Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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FOXJ2
forkhead box J2

Gene

Official Symbol	FOXJ2
Official Full Name	forkhead box J2
BirdBase ID	BB-GG3765
CGNC ID	10669
also known as	FOXJ3, forkhead box protein J2\|forkhead box J3
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_416484
Polypeptide	XP_416484
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	55810	ENSG00000065970
Mouse	60611	ENSMUSG00000003154	All phenotypic alleles (2):Targeted, other(2)	MGI:1926805
Xenopus	448174, 447345			483645
Zebrafish			ZDB-GENE-100922-240	ZFIN:ZDB-GENE-100922-240

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	418259
Ensembl Gene
KEGG	gga:418259

GEISHA Id	FOXJ2.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-ATCGCCCAGCTCATCATCTG-3’
Reverse cDNA Template Primer	5’-ATTAACCCTCACTAAAGGTGCTGGATCACAACACCCTC-3’	cDNA Template Length	983
Complete cDNA Template Probe	show ATCGCCCAGCTCATCATCTGGTCCCTCGGCCTTCAGGGCCTCCTCCAGGCACCAATGAGGAAATCCCTGATGATTTCGA CTGGGACTTGATCACCTAGCGAGTTACAGACTTAAGAGCCCGTCCTTTGTGAAGGACGTGGGAGGAGAGGGGGACGTGG GGTGAATGGTGCCACACCACTGACTCCAGCCTTCCTACCTTGCCTGTATATAGATATATATTCTCTATCTCCGCCAGAG AAGCCACCGCAAGATGCTGCCGAAGATAATCTTTCATTGCGTCCTGTTTTCTTTTTTCTTCTTTTGTTTATTATTATTG TTGTTGTTGTTGTTGTTGTTATTATTATTATCAATAATTGAGCACAGCCCTTCCCCTCCTCTGGTGGCCTCGGGTGCAT CAGATCAAATCTTGTGTGGTGCCCTGTATTGGGCAGAAAGATAGGTCCTTGCTGCCACAAAAAGACCTCAGAAGGCTGA ATCTTTGTGTGCATCTTTCTCTGCCTCTGTCATTTTGCATTTAGCAATCCCTCTTTCCCTTCAAAGCAGACAGTAAATC TGTTGTATTGGCTACTGAGTGAGAGTCTAGTAGACCCCGGGAGCCTGTAGTTATGCTATTTCTTAAATGTTGTAAAGGT CAGGAGGCTAAAGGGACACTGTGGAAGGGTGATTTCAGCTCAGTGAACTGTTTCACATCAGCAGGAAAAGCAAGAAAAG AAATAGAGATCCCAAGTGCAAATAGGATAATCTCTTTAAGTTGGGAGAGCTAAGCTGAGCTGGGAGGGAAAACCTGAGT TTGGAGAAAGGGTAATATAGTAAAAATGATGTTTCAGCAGAGATATTGGGTTTCAGAAAGCACTGCCTCCTAGTGAGGA CCAAGAGTGATTTTGAGAGGATCCTGACTACTCTGCCTTTTGCAGTCTCCAAGGAAGTGAAGCCTTATGTACTCATCAG GTAAAAGAAGCAGTCGAGGGTGTTGTGATCCAGCA

Stage

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Comments (click to highlight)

7-12

stage 8

13-18

stage 16

Ubiquitous Embryonic

19-24

stage 20

stage 20

Forebrain
Foregut
Head Mesenchyme
Hindbrain
Mesonephros
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Ubiquitous Embryonic

25

stage 25

Widespread Expression

Mouse

Emage	MGI:1926805
Eurexpress	MGI:1926805
MGI GXD	MGI:1926805

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-100922-240

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