Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

TFAP2C
transcription factor AP-2 gamma

Gene

Official Symbol	TFAP2C
Official Full Name	transcription factor AP-2 gamma
BirdBase ID	BB-GG18485
CGNC ID	5810
also known as	transcription factor AP-2 gamma\|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_417497
Polypeptide	XP_417497
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	7022	ENSG00000087510		MIM:601602
Mouse	21420	ENSMUSG00000028640	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:106032
Xenopus	496506, 398790			488670
Zebrafish	494033	ENSDARG00000040606	ZDB-GENE-041212-61	ZFIN:ZDB-GENE-041212-61

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	419327
Ensembl Gene
KEGG	gga:419327

Entry 1

GEISHA Id	AP2gamma.Li.2008	Data Source	Publication
Complete cDNA Template Probe	show ATGTTGTGGAAACTGGCAGATAACGTCAAGTACGAGGAGGACTGCGAGGACCGCCACGATGGGAGCAGCAACGGGAACC CGCGGCTCCCGCACCTCTCGGCGGTCAGCCAGCACCTGTACAGCCCGGCCCCGCCGCTCTCCCACTCCGGAGCCTCCGA CTTCCAGCCTCCTTACTTCCCCCCCCCTTACCAGCCGCTGCCTTACTCCCAATCCAGCGACCCCTACTCGCACCTCGGG GACCCGTTCTCCATCAACCCGCTGCACCAGCCGCCGCCGCCGCCCCCCAGCCAGCAGCAGAGCGCTTGGCCCAACCGCC AGAGCCAGGAGCCCGCCGGCCTCCCCCCGCACGGCCGCCCCGGCCTCGTCCCGCACCTCTCGGCGCTGGAGAGCGGCTC GGCCGGCGGCCGTCGGGAAACGTTCCGGCGCTCCGACCTCTTGTTGCCCCACGGGCACGGCCTGGATGCCTCGGCGCTG GCCGACAACCTGGGGCTCCACGACATGGCCCATCAGATAGAGGACGTACAGAACGTGGAAGACCAACACTTACTAATGC ACGACCAGACGGTCATTAGAAAAGGTCCCATTTCCTTAACGAAGAACAGCGCTCTGAGCCTCCCCTGCCAGAAGGACGG ACTGATCGGAGTGGTCATAAACCCCAACGAAGTGTTCTGCTCCGTGCCGGGGCGGCTGTCCCTCCTCAGCTCCACATCG AAGTACAAAGTGACCGTGGCGGAGGTGCAGAGGCGGCTCTCTCCCCCGGAGTGTCTCAATGCCTCTCTGCTGGGAGGTG TGCTCCGAAGAGCCAAATCTAAAAATGGTGGCAGATCATTAAGGGAAAAACTGGATAAAATTGGCTTGAACCTTCCAGC TGGTAGAAGGAAAGCTGCAAATGTGACACTATTGACATCTTTGGTGGAAGGTGAAGCTGTGCACCTCGCTCGTGACTTC GGATACGTGTGTGAGACTGAGTTCCCCTCCAAGGCTGTGGCTGAGTACCTGACCCGGCCGCACATGGGCCGCAACGAGA TGGCCAACAGGAAGAACATGCTGCTGGCTGCCAAGCAGATCTGTAAGGAATTCACAGACCTCCTCACTCAGGACAGAAC TCCGCTGGGAAACACGAGACCCAGTCCCATCCTGGACCCTGGCATCCAGGGCTGTTTGACTCATTTTAGCCTGATCACA CATGGCTTTGGGAGCGCCGCCATCTGTGCTGCCATGACATCCGTCCAGAACTACCTAAATGAAGCATTAAAAATAGCAG ACAAAACATACATGAACACAGGCGACCAGAGCCCTGCAGAAACCAACAAAACCATCGATAAAATGGACAAGCACAGGAA GTAAAGGGGAACAAACAGACTCGAGACTCTTCCTCCTTAACGCAGACTGGGATCTTCTTGCCGGGGGGAACGTAGCAAT TTGGGTACTTTTTTTTTTTTCTTCTTTATTAAGAAAGGAGGGAAAAGGAAACGAGAACAAAACCATTTGGGATCTTCAC TCCTCCTGGATCCAGGAGACAAGTCTTTCCAAAAGCTGCCGCATCCCTTCTCTGTGGAAGCAGTGACCTGAAGATAAGT ACTTGGTACCCGTGTGTTGCCATCCTTTGCTGTAAAAGTGGTGCTATAGGGGTTTCTCATGGAAGTGTACGAAGAGATG AAATACGTAGATTGCTTTCCCACATCTCCGTACCTGGTGGCGACCAGCACCGTGTGTAGTTCTTAAGAGACAGATTTGA CATGGGAGGTTATTTGTGATCAGATAAATTTTCAGGGTTTTATTCTCTCTTAATACAACAGCAACAGTAAAGCAGTATT AAACAACGCTATATAGATTTATGTACATTAAAATTTTTTTATAAACACCCGAAATAGTAAGATTACTCTTTTTCCTTTT TGTTCTTTTTCCCTTTATTTTCAGATTACCGTAAGAGAGTGCTAAAATCCTGGTGGATAAT
Citation	Li X, Glubrecht DD, Mita R, Godbout R. Expression of AP-2delta in the developing chick retina. Dev Dyn. 2008 Nov;237(11):3210-21.
Copyright	Copyright © 2008 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # XM_417497.3)

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

25-30

stage 27

Retina

31-41

stage 31

stage 37

stage 41

Retina

Entry 2

GEISHA Id	AP2Y.Qiao.2012	Data Source	Publication
Complete cDNA Template Probe	show ATGTTGTGGAAACTGGCAGATAACGTCAAGTACGAGGAGGACTGCGAGGACCGCCACGATGGGAGCAGCAACGGGAACC CGCGGCTCCCGCACCTCTCGGCGGTCAGCCAGCACCTGTACAGCCCGGCCCCGCCGCTCTCCCACTCCGGAGCCTCCGA CTTCCAGCCTCCTTACTTCCCCCCCCCTTACCAGCCGCTGCCTTACTCCCAATCCAGCGACCCCTACTCGCACCTCGGG GACCCGTTCTCCATCAACCCGCTGCACCAGCCGCCGCCGCCGCCCCCCAGCCAGCAGCAGAGCGCTTGGCCCAACCGCC AGAGCCAGGAGCCCGCCGGCCTCCCCCCGCACGGCCGCCCCGGCCTCGTCCCGCACCTCTCGGCGCTGGAGAGCGGCTC GGCCGGCGGCCGTCGGGAAACGTTCCGGCGCTCCGACCTCTTGTTGCCCCACGGGCACGGCCTGGATGCCTCGGCGCTG GCCGACAACCTGGGGCTCCACGACATGGCCCATCAGATAGAGGACGTACAGAACGTGGAAGACCAACACTTACTAATGC ACGACCAGACGGTCATTAGAAAAGGTCCCATTTCCTTAACGAAGAACAGCGCTCTGAGCCTCCCCTGCCAGAAGGACGG ACTGATCGGAGTGGTCATAAACCCCAACGAAGTGTTCTGCTCCGTGCCGGGGCGGCTGTCCCTCCTCAGCTCCACATCG AAGTACAAAGTGACCGTGGCGGAGGTGCAGAGGCGGCTCTCTCCCCCGGAGTGTCTCAATGCCTCTCTGCTGGGAGGTG TGCTCCGAAGAGCCAAATCTAAAAATGGTGGCAGATCATTAAGGGAAAAACTGGATAAAATTGGCTTGAACCTTCCAGC TGGTAGAAGGAAAGCTGCAAATGTGACACTATTGACATCTTTGGTGGAAGGTGAAGCTGTGCACCTCGCTCGTGACTTC GGATACGTGTGTGAGACTGAGTTCCCCTCCAAGGCTGTGGCTGAGTACCTGACCCGGCCGCACATGGGCCGCAACGAGA TGGCCAACAGGAAGAACATGCTGCTGGCTGCCAAGCAGATCTGTAAGGAATTCACAGACCTCCTCACTCAGGACAGAAC TCCGCTGGGAAACACGAGACCCAGTCCCATCCTGGACCCTGGCATCCAGGGCTGTTTGACTCATTTTAGCCTGATCACA CATGGCTTTGGGAGCGCCGCCATCTGTGCTGCCATGACATCCGTCCAGAACTACCTAAATGAAGCATTAAAAATAGCAG ACAAAACATACATGAACACAGGCGACCAGAGCCCTGCAGAAACCAACAAAACCATCGATAAAATGGACAAGCACAGGAA GTAAAGGGGAACAAACAGACTCGAGACTCTTCCTCCTTAACGCAGACTGGGATCTTCTTGCCGGGGGGAACGTAGCAAT TTGGGTACTTTTTTTTTTTTCTTCTTTATTAAGAAAGGAGGGAAAAGGAAACGAGAACAAAACCATTTGGGATCTTCAC TCCTCCTGGATCCAGGAGACAAGTCTTTCCAAAAGCTGCCGCATCCCTTCTCTGTGGAAGCAGTGACCTGAAGATAAGT ACTTGGTACCCGTGTGTTGCCATCCTTTGCTGTAAAAGTGGTGCTATAGGGGTTTCTCATGGAAGTGTACGAAGAGATG AAATACGTAGATTGCTTTCCCACATCTCCGTACCTGGTGGCGACCAGCACCGTGTGTAGTTCTTAAGAGACAGATTTGA CATGGGAGGTTATTTGTGATCAGATAAATTTTCAGGGTTTTATTCTCTCTTAATACAACAGCAACAGTAAAGCAGTATT AAACAACGCTATATAGATTTATGTACATTAAAATTTTTTTATAAACACCCGAAATAGTAAGATTACTCTTTTTCCTTTT TGTTCTTTTTCCCTTTATTTTCAGATTACCGTAAGAGAGTGCTAAAATCCTGGTGGATAAT
Citation	Qiao Y, Zhu Y, Sheng N, Chen J, Tao R, Zhu Q, Zhang T, Qian C, Jing N. AP2γ regulates neural and epidermal development downstream of the BMP pathway at early stages of ectodermal patterning. Cell Res. 2012 Nov;22(11):1546-61.
Copyright	© 2012 Shanghai Institutes for Biological Sciences
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # XM_417497.3).