GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

FBXW11
F-box and WD repeat domain containing 11

Gene
Official SymbolFBXW11
Official Full NameF-box and WD repeat domain containing 11
CGNC ID50183
also known asF-box/WD repeat-containing protein 11|F-box and WD-40 domain protein 11
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001039262
PolypeptideNP_001034351
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4631
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human23291ENSG00000072803MIM:605651
Mouse103583ENSMUSG00000020271All phenotypic alleles (2):Targeted, other(2) MGI:2144023
Xenopus
Zebrafish406825, 334373ENSDARG00000017230, ENSDARG00000028543ZDB-GENE-040426-2903, ZDB-GENE-030131-6305ZFIN:ZDB-GENE-040426-2903, ZFIN:ZDB-GENE-030131-6305
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene416181
Ensembl GeneENSGALG00000002229
KEGGgga:416181

Entry 1

GEISHA IdBTRC.Aglyamova.2007Data SourcePublication
Complete cDNA Template Probeshow
TGCTCTATGCCCAGATCTCTGTGGCTGGGCTGCTCCAGCCTGGCGGACAGCATGCCCTCGCTGCGATGCCTGTATAACC
CAGGGACTGGCGCACTCCCAGCTTTCCAGAACTCCTCTGAGAGAGAAGACTGTAATAATGATGAGCCCCCTAGGAAGAT
CATTCCTGAGAAGAATTCACTTAGACAGACCTACAACAGCTGTGCCAGACTGTGCTTAAACCAGGAAACAGTATGTCTA
GGAAGCACGGCTATGAAGACTGAAAATTGTGTGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTATGATTGTGCCCA
AGCAGAGAAAACTGTCAGCAAGCTATGAGAAGGAGAAGGAGCTCTGTGTCAAGTACTTTGAGCAGTGGTCTGAGTCTGA
CCAGGTGGAGTTTGTGGAGCACCTCATCTCCCAGATGTGTCACTACCAGCACGGACATATAAACTCGTACCTCAAGCCC
ATGTTACAGAGGGACTTCATCACTGCACTGCCAGCTCGGGGATTGGATCACATTGCTGAGAACATTCTGTCCTACCTGG
ATGCCAAATCGCTGTGTGCCGCTGAGCTGGTGTGCAAGGAGTGGTACCGTGTGACGTCGGACGGCATGCTGTGGAAGAA
GCTGATCGAGAGGATGGTCAGGACAGACTCGCTGTGGAGGGGCTTGTCAGAGAGGAGAGGATGGGGACAATACCTATTT
AAAAATAAACCCCCTGATGGGACTGCTCCACCCAACTCATTCTACAGAGCACTTTACCCCAAAATTATACAGGATATTG
AGACAATAGAGTCAAACTGGCGGTGTGGAAGGCACAGTTTACAGAGAATCCACTGCCGGAGCGAGACAAGCAAAGGTGT
TTATTGTTTACAGTATGATGATCAGAAGATAGTCAGTGGCCTACGAGACAATACTATCAAGATCTGGGATAAAAATACA
TTAGAATGCAAGCGAATTCTCACTGGACACACGGGTTCTGTCCTGTGCCTGCAGTATGATGAGCGGGTGATCATCACTG
GATCTTCAGACTCGACTGTCAGGGTGTGGGACGTGAACGCGGGCGAGATGCTGAACACACTGATTCACCACTGTGAAGC
AGTACTGCACCTCCGCTTCAATAACGGCATGATGGTGACGTGCTCCAAAGACCGTTCCATTGCTGTGTGGGACATGGCT
TCACCAACAGACATCACCCTGCGGAGGGTGCTCGTAGGGCACCGTGCTGCTGTCAACGTAGTGGACTTTGATGACAAGT
ACATCGTATCAGCATCAGGTGACAGAACTATAAAGGTATGGAACACTAGTACCTGCGAATTTGTGCGCACCTTAAATGG
CCACAAACGAGGCATTGCATGTCTGCAGTACAGAGACAGGCTAGTAGTGAGCGGCTCTTCAGATAATACTATCAGGCTG
TGGGATATCGAGTGTGGGGCATGTTTGCGAGTACTGGAAGGCCACGAGGAGCTGGTGAGATGCATACGCTTTGATAACA
AGAGGATAGTCAGCGGGGCATATGATGGGAAAATTAAGGTATGGGATCTGGTGGCTGCTTTGGACCCCCGTGCTCCAGC
AGGGACCCTCTGCTTGCGAACCCTTGTGGAGCATTCTGGAAGAGTTTTTCGACTTCAGTTTGATGAGTTCCAGATTGTC
AGCAGCTCACACGATGACACCATCCTCATCTGGGATTTTCTGAATGACCCAGCTGCCCAAGCAGAATCCACTCGTTCCC
CGTCCAGAACATACACCTACATCTCAAGATAAATAACAGTACACTGTACCTCACACTCGCACAGGACTCATTTAAGCTG
CAGTATTTAAATTATCTGCCAATGCCAGGACAAAAGAACTATCCACGTAACCAATACTTGCTGAAGAGAGAGGCTCTCA
GACTTGTTTCTGGAACAAAGTTGGCATGCGGTTGATCTCAGACAGGGTCTACTCAGCGTGGCTGACTGCTAAAGTGCTG
CTATATCAGAAGATGACTTTTATCTTTCGTGAACTAATAACATTTTTAAACCTCCCCATCCCTTTCCTCCCTCGTCCCC
ATTTTCCTGTTCACTCCCCTTCCCTTTGCCCTGTTTGGTTTCCCTCCAAACCCAGTCACAGATGTCCTGTGAATATATT
TAAGATGTTGCCAGAA
CitationAglyamova GV, Agarwala S. Gene expression analysis of the hedgehog signaling cascade in the chick midbrain and spinal cord. Dev Dyn. 2007 May;236(5):1363-73
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421723).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
Isthmus/MHB
Midbrain
Neural Plate/Tube
 
19-24
stage 22
Midbrain
Neural Plate/Tube
Rostral Floor Plate
25-26
stage 26
Neural Plate/Tube
Rostral Floor Plate

Entry 2

GEISHA IdBTRC.Agarwala.2005Data SourcePublication
Complete cDNA Template Probeshow
TGCTCTATGCCCAGATCTCTGTGGCTGGGCTGCTCCAGCCTGGCGGACAGCATGCCCTCGCTGCGATGCCTGTATAACC
CAGGGACTGGCGCACTCCCAGCTTTCCAGAACTCCTCTGAGAGAGAAGACTGTAATAATGATGAGCCCCCTAGGAAGAT
CATTCCTGAGAAGAATTCACTTAGACAGACCTACAACAGCTGTGCCAGACTGTGCTTAAACCAGGAAACAGTATGTCTA
GGAAGCACGGCTATGAAGACTGAAAATTGTGTGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTATGATTGTGCCCA
AGCAGAGAAAACTGTCAGCAAGCTATGAGAAGGAGAAGGAGCTCTGTGTCAAGTACTTTGAGCAGTGGTCTGAGTCTGA
CCAGGTGGAGTTTGTGGAGCACCTCATCTCCCAGATGTGTCACTACCAGCACGGACATATAAACTCGTACCTCAAGCCC
ATGTTACAGAGGGACTTCATCACTGCACTGCCAGCTCGGGGATTGGATCACATTGCTGAGAACATTCTGTCCTACCTGG
ATGCCAAATCGCTGTGTGCCGCTGAGCTGGTGTGCAAGGAGTGGTACCGTGTGACGTCGGACGGCATGCTGTGGAAGAA
GCTGATCGAGAGGATGGTCAGGACAGACTCGCTGTGGAGGGGCTTGTCAGAGAGGAGAGGATGGGGACAATACCTATTT
AAAAATAAACCCCCTGATGGGACTGCTCCACCCAACTCATTCTACAGAGCACTTTACCCCAAAATTATACAGGATATTG
AGACAATAGAGTCAAACTGGCGGTGTGGAAGGCACAGTTTACAGAGAATCCACTGCCGGAGCGAGACAAGCAAAGGTGT
TTATTGTTTACAGTATGATGATCAGAAGATAGTCAGTGGCCTACGAGACAATACTATCAAGATCTGGGATAAAAATACA
TTAGAATGCAAGCGAATTCTCACTGGACACACGGGTTCTGTCCTGTGCCTGCAGTATGATGAGCGGGTGATCATCACTG
GATCTTCAGACTCGACTGTCAGGGTGTGGGACGTGAACGCGGGCGAGATGCTGAACACACTGATTCACCACTGTGAAGC
AGTACTGCACCTCCGCTTCAATAACGGCATGATGGTGACGTGCTCCAAAGACCGTTCCATTGCTGTGTGGGACATGGCT
TCACCAACAGACATCACCCTGCGGAGGGTGCTCGTAGGGCACCGTGCTGCTGTCAACGTAGTGGACTTTGATGACAAGT
ACATCGTATCAGCATCAGGTGACAGAACTATAAAGGTATGGAACACTAGTACCTGCGAATTTGTGCGCACCTTAAATGG
CCACAAACGAGGCATTGCATGTCTGCAGTACAGAGACAGGCTAGTAGTGAGCGGCTCTTCAGATAATACTATCAGGCTG
TGGGATATCGAGTGTGGGGCATGTTTGCGAGTACTGGAAGGCCACGAGGAGCTGGTGAGATGCATACGCTTTGATAACA
AGAGGATAGTCAGCGGGGCATATGATGGGAAAATTAAGGTATGGGATCTGGTGGCTGCTTTGGACCCCCGTGCTCCAGC
AGGGACCCTCTGCTTGCGAACCCTTGTGGAGCATTCTGGAAGAGTTTTTCGACTTCAGTTTGATGAGTTCCAGATTGTC
AGCAGCTCACACGATGACACCATCCTCATCTGGGATTTTCTGAATGACCCAGCTGCCCAAGCAGAATCCACTCGTTCCC
CGTCCAGAACATACACCTACATCTCAAGATAAATAACAGTACACTGTACCTCACACTCGCACAGGACTCATTTAAGCTG
CAGTATTTAAATTATCTGCCAATGCCAGGACAAAAGAACTATCCACGTAACCAATACTTGCTGAAGAGAGAGGCTCTCA
GACTTGTTTCTGGAACAAAGTTGGCATGCGGTTGATCTCAGACAGGGTCTACTCAGCGTGGCTGACTGCTAAAGTGCTG
CTATATCAGAAGATGACTTTTATCTTTCGTGAACTAATAACATTTTTAAACCTCCCCATCCCTTTCCTCCCTCGTCCCC
ATTTTCCTGTTCACTCCCCTTCCCTTTGCCCTGTTTGGTTTCCCTCCAAACCCAGTCACAGATGTCCTGTGAATATATT
TAAGATGTTGCCAGAA
CitationAgarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421723).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-26
stage 26
Midbrain
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4631

Mouse

EmageMGI:2144023
EurexpressMGI:2144023
MGI GXDMGI:2144023

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-2903, ZDB-GENE-030131-6305
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona