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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
	Multiple Parameters

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LRIG3
leucine rich repeats and immunoglobulin like domains 3

Gene

Official Symbol	LRIG3
Official Full Name	leucine rich repeats and immunoglobulin like domains 3
BirdBase ID	BB-GG13894
CGNC ID	7415
also known as	leucine-rich repeats and immunoglobulin-like domains protein 3
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001199555
Polypeptide	NP_001186484
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.15876

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	36788			FBgn0034083
Human	121227	ENSG00000139263		MIM:608870
Mouse	320398	ENSMUSG00000020105	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(1) Gene trapped(1)	MGI:2443955
Xenopus	100151727, 100037017			1219308
Zebrafish	564554		ZDB-GENE-130530-866	ZFIN:ZDB-GENE-130530-866

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	417813
Ensembl Gene
KEGG	gga:417813

GEISHA Id	LRIG3.Abraira.2010	Data Source	Publication
Complete cDNA Template Probe	show GGCGCTCGGGGCTCCCCAGGCCGGGCGGGGGCGGGCTGAGGCGCTGCAAAGTTTGCAGAGTGGCTGGCGGTGCCTTGTG CCCCCCATCACCGCTCCTTCCCTTCACTTTTTTTTTCTTCCTCCCGCTCCCCTCACCGCCTTCCCTCCTTGGCGGTGGC TCCGGGGCATGAGCGGGAACCACCACCCGCGCTGAAGGAGCTAGAGAGAGAGAGAGAGAGAGGCGCGGAGGGTCTATCT GTCCGCGAAGCAGCGCGAGGGACGCGGGTAGCGGCTCCGAACCCGCCATGCCCCGCGTCGCGTCCGCCGCCCTCCCGGC GCTACTCCTGCTGCTGCTAGGGGGCCCTGCCGCCGCCCGCTGCCCCGTGTCCTGCCGCTGCGCCGGGCACCTCGTCGCC TGCAGCCGCCTGGAGCCGAGCCGACTGCCCGAGCGGCTGCCGCGGGGGGCGGTGCAGCTGGATCTCAGTCACAACAAAT TATCTTCAATCAAGGCCAATTTCTTGGATCACCTTCATAGTCTTCGGGAAGTGAAGTTGAACAACAATGATCTGGAGAT CATTCCAAATCTGGGACCAGTCTCTGCAAATATAACTCTTCTGTCTTTGACAAGTAATAAGATTGCCAACATCTTATCT GAACATCTGAAGCCATTTCAGAGTTTAGAAACTTTGGATTTGAGCAACAACAACATATCAGAGCTAAAAATGTCATCAT TTCCTTCTTTACAGCTCAAGTATCTGTACATTAACAGTAACCGAATAACCTCCATGGAGCCTGGTACCTTTGACAATTT GTCTACCACACTTCAAGTATTGAAACTGAACAGGAACAAAATTTCAGCAATCCCTCAAAAGATGTTTAAACTTTCCCAT CTGCAGCACCTGGAATTGAATCGCAACAAAATTAAAAAAATAGATGGGCTTACTTTCCAAGGACTTCCAGCTTTGAAGT CATTAAAACTACAGAGAAACGGGATTACTAGGCTCATGGATGGTGCATTCTGGGGATTAACCAACATGGAAGTTTTGCA GCTGGACCATAACAACTTAACAGAGGTAACCAAAGGCTGGCTTTATGGCTTGCTGATGCTGCAGCAGCTCCATCTCAGC CAAAATGCCATCAGCAGGATCAGTCCTGACGCCTGGGAATTTTGCCAAAAACTCAGTGAGCTAGATTTGACGTTCAATC ACTTAGCAAGGTTAGATGATTCAAGCTTTGCTGGCTTAAGCGTGCTAGTTGGACTGTACATTGGAAGCAACAAAGTAAA CTACATTGCTGATTGTGCCTTCCGGGGACTTTCTAGTCTGCAGACTTTGGATCTGAAAAACAATGAAATATCGTGGACT ATTGAAGATATGAATGGTGCCTTCTCTGGTCTGGATAAACTTAGGAATCTGATACTGCAAGGAAACAGAATTAGATCCA TTACAAAGAAAGCATTTTCTGGCTTGGATGCACTTGAACACCTGGATCTAAGTAATAATGCAATTATGTCAGTTCAAGG AAATGCTTTTTCACAAATGAAGAAACTCAAAGAATTGCACTTAAACACATCAAGTCTCTTGTGTGACTGTCAGTTAAAG TGGCTACCACAATGGGTGTCAGAGAACAACTTTCAGAACTTTGTAAACGCCAGTTGTGCACATCCTCAACTACTAAAAG GGAGAAGTATTTTTGCTGTCAGCCTAGATGCATTTGTCTGTGACGATTTTCCTAAGCCACAGATCACTGTCCAGCCAGA AACCCAGTCAGCAATTAAAGGCTCCAACTTGAGTTTTGTATGTTCGGCAGCCAGCAGCAGTGATTCCCCAATGACCTTT GCGTGGAAGAAAGACAATGAATTACTGCATGATGCTGAAATGGAGAATTATGCACACCTCCGGGCGCAAGGCGGTGAAG TGATGGAGTATACCACCATCCTTCGACTGCGCAATGTTGAATTCAGCAGTGAAGGGAAATACCAGTGTGTAATTTCAAA TCACTTCGGTTCATCCTACTCTATTAAAGCCAAACTTACAGTAAACATGCTGCCTTCATTTACGAAGATTCCTATGGAC TTAACCATTCGTGCTGGGGCAATGGCACGTTTGGAATGTGCTGCAGTTGGGCATCCTGTCCCACAGATTGCTTGGCAGA AAGATGGTGGAACAGATTTTCCAGCAGCACGCAAGAGGCGTATGCATGTCATGCCTGAAGATGATGTATTCTTTATTGT TGATGTAAAAATTGAGGACACAGGCGTTTATAGCTGTACAGCTCAAAATACTGCTGGAAGCATTTCGGCTAACGCAACA TTAACAGTTCTAGAAACACCATCATTTTTGCGGCCTTTGCTGGATCGAACTGTAACAAAAGGTGAAACTGCAGTCTTAC AGTGCATTGCTGGTGGTAGCCCTCCACCCCGACTGAACTGGACTAAGGATGACAGCCCTCTCGTGGTAACAGAAAGACA TTTCTTTGCTGCAAGCAATCAGTTATTAATTATTGTGGATACAGATGTAGAAGATGCTGGGAAGTACACTTGTGAAATG TCTAATACACTTGGAACAGAACGAGGCAACATTCGTCTTAATGTAATTCCTACTCCCACCTGTGATTCTCCTCAAAACA TTACTCCAGCACTTGATGATGATGGATGGGCCACAGTTGGCATTGTCATCATAGCTGTGGTTTGCTGTGTGGTGGGCAC TTCCTTAGTGTGGGTGGTCATCATCTACCACACTAGAAGGAGAAATGAAGATTGCAGCATCACAAATACAGATGAAACA AATTTGCCTGCTGACATTCCAAGTTACCTGTCATCCCAGGGCACGCTGGCTGAAAGGCAGGATGGATATGGTTCATCTG AGAATGGTAGTCATCATCAGTTCCTCACATCTTCTGTGGGAGGGTATTTCTTACAGCAGAGGGACAGTAATGGCATTTG CCACCTAGATAATGGCAGTGAAACAGACTTGGATGGTGTTGCAGATCCATTTCTATGCCACTACCTGGGAACTTCAGGG ACTATGTATTTAAAAGGAAACACATACAGCTCTGAGACCTTTGAAGCATGCAGCCCAAGTTGCAGCCCTGACCAAAGAA CAGCAAGCCTGGATCCTTATGAGTCTGGATATTTAAAGAAAAAGGAATGCTGTCAGTACTCACCTCCACTGGAAGATCC TTTTGACCAATGCATTGGCGTTATTGGGATGCAGGCTACAGGCAGCAAGTTGATTAACTCCATTTATACTCAAAATGAA GGAACTGGACTAAAAAGCAGAAGTCTGAACTCAGACAAGCTTGATTTAAACAGAAGTTTGGAACCCTCATCTATTATCA GTAACAGCACTTTCATGGGAACGTTTGGAAAGCCTGTATGGAGGCCTCAGCTGGACTCCCTTTCAGGTCGTAGGCAGCC AGCAGCAAGTTGTCAACCGAAAACCTCCCATAATAATCCTCATTCCTCATTGGACTTTGATCCAGAAGCAGATGAAGAT GGAAGGGAAAGGACAGTTTCTAGAGGACAAAATAGCATTTACAATTACAAACAGTCCTTTGAAAACTTCAGAACTTTTA ACTTTCAATCCTGTGATTTGGATACATAGTTCTTTTTGGACCTGCCATTGATTTCTGGAACCAAAGAGATACTTGGACA TGCTACTACCTCAGTGTGGAATTTTATTTAAAAAGAGGGAATAAGGAAAGGAAGAAGGGAAGGAAGAAATCATATGATG CTATGAATTCAGAACAAATAAATGCATTTTTATTCAAATAAAACATAATTGCCAAAATGCTCTAAGTTTTTATACAGGG AAAACATTCCTTATAAAAGTACTATATTTCTAATTATTTTATAGCTTTGTTTTATGCAAATAATATCTTTTGTAAATTA ATGGTGTAAATAATACAGCATATGTATTTCTATGTCAGACTTCATTTTATTGAAATGAGTAGTAAGCATTCTAATTTTG TACTGTTACTTGTATCTTTTTTACAAATGGAAACTCTGTGCTGTTTGCAGGTATCATGCATCTTATTTGCACATTACTT TTAATAAACTATGCTGCCATGTGGTCTCTGACCCACATTAATGT
Citation	Abraira VE, Satoh T, Fekete DM, Goodrich LV. Vertebrate Lrig3-ErbB interactions occur in vitro but are unlikely to play a role in Lrig3-dependent inner ear morphogenesis. Dev Biol. 2010 Apr 15;340(2):595-604. Epub 2010 Feb 18.
Copyright	Copyright Abraira et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI. (acc # NM_001199555.1)

Stage

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Location (click to highlight)

Comments (click to highlight)

25-29

stage 26

stage 29

stage 29

Ear/Otic Placode

Data from NCBI Unigene EST Profile
Unigene ID: Gga.15876

Mouse

Emage	MGI:2443955
Eurexpress	MGI:2443955
MGI GXD	MGI:2443955

Frog

Xenbase

Fruit Fly

BDGP	FBgn0034083

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-130530-866

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