GEISHA - A Chicken Embryo Gene Expression Database
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ARNT2
aryl hydrocarbon receptor nuclear translocator 2

Gene
Official SymbolARNT2
Official Full Namearyl hydrocarbon receptor nuclear translocator 2
CGNC ID4856
also known asaryl hydrocarbon receptor nuclear translocator 2|microRNA 5572
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_413854
PolypeptideXP_413854
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9915ENSG00000172379MIM:606036
Mouse11864ENSMUSG00000015709All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1) MGI:107188
Xenopus100101693, 380232487403
Zebrafish64277ZDB-GENE-001207-3ZFIN:ZDB-GENE-001207-3
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene415481
Ensembl Gene
KEGGgga:415481
GEISHA IdARNT2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTCAACCAGCCGCAGTCCG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGGACCGCCTTCAGCAAACCCcDNA Template Length1419
Forward cDNA Template Probeshow
ACCTTGGCTACCGCCTCGGTTGCTAGCTGGAGTGGCATTCCCCTTGGAGAAGAGGTGGCAGGGCTGGAAAGTGGGCTGT
ATGATGATGGATCTGCTGGGTAGGTGTGACTTGTTCCAATCCCAAAGGGAGATGACTGAGCCTTACCAGACTGAGATGG
AATTTGCTGTCCTGGAAATGGTGGGCGATTTCCTGTCCAGGCAACCTGACTCTGATTCAGCTGGCGAGATATCTGTGTC
AGATTCTGGCCTGTTGATGAAGAAGACTGGATGTCGTTCACACCAGGCACATGTACCACAGATGAACTGAAACTCTTTC
CTGAATGTCCTGGCTGAAATGGGCTTCCCTGTGAATACAGCTGCTGGTTTCCTGCTGTGGATGCTGAGGCCATCATTTT
TTTATCTGAAGCAGTTATTCCAGCAAACATCTCAGCAAATCTAGGATCTCGCTCCTGGGAGAAGATAGCATCCGGCTTT
TCCACAGACTTTCCACCCTCATGAACGTTGGCTGGTATACTTGGAACAGGCACCTGAGATAAATCATAGGATGACAGCC
CATCTCTTTGATGTACTTCAAGTTCTGCTTGCTGCTGCTGGAGCTGCTTTACATTAGTGTTGGTGCAGATGATGTATTC
AATCTCGTCGGAGTAAGGATTCTGAAAGGTGAAGCTGCTGGTTCTGATCAGCATCCATTCCCGGTTTTTGGTTCGAAAA
CGGTACATCACAGACAGGACTTGACCTTTCAGTTTCACAACCTGTTGGAAACTCTCTCTCAAATGGCTTTGATCTTCAG
GATGGCAGAATTCTAAAATGTCTTTCCCCAGAAGATCCTGGGGCTGGTAGCCCATGACGCTGATGCATCTGGGGTCAAC
AAGGTGATGACTCCGTCAGAGTGTGCCTTGACAAGAACTCAGTTGGGACTGACATGCCCTTCATGTCCATGCACCCCGG
AGAGCTGGTTACCTGAAGCCTCCCTATGCCCCCAGGCAGTATTTACTACCTTGTCCCACATCACCTCTTCTTCTGGTAA
ATTCTTCCTGCTGGTGGCCAGCCTTTGTGTACCCCGTGGAATGAAAACAACAACTGTGCTTCACCTTCTTTAAGGGCCC
AGGCATTCCGTATCTTTCCCCGGGGGGTATTCGTTCAAGAGTAGGATCCAAAGAACTTTCCCCCCCTCTCCCAAAAAAA
AGCTTTGGACCCAGCCCTTCCCTGAGAACCCGCCCCCTTTTACCTTTCCTCTCAAACGAGGATCCCCGCAAATTTCAAA
TACCCCCGCCCGCCTTTCCCGCCGGGGGAACGTTTAAGGACCGCACTTGGAGGCGGGGGAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Area Pellucida
Low level expression.
7-12
stage 7
stage 8
stage 9
stage 10
stage 11
Area Pellucida
Forebrain
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
 
13-18
stage 13
stage 18
Eye
Intermediate Mesoderm
Lateral Plate Mesoderm
Limb Buds
Neural Plate/Tube
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
Not Heart.
19-24
stage 22
stage 23
Widespread Expression
Not Heart
25
stage 25
Widespread Expression
Not Heart

Mouse

EmageMGI:107188
EurexpressMGI:107188
MGI GXDMGI:107188

Frog

Xenbase487403

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-001207-3
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