GEISHA - A Chicken Embryo Gene Expression Database
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CNOT2
CCR4-NOT transcription complex subunit 2

Gene
Official SymbolCNOT2
Official Full NameCCR4-NOT transcription complex subunit 2
CGNC ID7634
also known asCCR4-NOT transcription complex subunit 2, Not2, CCR4-NOT transcription complex, subunit 2
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001012808
PolypeptideNP_001012826
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.50456
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly40683FBgn0017550
Human4848ENSG00000111596MIM:604909
Mouse72068ENSMUSG00000020166All phenotypic alleles (2):Targeted, other(2) MGI:1919318
Xenopus100127821, 443622991719
Zebrafish100037372ENSDARG00000061802ZDB-GENE-070410-70ZFIN:ZDB-GENE-070410-70
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene417851
Ensembl GeneENSGALG00000010042
KEGGgga:417851

Entry 1

GEISHA IdNot2.Chapman.2008Data SourceDirect Submission
Complete cDNA Template Probeshow
GTTGCTCCCCCAGCATCCTCCGTGCTGGATACTCAGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGGTGACAAA
CAGCATGTTTGGTGCTTCAAGGAAGAAGTTTGTAGAGGGGGTTGATGGTGACTACCATGATGAAAACATGTACTACAGC
CAATCATCGATGTTCCCACATCGGTCAGAAAAAGATATGCTGGCATCACCGTCAACATCAGGTCAGCTGTCTCAGTTTG
GGGCAAGTTTATACGGGCAACAAAGTGCACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCG
CAGCTTATCACAAGGCACTCAGTTACCGAGCCACGTAACGCCAACAACAGGGGTACCAACAATGTCACTTCACACGCCT
CCATCTCCGAGCAGGGGGATATTGCCTATGAATCCTAGGAATATGATGAACCACTCCCAGGTTGGTCAGGGCATTGGAA
TTCCCAGCAGGACAAACAGCATGAGCAGTTCAGGGTTAGGCAGCCCCAACAGAAGCTCTCCAAGCATAATATGTATGCC
AAAGCAGCAACCCTCTCGACAACCTTTTACTGTGAACAGTATGTCTGGATTTGGGATGAACAGAAATCAGGCATTTGGA
ATGAATAACTCCTTATCAAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGACTGGACCTCTCAGATT
TTCCAGCACTAGCAGACAGAAACAGAAGGGAAGGAAGTGGCAATCCAACTCCATTAATAAACCCTTTAGCTGGAAGGGC
TCCCTATGTTGGGATGGTAACAAAACCAGCAAGTGAGCAGTCCCAGGACTTTTCAATACACAATGAAGATTTTCCAGCA
TTACCAGGTTCCAGCTACAAAGACCCAACATCAAGTAATGATGATAATAAATCTAATTTGAATACATCAGGCAAAACAT
CATCCAGCACAGATGGGCCCAAGTTTCCTGGAGATAAAAGTTCAACTACGCAAAACAACAACCAGCAGAAAAAAGGGAT
CCAGGTGTTACCTGATGGTCGGGTTACCAACATTCCTCAAGGGATGGTGACGGACCAGTTTGGAATGATTGGCTTGTTA
ACATTCATCAGGGCAGCAGAGACAGATCCAGGAATGGTACATCTTGCATTAGGAAGTGATTTAACAACACTAGGTCTCA
ATCTCAACTCTCCTGAAAATCTTTATCCCAAATTTGCATCACCTTGGGCATCGTCACCTTGTCGACCTCAAGACATAGA
CTTCCATGTTCCATCTGAATACTTAACTAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTCGGCCGATATGGA
GAAGATCTCCTGTTTTATCTCTATTACATGAATGGAGGAGATGTATTACAGCTATTAGCGGCAGTAGAGCTATTTAACC
GGGATTGGAGATACCACAAAGAAGAACGAGTATGGATCACCAGGGCACCCGGAATGGAGCCAACAATGAAAACCAATAC
ATACGAGAGGGGAACATATTACTTCTTTGACTGTCTTAACTGGAGGAAAGTAGCTAAGGAGTTCCATCTGGAATATGAC
AAATTAGAAGAAAGGCCTCATCTGCCATCAACCTTCAACTACAACCCTGCTCAGCAAGCCTTCTAAAGACTTCCCTTTT
CTTGGGGTATGGCTGTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCATCCTGGTTTTAATTCC
TTGAGGATCTGGCAATTGGCTCATGCGAAGGGTCACCATTTGAGGTCCTGCCTTACTAATTATGTGCTGCCCAACAACT
AAATTTGTAATTGTTTTTCTTTAGTTTGAGCAGGGTCTGAATTTTTGTTTTTGTTTTATTTTTGCCAGCAGACAAGCTT
GGGTCTGTAAAGACAAGCGAGTACACTGACAAAAGTTTACCACTTAGTTTTCCAAAATGTAAAAAGACAAAAAATAAGA
AAAAAGACAAAAAATTAGACAACAAAATTTGCATTGTTCATTGTAGCACTATTGGTAATAAAAAATGTTTGTGCATTTT
TATGTGAAGATCCTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTTTGCTTCCTTCATTTTACTTCCCCTTCTGTTTT
TGAAAGGCAGTTTTCGCCAAGCTTAATGCAAGAATATCTGACTGTTTAGAAGAAAGATATTGCCACAGTCTCTGGTTAG
TTTCCAGAGTTGTGTATTACTGAGCTTCATCTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAA
TAAATGTGTACATTTTTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGTATATATTATATA
TATGACATCTATTTTGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGCATGGATGCAATATATGAAAAC
GGGACATTCTGGAACTGCTGGTCAGGGGACTACTTTGTCGCCCTGTGCACTAAAGGGCCAGATTTTCAGCAGCCAAGGA
CATCCATACCCAAGTGAATGTGATGGGACTTAAGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCA
TAGGAAGAAAAAAAAAAGATCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAAGC
TCTCCTCACAAAAAAAAAAAAAAAA
CommentsImages Provided by Susan Chapman
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
stage 3
Area Pellucida
Hensen's Node
 
4-6
stage 4
stage 4
stage 4
stage 5
stage 6
Head Process
Hensen's Node
Notochord
 
7-12
stage 7
stage 8
stage 8
stage 9
stage 10
Diencephalon
Head Process
Hensen's Node
Notochord
 
13-17
stage 17
Notochord
Pineal Gland
Tail
 

Entry 2

GEISHA IdCNOT2.Stein.1996Data SourcePublication
Complete cDNA Template Probeshow
GTTGCTCCCCCAGCATCCTCCGTGCTGGATACTCAGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGGTGACAAA
CAGCATGTTTGGTGCTTCAAGGAAGAAGTTTGTAGAGGGGGTTGATGGTGACTACCATGATGAAAACATGTACTACAGC
CAATCATCGATGTTCCCACATCGGTCAGAAAAAGATATGCTGGCATCACCGTCAACATCAGGTCAGCTGTCTCAGTTTG
GGGCAAGTTTATACGGGCAACAAAGTGCACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCG
CAGCTTATCACAAGGCACTCAGTTACCGAGCCACGTAACGCCAACAACAGGGGTACCAACAATGTCACTTCACACGCCT
CCATCTCCGAGCAGGGGGATATTGCCTATGAATCCTAGGAATATGATGAACCACTCCCAGGTTGGTCAGGGCATTGGAA
TTCCCAGCAGGACAAACAGCATGAGCAGTTCAGGGTTAGGCAGCCCCAACAGAAGCTCTCCAAGCATAATATGTATGCC
AAAGCAGCAACCCTCTCGACAACCTTTTACTGTGAACAGTATGTCTGGATTTGGGATGAACAGAAATCAGGCATTTGGA
ATGAATAACTCCTTATCAAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGACTGGACCTCTCAGATT
TTCCAGCACTAGCAGACAGAAACAGAAGGGAAGGAAGTGGCAATCCAACTCCATTAATAAACCCTTTAGCTGGAAGGGC
TCCCTATGTTGGGATGGTAACAAAACCAGCAAGTGAGCAGTCCCAGGACTTTTCAATACACAATGAAGATTTTCCAGCA
TTACCAGGTTCCAGCTACAAAGACCCAACATCAAGTAATGATGATAATAAATCTAATTTGAATACATCAGGCAAAACAT
CATCCAGCACAGATGGGCCCAAGTTTCCTGGAGATAAAAGTTCAACTACGCAAAACAACAACCAGCAGAAAAAAGGGAT
CCAGGTGTTACCTGATGGTCGGGTTACCAACATTCCTCAAGGGATGGTGACGGACCAGTTTGGAATGATTGGCTTGTTA
ACATTCATCAGGGCAGCAGAGACAGATCCAGGAATGGTACATCTTGCATTAGGAAGTGATTTAACAACACTAGGTCTCA
ATCTCAACTCTCCTGAAAATCTTTATCCCAAATTTGCATCACCTTGGGCATCGTCACCTTGTCGACCTCAAGACATAGA
CTTCCATGTTCCATCTGAATACTTAACTAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTCGGCCGATATGGA
GAAGATCTCCTGTTTTATCTCTATTACATGAATGGAGGAGATGTATTACAGCTATTAGCGGCAGTAGAGCTATTTAACC
GGGATTGGAGATACCACAAAGAAGAACGAGTATGGATCACCAGGGCACCCGGAATGGAGCCAACAATGAAAACCAATAC
ATACGAGAGGGGAACATATTACTTCTTTGACTGTCTTAACTGGAGGAAAGTAGCTAAGGAGTTCCATCTGGAATATGAC
AAATTAGAAGAAAGGCCTCATCTGCCATCAACCTTCAACTACAACCCTGCTCAGCAAGCCTTCTAAAGACTTCCCTTTT
CTTGGGGTATGGCTGTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCATCCTGGTTTTAATTCC
TTGAGGATCTGGCAATTGGCTCATGCGAAGGGTCACCATTTGAGGTCCTGCCTTACTAATTATGTGCTGCCCAACAACT
AAATTTGTAATTGTTTTTCTTTAGTTTGAGCAGGGTCTGAATTTTTGTTTTTGTTTTATTTTTGCCAGCAGACAAGCTT
GGGTCTGTAAAGACAAGCGAGTACACTGACAAAAGTTTACCACTTAGTTTTCCAAAATGTAAAAAGACAAAAAATAAGA
AAAAAGACAAAAAATTAGACAACAAAATTTGCATTGTTCATTGTAGCACTATTGGTAATAAAAAATGTTTGTGCATTTT
TATGTGAAGATCCTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTTTGCTTCCTTCATTTTACTTCCCCTTCTGTTTT
TGAAAGGCAGTTTTCGCCAAGCTTAATGCAAGAATATCTGACTGTTTAGAAGAAAGATATTGCCACAGTCTCTGGTTAG
TTTCCAGAGTTGTGTATTACTGAGCTTCATCTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAA
TAAATGTGTACATTTTTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGTATATATTATATA
TATGACATCTATTTTGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGCATGGATGCAATATATGAAAAC
GGGACATTCTGGAACTGCTGGTCAGGGGACTACTTTGTCGCCCTGTGCACTAAAGGGCCAGATTTTCAGCAGCCAAGGA
CATCCATACCCAAGTGAATGTGATGGGACTTAAGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCA
TAGGAAGAAAAAAAAAAGATCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAAGC
TCTCCTCACAAAAAAAAAAAAAAAA
CitationS Stein, K Niss, M Kessel. Differential Activation of the Clustered Homeobox Genes CNOT2 and CNOT1 During Notogenesis in the Chick. Dev Biol. 1996 Dec 15;180(2):519-33. DOI: 10.1006/dbio.1996.0325.
Copyright© 1996 Academic Press. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_001012808.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XI
stage XII
stage XIII
Area Pellucida
Hypoblast
 
1-3
stage 3
Primitive Streak
 
4-6
stage 4
stage 5
stage 6
Early Mesoderm
Headfold
Hensen's Node
 
7-12
stage 7
stage 7
stage 7
stage 7
stage 7
stage 7
stage 7
stage 8
stage 9
stage 10
stage 10
stage 10
stage 10
Anterior Intestinal Portal
Foregut
Hensen's Node
Neural Plate/Tube
Notochord
Unlabeled
 
13-18
stage 14
Notochord
ea, epiphysis anlage
19-24
stage 20
stage 24
Limb Buds
Tail
e. epiphysis
all
 
 
 
  

Entry 3

GEISHA IdNOT2.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ATCCTCCGTGCTGGATACTCAGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGGTGACAAACAGCATGTTTGGTG
CTTCAAGGAAGAAGTTTGTAGAGGGGGTTGATGGTGACTACCATGATGAAAACATGTACTACAGCCAATCATCGATGTT
CCCACATCGGTCAGAAAAAGATATGCTGGCATCACCGTCAACATCAGGTCAGCTGTCTCAGTTTGGGGCAAGTTTATAC
GGGCAACAAAGTGCACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCGCAGCTTATCACAAG
GCACTCAGTTACCGAGCCACGTAACGCCAACAACAGGGGTACCAACAATGTCACTTCACACGCCTCCATCTCCGAGCAG
GGGGATATTGCCTATGAATCCTAGGAATATGATGAACCACTCCCAGGTTGGTCAGGGCATTGGAATTCCCAGCAGGACA
AACAGCATGAGCAGTTCAGGGTTAGGCAGCCCCAACAGAAGCTCTCCAAGCATAATATGTATGCCAAAGCAGCAACCCT
CTCGACAACCTTTTACTGTGAACAGTATGTCTGGATTTGGGATGAACAGAAATCAGGCATTTGGAATGAATAACTCCTT
ATCAAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGACTGGACCTCTCAGATTTTCCAGCACTAGCA
GACAGAAACAGAAGGGAAGGAAGTGGCAATCCAACTCCATTAATAAACCCTTTAGCTGGAAGGGCTCCCTATGTTGGGA
TGGTAACAAAACCAGCAAGTGAGCAGTCCCAGGACTTTTCAATACACAATGAAGATTTTCCAGCATTACCAGGTTCCAG
CTACAAAGACCCAACATCAAGTAATGATGATAATAAATCTAATTTGAATACATCAGGCAAAACATCATCCAGCACAGAT
GGGCCCAAGTTTCCTGGAGATAAAAGTTCAACTACGCAAAACAACAACCAGCAGAAAAAAGGGATCCAGGTGTTACCTG
ATGGTCGGGTTACCAACATTCCTCAAGGGATGGTGACGGACCAGTTTGGAATGATTGGCTTGTTAACATTCATCAGGGC
AGCAGAGACAGATCCAGGAATGGTACATCTTGCATTAGGAAGTGATTTAACAACACTAGGTCTCAATCTCAACTCTCCT
GAAAATCTTTATCCCAAATTTGCATCACCTTGGGCATCGTCACCTTGTCGACCTCAAGACATAGACTTCCATGTTCCAT
CTGAATACTTAACTAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTCGGCCGATATGGAGAAGATCTCCTGTT
TTATCTCTATTACATGAATGGAGGAGATGTATTACAGCTATTAGCGGCAGTAGAGCTATTTAACCGGGATTGGAGATAC
CACAAAGAAGAACGAGTATGGATCACCAGGGCACCCGGAATGGAGCCAACAATGAAAACCAATACATACGAGAGGGGAA
CATATTACTTCTTTGACTGTCTTAACTGGAGGAAAGTAGCTAAGGAGTTCCATCTGGAATATGACAAATTAGAAGAAAG
GCCTCATCTGCCATCAACCTTCAACTACAACCCTGCTCAGCAAGCCTTCTAAAGACTTCCCTTTTCTTGGGGTATGGCT
GTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCATCCTGGTTTTAATTCCTTGAGGATCTGGCA
ATTGGCTCATGCGAAGGGTCACCATTTGAGGTCCTGCCTTACTAATTATGTGCTGCCCAACAACTAAATTTGTAATTGT
TTTTCTTTAGTTTGAGCAGGGTCTGAATTTTTGTTTTTGTTTTATTTTTGCCAGCAGACAAGCTTGGGTCTGTAAAGAC
AAGCGAGTACACTGACAAAAGTTTACCACTTAGTTTTCCAAAATGTAAAAAGACAAAAAATAAGAAAAAAGACAAAAAA
TTAGACAACAAAATTTGCATTGTTCATTGTAGCACTATTGGTAATAAAAAATGTTTGTGCATTTTTATGTGAAGATCCT
TCTCGTATTTCATTTGGAAAGATGAGCAAGGTTTGCTTCCTTCATTTTACTTCCCCTTCTGTTTTTGAAAGGCAGTTTT
CGCCAAGCTTAATGCAAGAATATCTGACTGTTTAGAAGAAAGATATTGCCACAGTCTCTGGTTAGTTTCCAGAGTTGTG
TATTACTGAGCTTCATCTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAATAAATGTGTACATT
TTTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGTATATATTATATATATGACATCTATTT
TGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGCATGGATGCAATATATGAAAACGGGACATTCTGGAA
CTGCTGGTCAGGGGACTACTTTGTCGCCCTGTGCACTAAAGGGCCAGATTTTCAGCAGCCAAGGACATCCATACCCAAG
TGAATGTGATGGGACTTAAGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCATAGGAAGAGAAAAA
AAAGATCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAAGCTCTCCTCA
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001012808 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Area Pellucida
Hypoblast
posterior area pellucida (area covered by the hypoblast)
1-3
stage 3
Epiblast
Hensen's Node
Neural Plate/Tube
Hensen's node and surrounding epiblast / weaker in neural plate
4-6
stage 5
Head Process
Hensen's Node
Hensen's node (left side) / head process
7-9
stage 9
Hensen's Node
Notochord
notochord / Hensen's node and adjacent region
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.50456

Mouse

EmageMGI:1919318
EurexpressMGI:1919318
MGI GXDMGI:1919318

Frog

Xenbase991719

Fruit Fly

BDGPFBgn0017550

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070410-70
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