCAAACCTGTTGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTG
CTCCTCATCCTGGGGACATTGGGGACTTCATTAATGAGGGACTTAAAGCAGCCGACAACGACCCTACAGCCCCGCCATA
CGATTCCCTCTTAGTCTTTGACTATGAAGGAAGCGGCTCCACTGCTGGATCCTTGAGCTCTCTTAATTCCTCAAGTAGC
GGTGGTGAGCAAGACTATGACTACCTAAATGACTGGGGCCCACGTTTCAAGAAACTTGCTGACATGTACGGTGGAGGTG
ATGACTGAACTTCAAAGTGAACTTTGTTTCTGGACAAGTACAAACATTTCAACTGATATTCCCCAAAAGCATACAGAAG
CTAGGCTTTAACTTTGTAGTCTACTAGCACAAGTGCTTGCTGAAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCC
GTGGAATATCAGTGATCCAATGCTGTTTGGAAAAAAATATTGAGCTCAGTTACACTTGAATTTTACAGTACAGAAGCAC
TGGGATTTTATGTGCCTTTTTGTACCTTTTTCAGATCGGAATTAGTTTTATGTTTAAGGCTTTAATGGTACTGATTTAT
GAAATGATGCATTAAAGAGACAAGATATGTTGGGGTGGGGAGGAGTAAGGTGAATCACAATGCGCTTCAATATGCTTTT
GTTACATCGCATTGCTTTTATTAAAATAAGGAGACTGAAAATT
CitationYan X, Lin J, Rolfs A, Luo J. Differential expression of the ADAMs in developing chicken retina. Dev Growth Differ. 2011 Jun;53(5):726-39.
Copyrightcopyright 2011 The Authors
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001001615).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-35
stage 35
stage 35
Retina
 

Entry 8

GEISHA IdNCDH.Lin.2010Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTGAATTCTTGCATCAGGTTTGGAATG
GGACAGTTCCTGAAGGATCAAAGCCAGGAACCTATGTAATGACTGTTACTGCCATCGATGCTGATGATCCCAATGCACA
GAATGGGATGCTGAGATACAGAATCTTGTCACAGGCACCAAGCAGTCCCTCTCCCAACATGTTTACAATCAACAATGAG
ACTGGTGACATTATTACCGTAGCAGCTGGGCTCGACAGAGAGAAAGTACAACAGTATACATTAATAATTCAAGCTACGG
ACATGGAAGGAAACCCAACATATGGTCTTTCAAACACAGCAACTGCTGTCATCACTGTGACAGATGTCAATGACAATCC
TCCAGAGTTCACTGCTATGACTTTCTACGGTGAAGTACCAGAAAACAGAGTGGATGTCATAGTGGCTAACCTAACAGTA
ACAGATAAAGATCAGCCACACACGCCTGCGTGGAATGCGAGGTACCAAATGACAGGGGGAGACCCGACAGGCCAGTTTA
CTATCCTGACCGATCCAAATAGCAATGATGGGTTGGTAACTGTTGTCAAGCCCATTGACTTTGAGACCAACAGGATGTT
TGTACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTG
TCCATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTAC
TTGCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAA
ACTTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAA
TCGATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTG
GTACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAAC
ACTGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTG
CCTGATTCACCTCCTAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGA
TCAGGTTCCTGGAGGCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTC
TGTGCTAAAAGTGAAAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTG
GGCACTGGTGCCATCATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGA
AGCGCCGTGATAAGGAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATA
TGATGAAGAAGGTGGTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAGAACCAGAC
GCCATCAAACCTGTTGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTG
CTCCTCATCCTGGGGACATTGGGGACTTCATTAATGAGGGACTTAAAGCAGCCGACAACGACCCTACAGCCCCGCCATA
CGATTCCCTCTTAGTCTTTGACTATGAAGGAAGCGGCTCCACTGCTGGATCCTTGAGCTCTCTTAATTCCTCAAGTAGC
GGTGGTGAGCAAGACTATGACTACCTAAATGACTGGGGCCCACGTTTCAAGAAACTTGCTGACATGTACGGTGGAGGTG
ATGACTGAACTTCAAAGTGAACTTTGTTTCTGGACAAGTACAAACATTTCAACTGATATTCCCCAAAAGCATACAGAAG
CTAGGCTTTAACTTTGTAGTCTACTAGCACAAGTGCTTGCTGAAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCC
GTGGAATATCAGTGATCCAATGCTGTTTGGAAAAAAATATTGAGCTCAGTTACACTTGAATTTTACAGTACAGAAGCAC
TGGGATTTTATGTGCCTTTTTGTACCTTTTTCAGATCGGAATTAGTTTTATGTTTAAGGCTTTAATGGTACTGATTTAT
GAAATGATGCATTAAAGAGACAAGATATGTTGGGGTGGGGAGGAGTAAGGTGAATCACAATGCGCTTCAATATGCTTTT
GTTACATCGCATTGCTTTTATTAAAATAAGGAGACTGAAAATT
CitationLin J, Luo J, Redies C. Molecular characterization and expression analysis of ADAM12 during chicken embryonic development. Dev Growth Differ. 2010 Dec;52(9):757-69.
Copyright© 2010 The Authors. Journal compilation © 2010 Japanese Society of Developmental Biologists.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001001615).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 29
stage 29
Liver
Mesonephros
Myotome
Notochord
drg, dorsal root ganglion;rp, roof plate
31-35
stage 35
stage 35
Gizzard
Leg Muscles
od, oviduct

Entry 9

GEISHA IdCDH2.Bell.2004Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTGAATTCTTGCATCAGGTTTGGAATG
GGACAGTTCCTGAAGGATCAAAGCCAGGAACCTATGTAATGACTGTTACTGCCATCGATGCTGATGATCCCAATGCACA
GAATGGGATGCTGAGATACAGAATCTTGTCACAGGCACCAAGCAGTCCCTCTCCCAACATGTTTACAATCAACAATGAG
ACTGGTGACATTATTACCGTAGCAGCTGGGCTCGACAGAGAGAAAGTACAACAGTATACATTAATAATTCAAGCTACGG
ACATGGAAGGAAACCCAACATATGGTCTTTCAAACACAGCAACTGCTGTCATCACTGTGACAGATGTCAATGACAATCC
TCCAGAGTTCACTGCTATGACTTTCTACGGTGAAGTACCAGAAAACAGAGTGGATGTCATAGTGGCTAACCTAACAGTA
ACAGATAAAGATCAGCCACACACGCCTGCGTGGAATGCGAGGTACCAAATGACAGGGGGAGACCCGACAGGCCAGTTTA
CTATCCTGACCGATCCAAATAGCAATGATGGGTTGGTAACTGTTGTCAAGCCCATTGACTTTGAGACCAACAGGATGTT
TGTACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTG
TCCATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTAC
TTGCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAA
ACTTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAA
TCGATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTG
GTACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAAC
ACTGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTG
CCTGATTCACCTCCTAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGA
TCAGGTTCCTGGAGGCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTC
TGTGCTAAAAGTGAAAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTG
GGCACTGGTGCCATCATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGA
AGCGCCGTGATAAGGAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATA
TGATGAAGAAGGTGGTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAGAACCAGAC
GCCATCAAACCTGTTGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTG
CTCCTCATCCTGGGGACATTGGGGACTTCATTAATGAGGGACTTAAAGCAGCCGACAACGACCCTACAGCCCCGCCATA
CGATTCCCTCTTAGTCTTTGACTATGAAGGAAGCGGCTCCACTGCTGGATCCTTGAGCTCTCTTAATTCCTCAAGTAGC
GGTGGTGAGCAAGACTATGACTACCTAAATGACTGGGGCCCACGTTTCAAGAAACTTGCTGACATGTACGGTGGAGGTG
ATGACTGAACTTCAAAGTGAACTTTGTTTCTGGACAAGTACAAACATTTCAACTGATATTCCCCAAAAGCATACAGAAG
CTAGGCTTTAACTTTGTAGTCTACTAGCACAAGTGCTTGCTGAAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCC
GTGGAATATCAGTGATCCAATGCTGTTTGGAAAAAAATATTGAGCTCAGTTACACTTGAATTTTACAGTACAGAAGCAC
TGGGATTTTATGTGCCTTTTTGTACCTTTTTCAGATCGGAATTAGTTTTATGTTTAAGGCTTTAATGGTACTGATTTAT
GAAATGATGCATTAAAGAGACAAGATATGTTGGGGTGGGGAGGAGTAAGGTGAATCACAATGCGCTTCAATATGCTTTT
GTTACATCGCATTGCTTTTATTAAAATAAGGAGACTGAAAATT
CitationBell GW, Yatskievych TA, Antin PB. GEISHA, a whole-mount in situ hybridization gene expression screen in chicken embryos. Dev Dyn. 2004 Mar;229(3):677-87.
CopyrightCopyright © 2004 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe from Geisha I17. Sequence below was obtained from NCBI (Acc. # NM_001001615).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
Area Pellucida
Primitive Streak
 
7-12
stage 8
stage 8
stage 12
stage 12
Anterior Intestinal Portal
Heart
Primitive Streak
Somites
 

Entry 10

GEISHA IdN-CADHERIN.Dady.2012Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTGAATTCTTGCATCAGGTTTGGAATG
GGACAGTTCCTGAAGGATCAAAGCCAGGAACCTATGTAATGACTGTTACTGCCATCGATGCTGATGATCCCAATGCACA
GAATGGGATGCTGAGATACAGAATCTTGTCACAGGCACCAAGCAGTCCCTCTCCCAACATGTTTACAATCAACAATGAG
ACTGGTGACATTATTACCGTAGCAGCTGGGCTCGACAGAGAGAAAGTACAACAGTATACATTAATAATTCAAGCTACGG
ACATGGAAGGAAACCCAACATATGGTCTTTCAAACACAGCAACTGCTGTCATCACTGTGACAGATGTCAATGACAATCC
TCCAGAGTTCACTGCTATGACTTTCTACGGTGAAGTACCAGAAAACAGAGTGGATGTCATAGTGGCTAACCTAACAGTA
ACAGATAAAGATCAGCCACACACGCCTGCGTGGAATGCGAGGTACCAAATGACAGGGGGAGACCCGACAGGCCAGTTTA
CTATCCTGACCGATCCAAATAGCAATGATGGGTTGGTAACTGTTGTCAAGCCCATTGACTTTGAGACCAACAGGATGTT
TGTACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTG
TCCATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTAC
TTGCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAA
ACTTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAA
TCGATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTG
GTACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAAC
ACTGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTG
CCTGATTCACCTCCTAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGA
TCAGGTTCCTGGAGGCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTC
TGTGCTAAAAGTGAAAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTG
GGCACTGGTGCCATCATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGA
AGCGCCGTGATAAGGAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATA
TGATGAAGAAGGTGGTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAGAACCAGAC
GCCATCAAACCTGTTGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTG
CTCCTCATCCTGGGGACATTGGGGACTTCATTAATGAGGGACTTAAAGCAGCCGACAACGACCCTACAGCCCCGCCATA
CGATTCCCTCTTAGTCTTTGACTATGAAGGAAGCGGCTCCACTGCTGGATCCTTGAGCTCTCTTAATTCCTCAAGTAGC
GGTGGTGAGCAAGACTATGACTACCTAAATGACTGGGGCCCACGTTTCAAGAAACTTGCTGACATGTACGGTGGAGGTG
ATGACTGAACTTCAAAGTGAACTTTGTTTCTGGACAAGTACAAACATTTCAACTGATATTCCCCAAAAGCATACAGAAG
CTAGGCTTTAACTTTGTAGTCTACTAGCACAAGTGCTTGCTGAAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCC
GTGGAATATCAGTGATCCAATGCTGTTTGGAAAAAAATATTGAGCTCAGTTACACTTGAATTTTACAGTACAGAAGCAC
TGGGATTTTATGTGCCTTTTTGTACCTTTTTCAGATCGGAATTAGTTTTATGTTTAAGGCTTTAATGGTACTGATTTAT
GAAATGATGCATTAAAGAGACAAGATATGTTGGGGTGGGGAGGAGTAAGGTGAATCACAATGCGCTTCAATATGCTTTT
GTTACATCGCATTGCTTTTATTAAAATAAGGAGACTGAAAATT
CitationDady A, Blavet C, Duband JL Timing and kinetics of E- to N-cadherin switch during neurulation in the avian embryo DEVELOPMENTAL DYNAMICS. Volume 241, Issue 8, August 2012, Pages: 1333–1349.
CopyrightCopyright © 2012 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001001615.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
Early Mesoderm
Primitive Streak
 
7-12
stage 7
stage 7
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 10
stage 10
stage 10
stage 11
stage 11
Forebrain
Head Mesenchyme
Hindbrain
Mesencephalon
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
 
13-14
stage 14
stage 14
stage 14
stage 14
stage 14
stage 14
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
21 somites embryo
22 somites embryo

Entry 11

GEISHA IdNCADHERIN.Blackmore.2006Data SourcePublication
Complete cDNA Template Probeshow
GGGGGCCGCCCCGCCGCCGCCCCTCCTCGCCTCCATGTGCCGGATAGCGGGAACGCCGCCGCGGATCCTGCCGCCGCTG
GCGCTGATGCTGCTGGCGGCCCTGCAGCAGGCACCGATAAAAGCAACTTGTGAAGACATGTTGTGCAAGATGGGATTTC
CTGAAGATGTGCACAGTGCAGTCGTGTCGAGGAGTGTACATGGAGGACAACCTCTGCTCAATGTGAGGTTTCAAAGCTG
CGATGAAAACAGAAAAATATACTTTGGAAGCAGTGAGCCAGAAGATTTTAGAGTAGGTGAAGATGGTGTGGTATATGCA
GAGAGAAGCTTTCAACTTTCAGCAGAGCCCACGGAGTTTGTAGTGTCTGCTCGAGACAAGGAAACTCAGGAAGAATGGC
AAATGAAGGTGAAGCTAACCCCTGAACCAGCATTCACAGGGGCCTCAGAAAAGGACCAAAAGAAAATTGAAGACATCAT
ATTTCCATGGCAACAATATAAGGACAGCAGCCATCTGAAGAGACAGAAGAGAGACTGGGTTATCCCTCCAATCAACCTA
CCAGAAAATTCCAGAGGACCTTTTCCTCAAGAATTAGTTAGGATTCGGTCTGATCGTGATAAAAGCCTTTCGCTACGGT
ACAGTGTGACTGGCCCAGGAGCTGACCAACCTCCAACAGGAATCTTCATCATCAACCCCATCTCAGGACAGCTGTCTGT
GACAAAGCCTTTAGATCGGGAGCAGATTGCTTCTTTTCATCTGAGAGCACATGCAGTGGATGTAAATGGAAACCAGGTG
GAAAATCCTATTGATATTGTGATTAACGTCATTGATATGAATGATAACAGACCTGAATTCTTGCATCAGGTTTGGAATG
GGACAGTTCCTGAAGGATCAAAGCCAGGAACCTATGTAATGACTGTTACTGCCATCGATGCTGATGATCCCAATGCACA
GAATGGGATGCTGAGATACAGAATCTTGTCACAGGCACCAAGCAGTCCCTCTCCCAACATGTTTACAATCAACAATGAG
ACTGGTGACATTATTACCGTAGCAGCTGGGCTCGACAGAGAGAAAGTACAACAGTATACATTAATAATTCAAGCTACGG
ACATGGAAGGAAACCCAACATATGGTCTTTCAAACACAGCAACTGCTGTCATCACTGTGACAGATGTCAATGACAATCC
TCCAGAGTTCACTGCTATGACTTTCTACGGTGAAGTACCAGAAAACAGAGTGGATGTCATAGTGGCTAACCTAACAGTA
ACAGATAAAGATCAGCCACACACGCCTGCGTGGAATGCGAGGTACCAAATGACAGGGGGAGACCCGACAGGCCAGTTTA
CTATCCTGACCGATCCAAATAGCAATGATGGGTTGGTAACTGTTGTCAAGCCCATTGACTTTGAGACCAACAGGATGTT
TGTACTTACTGTAGCTGCAGAAAATCAAGTGCCTTTGGCTAAGGGGATTCAGCATCCTCCTCAGTCAACAGCAACCGTG
TCCATTACAGTCATTGATGTGAATGAGAGTCCATATTTTGTTCCAAACCCCAAGCTTGTACGTCAAGAAGAAGGGCTAC
TTGCTGGTAGCATGTTGACAACTTTCACTGCTCGGGACCCAGATCGTTACATGCAGCAAACCTCTCTAAGGTACTCAAA
ACTTTCGGACCCTGCAAACTGGCTAAAAATTGACCCTGTTAATGGACAAATAACAACCACAGCTGTTTTGGACAGAGAA
TCGATATATGTGCAAAACAATATGTATAATGCAACTTTTCTTGCCTCTGATAATGGAATTCCTCCAATGAGTGGAACTG
GTACACTTCAGATATACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAAC
ACTGCAGCCTAATGCTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTG
CCTGATTCACCTCCTAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGA
TCAGGTTCCTGGAGGCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTC
TGTGCTAAAAGTGAAAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTG
GGCACTGGTGCCATCATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGA
AGCGCCGTGATAAGGAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATA
TGATGAAGAAGGTGGTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAGAACCAGAC
GCCATCAAACCTGTTGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTG
CTCCTCATCCTGGGGACATTGGGGACTTCATTAATGAGGGACTTAAAGCAGCCGACAACGACCCTACAGCCCCGCCATA
CGATTCCCTCTTAGTCTTTGACTATGAAGGAAGCGGCTCCACTGCTGGATCCTTGAGCTCTCTTAATTCCTCAAGTAGC
GGTGGTGAGCAAGACTATGACTACCTAAATGACTGGGGCCCACGTTTCAAGAAACTTGCTGACATGTACGGTGGAGGTG
ATGACTGAACTTCAAAGTGAACTTTGTTTCTGGACAAGTACAAACATTTCAACTGATATTCCCCAAAAGCATACAGAAG
CTAGGCTTTAACTTTGTAGTCTACTAGCACAAGTGCTTGCTGAAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCC
GTGGAATATCAGTGATCCAATGCTGTTTGGAAAAAAATATTGAGCTCAGTTACACTTGAATTTTACAGTACAGAAGCAC
TGGGATTTTATGTGCCTTTTTGTACCTTTTTCAGATCGGAATTAGTTTTATGTTTAAGGCTTTAATGGTACTGATTTAT
GAAATGATGCATTAAAGAGACAAGATATGTTGGGGTGGGGAGGAGTAAGGTGAATCACAATGCGCTTCAATATGCTTTT
GTTACATCGCATTGCTTTTATTAAAATAAGGAGACTGAAAATT
CitationBlackmore M, Letourneau PC. L1, beta1 integrin, and cadherins mediate axonal regeneration in the embryonic spinal cord. J Neurobiol. 2006 Dec;66(14):1564-83.
Copyrightcopyright 2006 Wiley Periodicals, Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001001615.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-42
stage 35
stage 42
stage 42
Spinal Cord
 

Entry 12

GEISHA IdNCDH.Lin.2012BData SourcePublication
Complete cDNA Template Probeshow
TTTTTTAAAAAATTTGGCCACCATTGATTTCATGCAGGGACCCAAACTACTCAGAAGTTTTTAGCTAAAATTTCGGACC
GCAAACGTGGTAAAAATTGACCCTGTTAATGGACAAATAACACCACAGCGTGTTTTGGACAGAGAATCGATTATGTGCA
AAACAATATGTATAATGGCAACTTTTCTTGCCTCTGATAATGGATTCCTCCAATGAGTGGAACTGGTACACTTCAGATA
TACTTGCTGGACATCAATGATAATGCTCCCCAAGTGAACCCAAAAGAAGCCACCACCTGTGAAACACTGCAGCCTAATG
CTATTAACATCACTGCTGTAGACCCTGACATTGATCCAAATGCAGGCCCATTTGCCTTTGAGCTGCCTGATTCACCTCC
TAGTATTAAGAGGAATTGGACCATTGTTCGAATTAGTGGTGATCATGCCCAGCTCTCTTTAAGGATCAGGTTCCTGGAG
GCTGGTATCTATGATGTGCCCATAGTAATTACAGATTCTGGAAATCCACATGCATCTAGCACTTCTGTGCTAAAAGTGA
AAGTTTGCCAATGTGACATAAATGGGGACTGTACTGATGTTGACCGGATTGTTGGCGCAGGACTGGGCACTGGTGCCAT
CATTGCAATTCTGCTTTGTATCATCATCTTACTCATTTTAGTTTTGATGTTCGTAGTATGGATGAAGCGCCGTGATAAG
GAGCGTCAGGCCAAGCAGCTCTTAATTGATCCAGAAGATGATGTGAGGGACAACATTCTGAAATATGATGAAGAAGGTG
GTGGAGAAGAAGATCAGGATTATGACTTGAGCCAGCTCCAGCAGCCTGACACTGTAAACCAGACGCCATCAAAACCTGT
TGGAATCAGACGTCTTGATGAAAGGCCAATCCATGCAGAACCTCAGTATCCAGTCAGATCAGCTGCTCCTCATCCCTGG
GGCATTGGGACCTTCCATTAATGAGGGACTTAAGCCGCGACCACGACCCCCTTACAGCCTCTACTTGGGGTAATTTTTT
AAAAAA
CitationLin J, Redies C. Histological evidence: housekeeping genes beta-actin and GAPDH are of limited value for normalization of gene expression. Dev Genes Evol. 2012
Copyright© Springer-Verlag Berlin Heidelberg 2012
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_001001615).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-36
stage 36
stage 36
Heart
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.1917

Mouse

EmageMGI:88355
EurexpressMGI:88355
MGI GXDMGI:88355

Frog

Xenbase951658

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990415-171
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