GEISHA - A Chicken Embryo Gene Expression Database
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ELF1
E74 like ETS transcription factor 1

Gene
Official SymbolELF1
Official Full NameE74 like ETS transcription factor 1
CGNC ID50862
also known asETS-related transcription factor Elf-1|E74-like factor 1 (ets domain transcription factor), E74-like factor 1 , ets domain transcription factor, elf1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006269
PolypeptideNP_001006269
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.48307
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1997ENSG00000120690MIM:189973
Mouse13709ENSMUSG00000036461All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:107180
Xenopus780315, 495059492874
Zebrafish30396ENSDARG00000020759ZDB-GENE-980526-335ZFIN:ZDB-GENE-980526-335
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418828
Ensembl GeneENSGALG00000016947
KEGGgga:418828

Entry 1

GEISHA IdChEST596b9Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCGGCTCGAGCGGGGACGCGGCGCCGCAGGCCCCGCTGCGAGGCGGCCCGGGAGCGGCGTGAGGGGCGAGATAAACGGC
TGTCCGCGTGGGAGAAACAGCTCAGGAAAGAACTCTCCTTGGTTTCTTTGAGAAGAGAAGGACCCAGGAACGCTGATGA
TCTGAGAACTACTGAAACTGCCACTTGGTTCATTCTGTGATCCTGCCTTTCTGCCCTGCTGCACCTTGGTGACACTGTC
CGTTCTTTTCCATTTGAGAACGCTTTTCTTCTTATGTGGAGCTGAGAGCTGGGAATGCGTTATTATGGCAGCAGTTGTA
CAGCAGAATGAGCTTGTGTTTGAATTCGCCAGCAACGTCATGGAGGATGAGCAGCAGGTATGGGATGGTGGAAGAAATG
GCATTTGTACGAGTTGGTGCAAGGAATGTTAGGAAAACGTGAGGAAAAGGTGTTGTGTAAAACACAAGAAAGCAAACAC
TGAGATCATTATTGTTGCAGCAGACCTCTGCAGTTTCAAAAGCTTCCTGTTGCTTCCTGTAACTTGCACAAGCAGAGCA
GAAATTGGTTGAAATGTTGTAACTTCTGCAGAATTGCAGAGACCTCCTCTGAAGATGTTTTTCCTTTGTCACTGATTTG
TGCCAGTAGAATCCATTCGTGCTGTAAAATTCCTGGCATTCTGGTATTTGACGGTCGCTTNCAGTTTTGTGGTATGCTA
GGATAAAATCCAAGAGAAAGCAACTGTCACACTACAGGTGACTGGAAGGAGCAGTAAGTGTTTGCTCTCTGCTCTTTGA
AGATTGGTTTGCAAACTGCATTACTGTGTGTATATCAGCTATTCG
CommentsNo specific expression detected stages 4-18.
no images

Entry 2

GEISHA IdELF1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGAACAACCAAAGAAGAAAAAGGGG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGGCTGCTGGAATCTCTGCTCGGcDNA Template Length1289
Forward cDNA Template Probeshow
TTTTCCCGAGCCGAGCTAGATCTCTAATTTGTCACCGTCGTCTTCTTTTAGCACTCCTTGTACCCCAATCTGTTTAGCT
TCTGTTGCTTTAATAACTGAAGTGATCACTGTGCCAGATGGATGAGCAACCACCTGTGAACTGCTGGGTGAAAAAGTTA
CCACTGGGGTGGTGGCAGTGAAGGATGGAGACGAAGCCACGTTAGCTGTTCCATTGCATATTGTCTGCACGCTGCTGGT
GAGAACCTGCTGAACTTGTGCTGGGCTCAGCACAATCGAGGAAGGAGGTGAGACTGGCTTCTGAGACTGTAGCATGACA
TTTTCTTTAAGAACTGTCATGGGCTGTGAAGTAGGAATGGCTTGTAAAATAAATTTTTGGGGCGTTGCTGCTGAGGCTG
GATCTGTGCTGGCTATCACTGTAGTAAGAGGCACCGTCTGGAGTGTTACAGTATGAAGCTGCTGATTTCCAGGAGAAAC
AACCACTGGGACTTGGGTTGGAGTCTGTAAAGTCCTTATATTCTGAACTGAGGGATTTAATGTTTCATCTGGAACGTTA
CTGGTTACAGCCGCGTGTCCTTCTGTGAGGGTATGCAATGGCTGCATTACGTGAACTGTCCGAAAAAGCTGAGTGGGAT
GTACTGGCTGCGTAGACTGCATTGTCCTCAAAACTTCTGAAGTCAAGCCAGGTGTCTGCTGCTGTACAACTTCTACGTG
CTCCTTAAGCTTAGCAGGCTTTGAATTTCCTGTTTTTAGAACTGTGGTGGATCCTCCCTTTGTTCCTGTGTTTGCAGAC
GCTCTAGATCTGCTCGACTGGTTTCTACTGGCCACAGGAGTTGAGAGCAAACTTGAATCTGATGATTCAGTGCTAAGAC
TTGCATCTTCATCATCTATATAGACGAGATCTTTTGGCATTTCCTTTAACTGATACACTAGGCGCTGACCTTCTACTTT
AGCCAGTATTCCTCTTTGGTAATAATATCTGAAAGCTCCACCCATTGTTTCATAATTCAGTCAGGTTTGTTTTTGTGCT
TTCCCCCAACCGGACCCGGCTTGGAATCTACAATTTGAAAATGCCCTTTCCCTTTGATCCCCTGAAATACTTAGACACT
AACTTTTTCCGGACCATGCTAAAAAAACCCCAAAAAAATTGGGTTCCCTCCCCCCTGGTTTTCCTTTCCAAAATTTTTG
GCGTTTTCCGGAACATCGACAAAAGGTTGCCCTCTCCCTTTTCCCTGGGGGACAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Unlabeled
 
4-6
stage 5
Area Pellucida
Low level expression observed.
7-12
stage 7
stage 8
stage 9
stage 11
stage 12
Anterior Intestinal Portal
Area Pellucida
Blood Islands
Blood Vessels
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Widespread Expression
Stage 7+ to 8-.
13-18
stage 13
Anterior Intestinal Portal
Blood Islands
Blood Vessels
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesoderm
Neural Plate/Tube
Somites
 
19-24
stage 20
stage 22
Widespread Expression
 
25
stage 25
Widespread Expression
 

Entry 3

GEISHA IdELF1.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GGGGCGGCGCCGCGGATGTCTGGATGATTATTTTCATAAATGTGATGGGACCTTTTCAGTTTTGTGTATATATAATTTG
ATTCAGAAGCAAGACGTTACAAAGCTACCTAATTTCTGCATTTAATTGTTAGAATTCATGCTTTAGAACAGATTTTGAT
TTTCTGTTAATTGCTAAATGTTATCATAAAATTGCATATTACTAATGTTTCAAAGTACAGGCATGAAGAAACGTGCTTT
TTATGTTATGAAGACGTTATTTTGAGGTTGTTTGCCAAAGCTCCAAACTTCTTTCTTACTGTATGTTTTCAGTCTGTTG
CTGATTTACATTGCAATAAGATTATTATAACCTTTTTCTGTTTAATCTGTACATGTATCACTTAGCTTTTGAAGCAACA
GTTACTTTTCATTGGACGTTTTCATTCCATGCGTATGAATGTTGCTGGATATCTTTCATACCGGAGAATTACATCAATT
TTACACACCGATAACCAGATATCCTCTTGCATTTTTTCTTGCAGCACAAGCTCTTGTGTGTGCAGAACGGAATATACAC
TCCTATTGAGAGTACACAAAACATTTATTCCAGTCAATGGACAATGCCCTGTCAATATTTCATAAGAAAACATCAGATA
GATATACTTTAATTACAGAAGCTAACAGCATCACTACAGGTGCAAAAGTTTCATGCCATTTGTGACTATGAAGCCTTAA
CAATCTTGCTTTCTACTTCAGATTATCCGTAGGCGGGCAGGGACAA
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Unlabeled
 
4-6
stage 4
Mesoderm
Primitive Streak
 
7-10
stage 8
stage 10
Neural Plate/Tube
Primitive Streak
Somites
neural plate (weak)
neural plate (weak) / somites (weak) / anterior primitive streak (weak)
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.48307

Mouse

EmageMGI:107180
EurexpressMGI:107180
MGI GXDMGI:107180

Frog

Xenbase492874

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-980526-335
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