GEISHA - A Chicken Embryo Gene Expression Database
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TNFRSF19
TNF receptor superfamily member 19

Gene
Official SymbolTNFRSF19
Official Full NameTNF receptor superfamily member 19
CGNC ID12859
also known astumor necrosis factor receptor superfamily member 19, Troy-long
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001080103
PolypeptideNP_001073572
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.10477
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human55504ENSG00000127863MIM:606122
Mouse29820ENSMUSG00000060548All phenotypic alleles (5):Targeted, knock-out(2) Targeted, other(2) Gene trapped(1) MGI:1352474
Xenopus100485234483769
Zebrafish559725ENSDARG00000041869ZDB-GENE-030131-6760ZFIN:ZDB-GENE-030131-6760
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418943
Ensembl GeneENSGALG00000017119
KEGGgga:418943

Entry 1

GEISHA IdTroy.Drew.2007Data SourcePublication
Complete cDNA Template Probeshow
CACATAACAGAGGGGTAAAGGTTTAATTGTAAGAAATGGATCCTAAAGGATTACAAGGAGAAGACAAATTGAAGATGCT
TATAATCTTACTTGCATATTTGCTAAGTAGGGTAATTTGTGAGACTGGAGATTGCAGAGAACAAGAATTTAGGGACCAC
GCTGGGAACTGTATTCTCTGCAAACAGTGTGGACCAGGAATGGAACTCTCAAAGGAATGCGGCTTTGGATATGGGGAGG
ATGCACAGTGCATGACTTGCAGGCCAAACAGATTCAAGGAAGACTGGGGCTTTCAGAAGTGCAAGCCTTGTCTGGATTG
TGCTCTAGTTAACCGCTTTCAGAAGGCCAACTGTTCTGCCACCAGCAATGCACTATGTGGAGACTGTTTACCGGGGTTT
TATAGGAAGACCAAGCTTGGAGGCTTTCAAGACATGGAGTGTGTTCCCTGTGGTGATCCTCCTCCTCCCTATGAACCCC
ACTGTACCACCAAAGTAAACCTTGTGAAGATCCCATCAACTGCTTCCAGTCCTCGAGACACTGCTCTAGCAGCAGTTAT
ATGCAGTGCACTTGCAACAGTGCTCTTGGCTCTTCTTATTCTTTGTGTTATCTATTGCAAGAGGCAGTTTATGGAGAAG
AAACCAAGCTGGTCTCTGAGATCACAAGACATTCATTACAGTGGCTCTGAATTGTCTTGTTTTGATAGACCACGGCTAA
ATGAATACGACCACAGAACGTGCTGCCAGTGCCAGAGAAGCACGTCACAGACCTGTGGGCCTGTTCATTTGATTCCTTC
ACTGTGTTGTGATGAAACCTGTAGCATGGAACACAGCAGTCACAGTTGTGCTTTGCAATCACAGACTACACTTAATGAA
AGGACTTCTGACTCTGTTGGAGAAATGATTCCTGCCTTCCTTGGTTCTCTTTCACACTCTGCTTGTGGAGACATTTCAG
ATGCTTGGCCTCTGATGCAAAACTCAGCTTGTTGTGACAGCATTTCTTTCTGTGAATCATATTCAGAACTGGCTGGGGT
TGCTGCAAAATCCTGCAGTCTGGAGACTGAAAATGAAACTGCCATTGAGTCAGATAATAACCAGGAGCTAAGTGATGTA
CTTACTTCAGCAAAGTCTCCTGATGGAAACATTGCAAAGTCCTTTGAAATCTCCAAGCATAGAACATATATAGAAGTTT
CATCACTTCAGAACTCAGCTGCTGCTGAATCCCAGCCAAATACAAAGTGTAATGGAACAGCAGATGACTCTACAGACTG
ATAAAGAGGAAAGCAA
CitationDrew CF, Lin CM, Jiang TX, Blunt G, Mou C, Chuong CM, Headon DJ. The Edar subfamily in feather placode formation. Dev Biol. 2007 May 1;305(1):232-45. Epub 2007 Feb 16.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsAuthors said: Novel sequences have been submitted to GenBank; cTroy-long DQ360499, cTroy-short DQ360500. For ISH cTroy: codons 17–257 were used for the probe. Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # DQ360499).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
stage 30
stage 30
stage 30
Feathers/Scutae
 
31-36
stage 36
stage 36
Feathers/Scutae
Leg Ectoderm
 

Entry 2

GEISHA IdTNFRSF19.Anderson.2020Data SourceDirect Submission
Complete cDNA Template Probeshow
CTTTTAATTCACGTCACTCTGTCCTTCTCACTGTAGCATTTTGTGTGAATTCCATATTACACGTAAAAACAGATTCCTA
ACTTTTTTTAATACCTCTGAATTGAATCCTTGGAGTTCCTTGCGTGCCTAGTTCATAAATATCAACTTTCTTCCCTGTT
TATTCCTTATGACTTTTATGACTGTGGTTTGTTGTAGCACTTCCTAAAAAACTGTGGATTCCGCAGCCATTTATCCCTA
GCATAGTTTTAACTTCTGTGAGTAATCCCTGTAACCTCTACTGGCTCACTGCGTTCGACAGGCTCCAGCCTGCTAGTTG
TGACCTCTAGCAGTCATTCTGTAGAAATTCCCGATGTGCCTTGACAAAAGCAAAGCAATCAGCAAAACAAATGCAATTT
TGCATTAAATATTACTCATCTTTCTGCACGTGGTTTGTATGGCAATGGAAATGATGAGACAGTCATGTTCCATAACAGA
AAGAGACTTCTTCTTTGAAGAACCCGGTGGAAGATTAACACTGTACAATGGTTAGGCTGAGTATAGGCAGCCAAAATCA
ATGAGATTATTAACGTGTGCAAAAACTGTTGATTAACAGTTGTCAAATTCAAGCCAAAGGGAAGAAACTACATAAGGGG
TTTATCTTAATCAATAAGTACTCCTACTTGATCTCTTATGTAGAATAGTACTCAGTTATACAAGGAATATAATTACACA
ACTAAATACTGAAAAGTGTATATTCAGATACGAATAGTTTTGAATAAATTCTTTGGATACTTTCACACATTTAAGAAGT
GTTGAAATATTATTTTTCACCCAGTGTGCATGAAGAGATGTGTGCTTCTTTGTAAATACTTGTAAATAGAACAAAAAAC
CAATGTGCATTTCATTACACGGAAAGATCTTTTTAGAACGTGTGGATTTTTCACTTCTCATTAATAGCAGTTCTTTAAA
ATGCTGTGTTCCAAACTTTTGCCAGCATCTGTCACAGTACGTATGTTTTCCCATTGCAATTTACACTTCGTATAATGTT
TTTGTCCGGCAACTCCAGATAGAAGGACTCATCTTCACATGAGTGACAGATGGCTTCGGAGCAGAGTGGGAGGAAGAAT
GAAAAGAGTGCTTTTCAAATATGTGTATATTGTGTATATATTTCTTTCCTTAATTTAACCAAATTGGTCTTTTTTATAT
TGCCTGTGGCAAGCAATGTTGTACATGCCAATAGAAAACATACACTACCACCGCATTTTGACTGCCCACATATCACATC
TAAGGACTTACAGTGCTGTTTTTAATGGTCTTTTAAAAATGTAAATTAAAACCTTGTATAAACTGCTTTGTAATACTTT
TTTTGTTTTTTACTTGTGAATAAAACATTACTTGAATCGTC
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST162f9 (GenBank: CR386946.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Epiblast
Primitive Streak
stage 3+
4-6
stage 4
stage 5
stage 5
Area Pellucida
Epiblast
Extraembryonic Mesoderm
Head Process
Primitive Streak
stage 5-
7-12
stage 8
stage 9
stage 10
stage 10
stage 11
stage 11
stage 11
Area Opaca
Dermomyotome
Diencephalon
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Somites
Splanchnic Mesoderm
stage 10+
stage 10-
stage 8-
13-18
stage 13
stage 13
stage 13
stage 14
Forebrain
Hindbrain
Midbrain
Notochord
Splanchnic Mesoderm
 
19-24
stage 21
stage 24
Forebrain
Head Mesenchyme
Leg Mesenchyme
Lung
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.10477

Mouse

EmageMGI:1352474
EurexpressMGI:1352474
MGI GXDMGI:1352474

Frog

Xenbase483769

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-6760
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