GEISHA - A Chicken Embryo Gene Expression Database
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RFX4
regulatory factor X4

Gene
Official SymbolRFX4
Official Full Nameregulatory factor X4
CGNC ID9598
also known astranscription factor RFX4|regulatory factor X, 4 (influences HLA class II expression)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_416306
PolypeptideXP_416306
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5992ENSG00000111783MIM:603958
Mouse71137ENSMUSG00000020037All phenotypic alleles (4):Chemically induced(1) Targeted, other(2) Transgenic(1) MGI:1918387
Xenopus1004961351018508
Zebrafish403016ENSDARG00000026395ZDB-GENE-040909-2ZFIN:ZDB-GENE-040909-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418070
Ensembl GeneENSGALG00000012647
KEGGgga:418070
GEISHA IdRFX4.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCCTCCTGATGTGGTCCTGTTTTG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGTCCCCATTGATGTAGGCGAAGcDNA Template Length903
Forward cDNA Template Probeshow
CCGGNNGNNAAAAGTGTTGCATGGTGCTCATATTCGGAATTTCTGCGCGTAGTCAGAAGGGGTGTACATGTCACTAGAA
TTGCCGTATCCTTGTGGAGTGCATGGGTGGGCTCGTGTAGCANGAGTTCGCAGCCGGCACCTCCGGCCAGCGAGGAGTC
ACTGGTGTGGGATGCAGCCTTGGAGTACTGCTCATCAAACAGGGCTCCATTCTTGATGTTGGGCTGTTGAAAGGGTACT
GTGAAGAGCTTCTGTGGTAAGCGGAGTAATGGAGTGGTCCAGAAATAGCAGTATCATGTGGTAAAGATGGATATTGACT
CTGCATTGGATGGGGGTGCTGATTGCTATAGCTACCGTAGTTGTAACTTCCTGTGTATCCATGTTCTTCTCTGTGGGGA
TAAACAGGTATCCGATGTGTGACAGATGATGATGGTACGTGAGGACTTCTCATGCAGGGCAGCTGTTGGGAATTTTCAG
CAGGAGACCCAGCAGCTGTTGTCACAGTGTAGGTGAGTGACCACGTATAGGATTGCATAGCCCCTGTTGTAGCTGCTAT
GCCACCGTACTCTGGGGACTGGTTGCTGACAGGTGAGGGGGCAGAGGGCACTTCCACTGAAGTGGCAGATTTAGCTGGG
GAGAATGGCACTGGGGAGGGAGTTGGAGGAGCTGGTTCGCTCAGGATAATTTCTTCTCGTATTTCTGCTGTACTTCCTT
CTCCTTTCATTGCCCTCATTAGCTCATTAGCTCTCTCTTGGCAATGAAGTGATTCTAGCAGGTACAATACGTAGTCATC
AAACATCAAGTGAATAAGGTGAAAAGACCCAAAGCTGGGTGCACTGTGCAAAGTCATGTCCCGAATCACTCGAGTGCCA
AAACAGGACCCATTNCAGGAGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Neural Plate/Tube
Notochord
 
7-12
stage 8
stage 9
stage 9
stage 10
Neural Plate/Tube
Notochord
 
13-18
stage 18
Forebrain
Hindbrain
Midbrain
Notochord
Spinal Cord
 
19-24
stage 19
stage 21
stage 23
Eye
Forebrain
Hindbrain
Midbrain
Notochord
Pineal Gland
Spinal Cord
 
25
stage 25
Ear/Otic Placode
Eye
Forebrain
Hindbrain
Midbrain
Pineal Gland
Spinal Cord
Spinal Ganglia and Nerves
 

Mouse

EmageMGI:1918387
EurexpressMGI:1918387
MGI GXDMGI:1918387

Frog

Xenbase1018508

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040909-2
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