GEISHA - A Chicken Embryo Gene Expression Database
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DCN
decorin

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolDCN
Official Full Namedecorin
CGNC ID8567
also known asdecorin|PG-S2|bone proteoglycan II
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001030747
PolypeptideNP_001025918
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1634ENSG00000011465MIM:610048MIM:125255
Mouse13179ENSMUSG00000019929All phenotypic alleles (1):Targeted, knock-out(1) MGI:94872
Xenopus100101716, 447482485544
Zebrafish64698ENSDARG00000012066ZDB-GENE-010102-1ZFIN:ZDB-GENE-010102-1
Gene Ontology
Molecular Functioncollagen binding
Biological Process
Cellular Componentproteinaceous extracellular matrix
Links to other databases
Entrez Gene417892
Ensembl Gene
KEGGgga:417892

Entry 1

GEISHA IdDCN.Bandyopadhyay.2008Data SourcePublication
Complete cDNA Template Probeshow
CCCCTCCTCCTTTCCACACCTACAAAGCCTTTGCCTGGGTTGAATATTTAGTTTAATTACATCTCAGCTTTGAGAGCTC
CTGTTGCAAATCCCTGGATTAAAAGGTTCTGCCTGGAGTTGATGAACTGAGCCATGAGGCTAGTTCTCCTCTTCGTCCT
ACTGCTGCCAGTATGCTTGGCCACGCGGTTCCACCAGAAGGGCCTCTTTGACTTTATGATAGAGGATGAAGGGTCAGCC
GACATGGCTCCAACAGATGATCCTGTCATATCTGGATTTGGGCCAGTGTGCCCCTTCCGCTGCCAGTGTCATCTTCGCG
TTGTGCAGTGCTCTGACCTAGGTCTGGAAAGAGTGCCAAAAGACCTTCCCCCTGACACAACTCTGCTGGATTTACAGAA
CAACAAAATCACTGAAATTAAAGAAGGAGATTTCAAGAATTTGAAGAATCTTCATGCATTGATCCTTGTTAACAACAAA
ATCAGCAAAATAAGTCCGGCAGCTTTTGCTCCTCTGAAGAAACTGGAAAGACTGTACCTATCCAAGAATAATTTGAAGG
AACTTCCAGAAAACATGCCAAAGTCTCTTCAGGAGATACGTGCTCATGAAAATGAGATCTCCAAGTTGAGGAAGGCAGT
TTTTAATGGACTGAATCAAGTGATTGTCTTAGAACTAGGCACCAATCCACTCAAGAGCTCAGGCATTGAAAATGGAGCT
TTTCAAGGGATGAAGAGGCTTTCCTATATCCGCATCGCAGACACCAACATTACTAGCATCCCTAAAGGTCTTCCTCCAT
CCCTTACTGAGCTTCACCTTGATGGCAACAAAATTAGCAAAATTGATGCGGAAGGTCTGTCTGGACTCACCAACTTGGC
TAAATTGGGTCTCAGCTTCAACAGTATTTCTTCTGTTGAAAATGGCTCTCTGAACAATGTACCTCATCTGAGAGAACTT
CATCTGAATAACAACGAACTTGTCAGAGTACCTAGTGGGTTGGGTGAACACAAATACATCCAGGTGGTCTATCTTCATA
ACAACAAGATTGCTTCAATTGGTATCAACGACTTTTGCCCTCTTGGCTACAACACCAAAAAGGCAACCTATTCTGGTGT
GAGTCTCTTCAGCAACCCCGTGCAGTACTGGGAAATCCAGCCCTCTGCTTTCCGATGTATCCATGAACGCTCTGCAGTA
CAGATCGGAAATTACAAATAGATTTCTAAAGGCGGGGTTTGGTTGTATTTCAGCTAAAGTACCTGTTGTAATGGGCCTG
TTCAAAAAATTGTTGCTAACAGTTAATGCCAAATACCAGAAACTTCACTGTAAAGTGGAGATGATCCAATTATGTAAAA
TAAATTAATCATTACAGATGTACAAGATCAAACATACCATCAAAAAGAATTCCTGTCTGTGCTTTAAACTGACTTATTT
CAGCCTTCTTTTCCAGCATGCTTTCTGTGGTAATTTTTGGTTTGCTGAATGCTACAGGTTTTCAGATTCCACTGTATAT
GAGATTCGGAGTAAATATTTGGCTGCCACGGGTCCTGCAGCACGTGGATGCCAAAGCCTGTGAGATGCAGGAGAGACTC
ATCACGAACCCAGTTTTGGTTCTGATAGCTTCTAG
CitationBandyopadhyay A, Kubilus JK, Crochiere ML, Linsenmayer TF, Tabin CJ. Identification of unique molecular subdomains in the perichondrium and periosteum and their role in regulating gene expression in the underlying chondrocytes. Dev Biol. 2008 Sep 1;321(1):162-74. doi: 10.1016/j.ydbio.2008.06.012. Epub 2008 Jun 16.
CopyrightCopyright © 2013 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001030747.2
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-38
stage 38
stage 38
Leg Bones
Leg Mesenchyme
 

Entry 2

GEISHA IdDecorin.Singh.2016Data SourcePublication
Complete cDNA Template Probeshow
CTAGTGGGTTGGGTGAACACAAATACATCCAGGTGGTCTATCTTCATAACAACAANGATGCTTCAATTGGTATCAACGA
CTTTGCCCTCTTGGCTACAACACCAAAAAGGCAACCTATTCTGGTGTGAGTCTCTTCAGCAACCCCGTGCAGTACTGGG
AAATCCAGCCCTCTGCTTTCCGATGTATCCATGAACGCTCTGCAGTACAGATCGGAAATTACAAATAGATTTCTAAAGG
CGGGGTTGGTTGTATTTCAGCTAAAGTACCTGTTGTAATGGGCCTGTTCAAAAAATTGTTGCTAACAGTTAATGCCAAA
TACCAGAAACTTCACTGTAAAGTGGAGATGATCCAATTATGTAAATAAATTAATCATTACAGATGTACAAGATCAAACA
TACCATCAAAAAGAATTCCTGTCTGTGCTTTAAACTGACTTATTTCAGCCTTCTTTTCCAGCATGCTTTCTGTGGTAAT
TTTGGTTTGCTGAATGCTACAGGTTTTCAGATTCCACTGTATATGAGATTCGGAGTAAATATTTGTCAAACTATGATTT
AAAAAAAAAAAGAAAAAAGATAGTGATGGAGCATATTTTTATAGCCACTGAAGAAAAATAGTAGAGGAAAAAAGGACTC
TCAAGACATCTGTGAAACTTGAGAAGGAGAGAGTTACCTCCTTTAAATTTATGTCAAGCCCTGGAGGTTTAAAATATTA
CTATAACACTAAGCTAATTTGAATG
CitationSingh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
CopyrightCopyright © 2015 Elsevier B.V. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST608k3 . Decorin also known as DCN in NCBI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
Limb Buds
 
31-38
stage 31
stage 34
stage 36
stage 38
Limb Buds
 
all
 
  

Entry 3

GEISHA IdDecorin.Lorda-Diez.2014Data SourcePublication
Complete cDNA Template Probeshow
ATGGCTCCAACAGATGATCCTGTCATATCTGGATTTGGGCCAGTGTGCCCCTTCCGCTGCCAGTGTCATCTTCGCGTTG
TGCAGTGCTCTGACCTAGGTCTGGAAAGAGTGCCAAAAGACCTTCCCCCTGACACAACTCTGCTGGATTTACAGAACAA
CAAAATCACTGAAATTAAAGAAGGAGATTTCAAGAATTTGAAGAATCTTCATGCATTGATCCTTGTTAACAACAAAATC
AGCAAAATAAGTCCGGCAGCTTTTGCTCCTCTGAAGAAACTGGAAAGACTGTACCTATCCAAGAATAATTTGAAGGAAC
TTCCAGAAAACATGCCAAAGTCTCTTCAGGAGATACGTGCTCATGAAAATGAGATCTCCAAGTTGAGGAAGGCAGTTTT
TAATGGACTGAATCAAGTGATTGTCTTAGAACTAGGCACCAATCCACTCAAGAGCTCAGGCATTGAAAATGGAGCTTTT
CAAGGGATGAAGAGGCTTTCCTATATCCGCATCGCAGAC
CitationLorda-Diez CI, García-Porrero JA, Hurlé JM, Montero JA. Decorin gene expression in the differentiation of the skeletal connective tissues of the developing limb. Gene Expr Patterns. 2014 May;15(1):52-60. Epub 2014 Apr 24. DOI: 10.1016/j.gep.2014.04.003.
CopyrightCopyright © 2014 Elsevier B.V.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Lorda-Diez et al. 2014.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
stage 23
stage 24
stage 24
Limb Buds
 
25-30
stage 29
stage 30
stage 30
stage 30
stage 30
stage 30
Limb Buds
 
all
 
 
 
  

Mouse

EmageMGI:94872
MGI GXDMGI:94872

Frog

Xenbase485544

Fruit Fly

BDGP

Zebra Finch

ZEBrADCN

Zebrafish

ZFINZDB-GENE-010102-1
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