GEISHA - A Chicken Embryo Gene Expression Database
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HLF
HLF, PAR bZIP transcription factor

Gene
Official SymbolHLF
Official Full NameHLF, PAR bZIP transcription factor
CGNC ID2216
also known ashepatic leukemia factor
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNAXM_415649
PolypeptideXP_415649
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly45588FBgn0016694
Human3131ENSG00000108924MIM:142385
Mouse217082ENSMUSG00000003949All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:96108
Xenopus100489797955697
Zebrafish768192, 557886ENSDARG00000061011ZDB-GENE-061013-159, ZDB-GENE-110420-3ZFIN:ZDB-GENE-061013-159, ZFIN:ZDB-GENE-110420-3
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene417395
Ensembl Gene
KEGGgga:417395

Entry 1

GEISHA IdChEST485a9Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGAGGGAAAGCCCACCATGTCGCGGCCGCTCCCGCTGAACCCCACCTTCCTACCTCCCACCTACGGGGTGCTGAAGTCC
CTGCTGGAAAACCCGCTCAAGCTGCCGCTCGCTCACGAAGACGCATTTGGTAAAGAAAAAGACAAAGAGAAGAAGTTAG
AGGATGACAGCACCAGTACCACAGTCCCTCAGTCTGCTTTCTTGGGCCCGACATTATGGGACAAGACGCTGCCATACGA
TGGAGACACTTTCCAGTTGGAATACATGGACCTGGAAGAGTTCCTCTCAGAAAATGGCATTCCACCCAGCCCAAACCAG
CACGTAGGATGGTTTCCCTTCCCAACAGGAGTTTTAATGTCTTTAACAACAAAAAAAAAAAAAAAAAGAAAAAAAAAAA
GAAAAAGACACGTTCATGTGAGCAATGTGAGCATGCTAATTGTATCCCTGCTACAGGGGGCGCATGTACAAGAAGCAGG
ATAATTAGCTGAAACGACAAATTAATGGCATCAAATCAGATCTGGCATTGGAATCAGAGGGGCTTTTCCGTTCTCAGTT
AGTTATGCATTTCTTCGAGCTCCATTTTGTGATTAAAAATTAAATGACCCGAATTCAGTTGTTTTTTTTCCCACGTTGT
GTAATATATTTTCTGTGGATTATATCTTGCTGTTATAAAAATCACTTTAATTCAGTTAGAAGAAGTCACTGGTTTGCAA
AGCCCATTTCTCCTAGTGGTTGTTGTTCTGAGTGTGACATGAACTGATGGTTCTGAATTCTGTTGTTTTAAACTCTCTC
TTTTGCTTTGAACAC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
Amnion
 
19-23
stage 21
stage 23
Amnion
 

Entry 2

GEISHA IdHLF.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCGAAGGGTGCCACATTTTTACC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGCCAACCAACAGCCTCCTAAGCcDNA Template Length1450
Forward cDNA Template Probeshow
TTCCTTTCGGTCAATAATGGGGAGGAATATATATCTTTGGCTATATATTTTAAACATGGAATAGCTTTTTCTCTTTGGT
TATATATAATATATGTCTTTCAAAATACACTGTCAGTATTTGTACTTGAAAAATACTGTACAAAACAAACATACTATAA
TTATTCTGTATAAACTTTATACATTTTATAATATCTGTTCTTTTGGTCTATAGTAAACACTTAGATTGATTGGATTAAC
CACAGTATACGACAACACCATCCCCCTCTGAAATACACCAGTGTCTCTTACATTCATTTCTCAGAAGTCCACTTTAGAT
TCGAACATAAGTGTTCAAAAGCAAAGAGAGAGTTTAAAACAACAGAATTCAGAACCATCAGTTCATGTCACACTCAGAA
CAACAACCACTAGGAGAAATGGGCTTTGCAAACCAGTGACTTCTTCTAACTGAATTAAAGTGATTTTTATAACAGCAAG
ATATAATCCACAGAAAATATATTACACAACGTGGGAAAAAAAACAACTGAATTCGGGTCATTTAATTTTTAATCACAAA
ATGGAGCTCGAAGAAATGCATAACTAACTGAGAACGGAAAAGCCCCTCTGATTCCAATGCCAGATCTGATTTGATGCCA
TTAATTTGTCGTTTCAGCTAATTATCCTGCTTCTTGTACATGCGCCCCCTGTAGCAGGGATACAATTAGCATGCTCACA
TTGCTCACATGAACGTGTCTTTTTCCTTTTTTTTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 8
stage 9
stage 9
stage 11
Blood Vessels
Early Mesoderm
Extraembryonic Mesoderm
Headfold
Heart
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
Somites
low level expression
13-18
stage 13
stage 14
stage 15
stage 15
Extraembryonic
Eye
Forebrain
Heart
Hindbrain
Intermediate Mesoderm
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Low level expression
19-24
stage 21
stage 24
Extraembryonic
Eye
Forebrain
Heart
Hindbrain
Midbrain
Notochord
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
 

Mouse

EmageMGI:96108
MGI GXDMGI:96108

Frog

Xenbase955697

Fruit Fly

BDGPFBgn0016694

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-061013-159, ZDB-GENE-110420-3
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