GEISHA - A Chicken Embryo Gene Expression Database
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PLXNC1
plexin C1

Gene
Official SymbolPLXNC1
Official Full Nameplexin C1
CGNC ID8596
also known asplexin-C1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_416143
PolypeptideXP_416143
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene417901
Ensembl Gene
KEGGgga:417901
GEISHA IdPLEXINC1.Mauti.2006Data SourcePublication
Complete cDNA Template Probeshow
ATGTGGATCACTGGGAGCTTTGTATTTGCACTTAAAGAGCAACTGGAAGTCAAGGTGGAAGCCAAGGAGCTGCAGGCAG
TGCTTGTTAGTGGTGCATCTTTGCATCTGCCCTCGGGCGTGCGGAGCAAGCTGCTGCTGCTCACCCACGCCGAGGCCGG
AGTCGACGGACAGCTGCTGGCCGGCTGGACGCAGGGGCAGGGCAGCTGCGAGGTGTGGCGGCTGCCGGACTACCGCCTG
GTCCTCAACCGCACGGAGGTGGTCAGCTGCCTGCCCCGCGGCTCCACGGCCGGAGTGGTCTTCCGGCAGGCGGACGACT
GGTACCTGGCGGTGGCGGCCACCTACTCCAACGGCGAGCGATGGCCCCCCGCGGGCTGCGAGCCGTCGGAGTCGAGCCA
GACGGCGGCGATTACCGTGCGCCCCGTAAAGACCCTGGAGCCTCGCGGAGAGTGGGACATCATCAAGTACAACAAGGAG
CCTTTGCATTTCGTGGACGCGCTGTGGTGGGGTGGCCGCCTCTTCTTTCCCTACTACCGGCTGAAGGCCGAGCTGGACA
GGGACCCGGAGCTGCCGAGCATGGTGGTCATGCATCAGCCGCATCGCTCCGAGCACAGCTTTGACCTCCAAGGCCAAGT
GTATCTGGACTGTGGTTGCAGGAGCCTCCTCATCTCCTCCAGCCTCGTCCGCCAAGGAGAGCGGGGCTGGTGGGTGGGC
GTCTTCCGCCACAACCACGGTGACAGGGCCTGGGACTCCACCGCCGTCTGCGTCTTCGGGATGGAGGAGCTGCGGGAGC
CAACCTGTGTGTACAGCACACACTTCTACGCGGGGACCAACTGCAAGGTACAATCAATCAAGAAATCACCCACCTTGAT
TCACTCTGGATTAGTGGCTGTTTATGGCACAGTTGTTTTAAATCAGATCGTTCTCTTTCTGGGAACAGATGATGGACAG
TTACTGAAGGCTATTCTTAATGAGGATATGAAATCTAACTGCCCAGAGATTTTGTATGAAATTGAGGAAGAAACCTCTA
TTTTTCCCAAACTTCGACTTGATCCAGTAGATAGTAACTACATCTATCTGTCCTCTGCCAACAAGGTGAGAAGAATACC
AGTTGCAAATTGTGGTAGATATGTTTCCGAGCAAGAATGCTTATCTGCAAAGGATCCCTACTGTGGGTGGTGTTCTTTG
AATCAAAGGTGCACATTAAAAGAGAATTGTACACGTTCAAACAGCACAAAGGGTTGGTTTAACATTTCACATGCACCTG
ATAAAGATCTGAAAATCCTGCTAAGGTTCCCTGCCAGAAATCAGATTTCTGTGTCTGCAAGTATAAGCAAAACCCTTAC
TTCCTGTAGAATAAAAATTGTAAAACCTATTGAAATGCCTCATGAAAATGTAGTGCTGAAAAACTCATCCTGTGTCTGC
AATCTCACTACTCCGGTGACACTGGATAATGCTTGGGCCCCTTGCTACAAGAAGGGTATTGAGTTGTTGGAGTATGTGC
GGAGAAAAGCAGTGCAGCTGCTGAAGGGACTGGGAAAACAGACTTATGAGGAGTGTCTGAGGGAAATGGGGCTGTTTAG
TCTGGAGGAGTTGAGGCAACACCTCCTCACTGTCTACAACCACCTGAAAGGAGGTTGCAATGAGGATGTTGATCTCTTT
TCTCAGCATATCAACATTCATTCCATCAAGCCTTTGTGGATTTCTACGTTGGGCAAAAGTGAAATAACAGTCAAAGGAG
AAAACTTTACACATGAATCGGGCATAAAACTGATACTGACAGGAAGCAGTGTCTGTAAACAAGAAATCATTAAAGTTAG
AAATGTGATAAATGATACACAGATGACATTTGCTCTCCCACCAACACGTAAAGAGGCCAAAAGTGTATGCATACAGGCT
GATGGGAGAAAATGTTCACCACCAGTCACCCTGCATTATGTTTCACTGCCAGCATGTTTTGGAATCACACCAAATACCT
CCTGGATCAGTGGTGGTCGCAAAATAATTACAACTGGTAGAAATTTGAATGTGGTGGACAAAGTGATTATTTCAGATGA
CCAGAGATCAAACCTCACCATCTCTGAGTGTCCTCAAAACAAATCTGAGTATCATTACTTATCGCCAAGTCTGAGCCAT
GCAACGGAGGGTAAAGTTGTTGATATGATATTTAAAGTGGAAACTACCTTTATACCATGTGTCAAATTGCACTATCACC
CTGACCCAGTGTTCATTAACTATCAGCTGCACACTGAGCTGGATCCTGATCTGGAATTAAAAATATATAAAGAAAATGA
CAACTTGAATATTTCTAAAACTGAGGTAGAAGTTTATCTGTCATATATGAATGGTTCACAGACTGCAAAGATATACTTC
AGTGTCCAAAATATTACTGAAAAGCCAGACCGTAGCACCATACTGTGCAAATTCAAAAGGGAAGGAACAGAAAAGATTG
ACTTTTCCACAGTGAAAGTTTTTGTCAAATTAGGAAATTTTGAGCTTGAAGTCAAACCAACGTCATCATACATATATTT
ATATGTCCTCATTTTGCTACCTATTGTAGTGGGTGTCATAATAGTGGCATTCATAGTTACTAGATACAAGTCCAAGGAG
TTAACTCGTAAACAGAGTCAGCAACTTGAATTGTTGGAGTATGAAATTCGGAAAGAAATACGCGAGGGATTTGCTGAAC
TGCAGATGGATGAATTAGATGTGGTGGATAGTTTTGGAACTGTTCCTTTCCTTGACTACAAACACTTTGCTATTAGAAC
TTTCTTTCCGGAGTCAGGAGGTTTTGCATCCATCTTCAGTGAAGACATGCCACAGAGCAGAGACCAAACACGCAAGGAT
GAAAGCTTCAACATGTTGCATGCTCTGATTTGTAACAAGAACTTTCTTGTTACTCTCATTCACACTCTTGAAAAGCAGA
AAAATTTCTCTGTGAAAGACAGGTGCTTGTTTGCATCCTTCTTGACTATTGCACTACAAACTAAGCTAGTTTATCTAAC
CCATATTTTGGAAGTGTTGACGAAGGACTTGATGGAACAGTCAAGCAATGTGCAGCCTAAACTCCTGCTCAGACGAACT
GAATCTGTGGTAGAAAAATTGCTGACAAACTGGATGTCTGTCTGCCTTTCTGGGTTTCTCCGGGAGACAATTGGTGAAC
CTTTCTATTTGCTAGTGACAACCCTCAATCAGAAGATAAACAAAGGACCTGTTGATGCAATAACTTGCAAAGCCCTGTA
CACGCTTAACGAAGACTGGCTGCTGTGGCAAGTGTCTGAATTCAAAACAGTGACTGTGAATGTAATCTTTGAAAAAATC
CCAGAAAATGAGAGTGGAGATGCCTGTCAAACTATTCAAGTTAACGTGCTGGACTGTGACACCATAGGCCAAACCAAGG
AGAAGAGCCTTCAAGCTTTCCTTAATAAGAATGGCTTTCCCTATGGTCTTCAGCTGGATGAAATTGGCCTTGAACTTGT
GTCTGAGGAGCAGCAAAGAGAACTGTTAGATATTGACGGTTCCTCTGAGATGATGGAGGATGGGATAAGGAAGCTAAAT
ACCATTGCTCATTACAAGATTGCAAATGGAGCAACCATAAAAGTCTTGAAAAAGAAGACAAATACCCGATCAGATGTGG
ACTACTCTGACGAGCACTGTCATTTGATTTTACCTGACTCTGAAGCAAATAAAGACATGAAAGGATCGGGTCACAAAGG
AAAGCAAAAATTCAAAGTGAAAGAAATGTATCTGACAAAGCTACTGTCAACCAAGGTTGCAATTCATTCCGTTGTCGAA
AATCTCTTCCGGAGTATTTGGAGTCTACCTAACAATAAAGCTCCTGTTGCCATCAAGTATTTTTTTGACTTTCTGGATG
CCCAGGCCGAGAGCAAAAGAATCACTGACCCCGATGTGGTTCACATATGGAAAACCAACAGTCTTCCTCTGCGCTTCTG
GGTGAACATACTGAAGAATCCCCAGTTTGTCTTTGATGTTAAGAAGACGTCACATATAGATGGCTGTTTGTCTGTCATC
GCACAAGCTTTCATGGATGCCTTTTCTCTAGCAGAACAGACAATGGGGAAGGAAGCACCAACAAACAAGCTTCTCTACG
CTAAGGACATTCCGCTCTACAAGAAGGAGGTGAAGGCGTACTACAAAGCCATCAGGGATCTGCCTCCCTTGACCACTTC
AGAGGTTGAAGAATTTCTAACTCAGGAATCTAAGAAACATGAAAATGAATTTAATGAGGAAGTGGCCTTGATGGAAATC
TACAGATACATTGTGAAGTATTACGATGAGATTGTCAGCAAACTCGAGCGAGAACGGGGGTTTGAAGAAGTCCAGAAAC
AGCTCCAGCAAGTAAAAGCCTTATTCGATGAAAAGAAGAAATGCAAATGGGTTTGAGCAGAGCGCTGCCTCACAGTGTC
ACTGCGGGGAACTTGAAATAAGCGCTGCTGCTCCCCAGGCAGTTCTGAATGACTCTGTACAGGGCTCGAGACAATTGGA
CGCTGCTTCACTCTGACCATTCCATACCCGAGTTTGGGAACGAAGGGTGCGCAGGGCTGCATATTGGACACGCCAATGT
GACGGTGCGGCTGAGGCTGGCGCTGGCGGCCCAAGGGTTTTAGGTACTTGAACCCAGGTACCGTTTTGGTTCAAAGCTG
CTGCCTCAGTAAGCTCCCCACAGACTGAAAAGCAGCTTGCAGGAGCTGCACGCTGCAAGCTCGGAGTTGCCCATGTGAA
CCTTTAGGCTGCTTTGCTCTGTTTTGAAGAGAGAAAGCTGATGTTTCGCCACACCCTTCCCACAGCCACGGCAGTCTGT
GCAGACCAGACAGGCTGTGGGGTCAGCACTCTGGCCAGCTGCAGGCTCCTTCCTTCCAGACAAATGTAGGCTGGCTCCT
GTTGCAATGAAAACCAGCACCCAGTGACACTTGGGCGAAGCTTGCTTAACGAGGGGGTGGGGCTGAGCTTTGAAGTGCA
AATGTCACATGGCAGGAGTTTAGAAATGGCTTTGCAGGGGAAGCCAGGAGGTGAACAGGGCTGTGGAGAAAGGACCTGC
ACTGGCATCAGTCTGTGTTTACATTTCTGCCTCTCCGTCCTTACACAAGCTGTGAAACCTCTGTGAGCAGCTTTGCATG
TGTAACCTCTGTGGCCGCGCCGCCTCAGAACAGGCAGCTGTGATGGCTGCGCTCAGAGCACAGCCCCCCTCCGCCAGCT
CTGTCAGCCTCACCGCCGTGTGCAGGTGGCTCACAGACCCAACGCCAGCATCTCATTTTATTTTTCCAGGTTGTCCAAA
CAAAGGTTTTGTCAAAAGAAGGTTAGTCGGGGCGAGGGCAGCCTGCCCTCATCCTGCTGGGGTGGTTTTTGAGGCGTGG
ATGTTTTCAAAGACCCGGGAGGAAGGAGCATTGCATTTGTGGCTGACACCCAATGTAAGAGCTGTGGTGCTGCTCCGCT
GCCACACGGCTGCACTCCCGTGTGCCACAACAAAGCTGCAAGGTTTGGTCACCGCGGGCTCTGCTTTGATTGCTACGAT
GGCACATACTGAGGCTTCAGCCAGCACCCGGGTTTCAGGCAGGGCTTTGATTAGCGGCATCTCCTCCACAACGTGGGAG
GAGGCCCAAAAAGCATTGTCTCAAGGCTCCTGAGGGCCCCACCGCCGGAGGCAACGCAGCAGCCCTGCGCTGTCCCCTG
CCTTGGTACGACCGGCCCACGCTTAGCGTAGGCAGCATCTGCTGGGGCTGGGATGAGGCAGAGATGTGGCACGCGGCTC
CCAGGCAGCCGAGCGCTCCAAACAGGTGTTCCCATGTGGCACTGCCTTGGAGAGGCGCAGAGGCCGCAGCACACCAGCA
GAGCAGAGCTGGCCAGGCTGGCTGTGCATGGCCGGCCAGCAGCAGGGGGGGCAAACAGCCACACCTGGGCAGAAGGGAG
GGCTACCACGGGAAAAACAAAACAGAACACGTTGCCTACTGGTCTGCCCCTTCCCTGCCGTATGATTGCACAAATTGTT
CCTCTTGCGTATCAGAGAGGGGAGCCGCCAGTCCGTACTGTGATGGCTTTGTTTTAATTCAAGTCTTATACTTGCTATT
AAGTTTACACTTTATACTTGATGGAATGTATGGCTTTGTTCAGGAAGCTGCACTACAGTGTTGCAGTGCTTTCAGCAGC
TCTCTCCTCTGCCAGGCACAATACAGCGTGGTAAGTTTCATTTCAATGGAAAAGAGCCGAGCCAATCCTAACCTATCAT
CTCGCCCTCTGTCCTAAAGGAGCGGACTGTGGCTTGAGTAGCACATAAAGGCAGATCAGCTGTACTTAAGGGCTGTGAT
TTTTAATATTCTTAACCTGACCTTTTAAAGCAGCATCAAACTAATCGATAATAAAGCACAGTAACAACCACTGAAGGAC
AGGCATCGGCCGTTTGCTGGCTGCAGTCAGACAGACGTCTCACGAGTTGAGCTCCGTTGCAGTCGTTGGCTGGAAGCGC
ATTAGAAGGAAACGCGATCGTTTTGTTCAACAGTGACCTTCTGTACAGGCAGAAGTACACCTCGCAACTTCTGCTTGGA
AAGCTGTAACATAGAATCTGTTTGCGTGGGTCTGATCCTGTGAACCTCACTCTGTGTGTTTATATGATGAGAAAACTGA
AACCAGTCCTATTCTGTATTTGTACTACTGCTCGTTTGCTGCAATAGCATTCATGATTTCTAGAGATTAAGTATGTGTT
GAAGCAGGCCCTGTAGCTTTACCTACGGCCTGGAATAGGATTCTCGCCTTGTATCGGAGCCTCCTAACCAGCTTCACTC
TGTTGTAGCCCATTTAAAGTCATGCTGGGACTTTGTAACCCATGAAGTGAATCTCACAAAGTGACGTGAAGTATAACGA
AGTGATTGTAGCTCTTGTGGTAGGTTTGGGACCTCACAGAACATTGGCACAACTCCCACCCTCACAGTCTGCCGTTCCT
CGGACACAACAAGGTATGACTAAAGCTGCCTTCTGGCAACCCAACAATTGTAGTCGCATTCTCTGAAATGAAAGCGAAC
CTCTCTTGAACCGATTTCCACATGTTTACAGGCAAACCGCTATTGCAAACAGCTTATTTTCTAACACTAGCTTACAGAG
CATTATTTTGCAGTCATTTAAAGTCAAATGCTTCTAACGTGTAAAGTAATTCCTGTTGTACAGAAGTTAACCTGTTGTT
TAAAATGAATGGTTTGAAAAAAGTGCAAACGACAAATACATGTTGGTGTTTGTATGGGTTTATCTCGAATAAAACGCAT
CGGAAGGCTGGTTAGGTTACTTGGTGTATTTTACAGCGGTTAAGAGAGCAAACAGCTTTGTAGCGGTGCCCGGGCCACG
GCAGGAGGGGA
CitationMauti O, Sadhu R, Gemayel J, Gesemann M, Stoeckli ET. Expression patterns of plexins and neuropilins are consistent with cooperative and separate functions during neural development. BMC Dev Biol. 2006; 6: 32. Published online 2006 July 17.
Copyright), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_416143.3 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Spinal Cord
 
19-24
stage 22
stage 22
stage 22
stage 22
Notochord
Paraxial Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Surface Ectoderm
 
25-30
stage 25
stage 25
stage 30
stage 30
Spinal Cord
Spinal Ganglia and Nerves
Surface Ectoderm
Trunk Mesenchyme
 
31-40
stage 35
stage 35
stage 40
stage 40
Spinal Cord
Spinal Ganglia and Nerves
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.55785

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrAPLXNC1

Zebrafish

ZFIN
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