GEISHA - A Chicken Embryo Gene Expression Database
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FARP1
FERM, ARH/RhoGEF and pleckstrin domain protein 1

Gene
Official SymbolFARP1
Official Full NameFERM, ARH/RhoGEF and pleckstrin domain protein 1
CGNC ID12671
also known asFERM, ARHGEF and pleckstrin domain-containing protein 1|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)|FERM, RhoGEF and pleckstrin domain-containing protein 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001252064
PolypeptideNP_001238993
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.8000
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10160ENSG00000152767MIM:602654
Mouse223254ENSMUSG00000025555All phenotypic alleles (2):Targeted, other(2) MGI:2446173
Xenopus100486945486839
Zebrafish100329707ZDB-GENE-070424-163ZFIN:ZDB-GENE-070424-163
Gene Ontology
Molecular Functioncytoskeletal protein binding, Rac guanyl-nucleotide exchange factor activity
Biological Processdendrite morphogenesis, regulation of Rac GTPase activity, synapse assembly
Cellular Componentcell junction, cytoskeleton, cytosol, dendrite, dendritic spine, more...extrinsic component of cytoplasmic side of plasma membrane, filopodium, synapse
Links to other databases
Entrez Gene418781
Ensembl GeneENSGALG00000016886
KEGGgga:418781
GEISHA IdFARP1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCAGTCATCTCCCTTGATAAGCCC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCGTTGCTGTAAACCTTTTCCAGACcDNA Template Length812
Forward cDNA Template Probeshow
AAACTTACTAAGAACTGCCCAGGTCTAATGGAACTCCCTTCCTGGGGATCACCAGATTGTCAATGCCTATCAAGGTCTT
TCTTGAGTTCATGCAGCCTTCTGGAAGTTTTCCATCTTTATCATATTGCCGTGGAGCTGAGCCACCATTTCTGTAATCT
CAGCCAAAGCAGCTCTTGAATCCCTGAAGTCTACGTGGTTTGGTGGGTAGTGTTTGCAAAGTCTCTCCATTATCTGCTT
GTAGTGCATAAGCCTATGTAAAGGCCTGAGCAGGAAGGTATTGAGAGGCAAGTAGCAAACTTTCTGTAGCTCGAAGTCC
CTGCAAAAGGTCTCCAGCTTGCGAGAGTTCTTGATTCCATTCTCCAACTCAGTTAAAATCTCATTGTGCTTCCACAGGT
GAATTGTCAGTTGCTTCATACCCTGAATGTTCTTTAGCATAACATCCCCGATTCTTTGGTGACCTCCTTTAATGTGAGC
GTTAGAGCGGCCTTCCCACAGAGCAAGTCTCTGCTCAATTTCCTTGAGAAAACCAGTGTGAAATTTGTGCAAAGGTTCG
AAGTTGGAGAATATGAGGTTTTTCAGAGTCTCGGGCATGCAATCCTCTTTACTCACTGCACTCTGAAACCACGATGTGA
TGACTTCAAGGTCCTTCAGGTACGTTCGTTCTGTGGTCGCTACTTCTTTA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
stage 3
Area Opaca
Epiblast
Primitive Streak
 
4-6
stage 4
stage 4
stage 5
stage 6
Area Opaca
Epiblast
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Notochord
Primitive Streak
 
7-12
stage 8
stage 8
stage 9
stage 10
stage 11
Anterior Intestinal Portal
Blood Islands
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
Widespread Expression
 
13-18
stage 17
stage 18
Anterior/Second Heart Field
Face Mesenchyme
Heart
Leg
Limb Buds
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Somites
Wing
 
19-24
stage 23
stage 24
Face Mesenchyme
Forebrain
Gut
Isthmus/MHB
Leg Mesenchyme
Mesonephros
Midbrain
Notochord
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.8000

Mouse

EmageMGI:2446173
EurexpressMGI:2446173
MGI GXDMGI:2446173

Frog

Xenbase486839

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070424-163
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