GEISHA - A Chicken Embryo Gene Expression Database
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NET1
neuroepithelial cell transforming 1

Gene
Official SymbolNET1
Official Full Nameneuroepithelial cell transforming 1
CGNC ID6397
also known asneuroepithelial cell-transforming gene 1 protein|neuroepithelial cell transforming gene 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001030648
PolypeptideNP_001025819
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.6009
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10276ENSG00000173848MIM:606450
Mouse56349ENSMUSG00000021215All phenotypic alleles (4):Targeted, other(4) MGI:1927138
Xenopus780346, 380067487219
Zebrafish493607ENSDARG00000032765ZDB-GENE-041121-18ZFIN:ZDB-GENE-041121-18
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene416693
Ensembl GeneENSGALG00000008437
KEGGgga:416693

Entry 1

GEISHA IdNET1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAACTGCTCCTGGAAGACCTG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTGGGATGGGTGGTGATAACCcDNA Template Length927
Forward cDNA Template Probeshow
CCAACACCTGGCAAAGAAGAAAGAAACGGTGGATTTCAGCTTTGGAGTGCACTTGCAGCACTGGATCTGACTGCAAGGG
AGGGACTCTGCCAGGCTCCAGGTGATGGCACAAACTTCTGCTTTAGAAGCCTCAACCACCACACGTGGAAATCTTTCCC
AAACCAAAAAGGTGTTCTTCAAAAATCTGCTGTGAAGTGGTCAAAATGCTGACTGACATTGTAAAGAGTGGGCTCAGAG
TGGTCCCTTTTGTAAAAACAGACTCCAGTTCAACAGTGTTAACTGTATACCAGTAGCTGCCATTACAACATAAAAAAAA
AAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 4
stage 6
Area Pellucida
Epiblast
Extraembryonic Mesoderm
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
 
7-12
stage 7
stage 9
stage 9
stage 9
stage 10
stage 10
stage 10
stage 11
stage 11
stage 12
stage 12
Amnion
Anterior Neuropore
Anterior/Second Heart Field
Ear/Otic Placode
Extraembryonic Mesoderm
Head Mesenchyme
Headfold
Heart Tube
Lateral Plate Mesoderm
Neural Crest
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
Spinal Cord
Dorsal view.
Ventral view.
13-18
stage 15
stage 16
stage 17
Amnion
Endocardium
Eye
Forebrain
Hindbrain
Leg AER
Lung
Midbrain
Notochord
Somites
Wing AER
 
19-24
stage 23
stage 24
stage 24
Anterior/Second Heart Field
Cranial Nerve
Endoderm
Forebrain
Gut
Hindbrain
Leg AER
Leg Mesenchyme
Lung
Nasal Placode/Nerve
Oral Pharynx
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Wing AER
Wing Mesenchyme
 
25
stage 25
Anterior/Second Heart Field
Endoderm
Forebrain
Heart
Hindbrain
Leg AER
Leg Mesenchyme
Midbrain
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Widespread Expression
Wing AER
Wing Mesenchyme
 

Entry 2

GEISHA IdNET1.Nakaya.2008Data SourcePublication
Complete cDNA Template Probeshow
TGGGAGGCAGGGTTGGAGGCGACCGAGAGGATACTGCATGTGGTAGAAAGCATAGAGAAAAGAAAGCATAGAGAAAAGA
AAGCAGCTGAAGCTGATGAGTTCAGGACAGAAGAGGTAGCGACTGTATATAGCTGTATAACGGCGGCACTGCCATGTTC
TACAGTGATCCAAAGATTCCCGTGAGATGCCAGCTTGGAACCTGCGCTGCAAAGTGCTGTAGGAAACAAAGTGCTGACA
GTTCTGATCAAAGCCAAAACGTTGTTTCTGCAGCATGGCTGAAGGTGACAGGGTGAGGACGGCAATCCCACAACACCAT
CCACCATGACACCAACCCGGGAGCCGTAACTCGCAGGTGAAGTTCTGCCTGTTGGCTGTCGGTCGTGTTGGAAATGGGA
AGAGGGTGCACACAGACACAAACCCGCACGGTTCTCTGTTAATGTCTTTGTACAGTTTCAAGTGCCAAGTACAATTAAA
TTCCTGACGGCAAAAAAAAAAAAAAAA
CitationNakaya Y, Sukowati EW, Wu Y, Sheng G. RhoA and microtubule dynamics control cell-basement membrane interaction in EMT during gastrulation. Nat Cell Biol. 2008 Jul;10(7):765-75.
Copyright© 2008 Macmillan Publishers Limited. All rights reserved.
CommentsThe sequence below was obtained from NCBI (acc # NM_001030648.1 - Showing the last 0.5 kb of chick Net1 region from base 2587 to 3087) using the information provided in the publication.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
stage 1
stage 3
Epiblast
 
4-6
stage 4
stage 4
stage 4
stage 5
stage 5
Area Pellucida
Early Mesoderm
Epiblast
 
7-8
stage 7
stage 7
stage 8
stage 8
stage 8
stage 8
Ectoderm
Epiblast
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.6009

Mouse

EmageMGI:1927138
EurexpressMGI:1927138
MGI GXDMGI:1927138

Frog

Xenbase487219

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041121-18
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