GEISHA - A Chicken Embryo Gene Expression Database
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NFYA
nuclear transcription factor Y subunit alpha

Gene
Official SymbolNFYA
Official Full Namenuclear transcription factor Y subunit alpha
CGNC ID2358
also known asnuclear transcription factor Y subunit alpha|nuclear transcription factor Y, alpha, nuclear transcription factor Y, alpha
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006325
PolypeptideNP_001006325
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.1949
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly39091FBgn0035993
Human4800MIM:189903
Mouse18044ENSMUSG00000023994All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3) MGI:97316
Xenopus394530, 399368942006
Zebrafish83915, 573719ENSDARG00000042004, ENSDARG00000001621ZDB-GENE-010501-1, ZDB-GENE-040718-491ZFIN:ZDB-GENE-010501-1, ZFIN:ZDB-GENE-040718-491
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419917
Ensembl GeneENSGALG00000003247
KEGGgga:419917

Entry 1

GEISHA IdChEST930n8Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GTCTTTTTGTCCAGAAATGTCTGCAGCTCATTTTCTGTCACTCTTCCTTACTGAGCTGCATTTTGTGCTGTTACATTAA
TAATTTCACTTAATAGCCGTGAAAAAATTCTCTGAGTATCACATGCTGTATATTGGTTAGGAAATGGAAATGTTGTAAG
CATGTAATTGGAGAGAGTGAAGCTGCTGCAGAATCTCCCTGCCAGAGTGGCTTACTTTGAGCTTTTTCTCATTAGGAGT
CTCAGTAAAAGATTAGGAGTGCTGTAGTTAATGAAGTTTCTTTTATTATACTTTGCTCTTGGGCTGTGCATGAATGTAC
TTATAGTGTCTGGAAAAGTTGTCCAGCTTTTATGCTTTATTGGTTAGAGTGCAGCAGGAAAAGATAATTTACAAAATCC
AGCAGTGCAGCGTGGAGGGAGCTGTAGAAACTAAAGGTATTTGATGCTGATGATGAGCCCAGCACAGTGACTCTTGCTC
AGTTCTCTGGCTGGTCATTACATTAAGATAGGTAAGCAGTTAGCTGTGTGTGCTATCCACTTCAGATCCTGGTTTTGCA
CCATCAGACTTTTTCATTGTTCTGTTTGTTTTCTCTCCTGTTCCCCAGGTCCAGGGGCAGCCGTTAATGGTGCAGGTGA
GCGGTGGGCAGCTGATCACATCGACTGGCCAGCCCATCATGGTGCAGGCTGTGCCTGGGGGCCAGGGCCAGACAATCAT
GCAAGTCCCTGTTTCTGGAACGCAAGGACTGCAGCAGATTCAGTTGGTCCAGCCAGGTCAGATTCAAATTTCAGGTGGG
CAGGCTGTACAGGTACAGGGGCAGCAAGGCCAAAACCCACAAATCATATACAGCAGCCACAGACTGCAGTTACTGCTGG
CCAAAACAGGTTACTGCACAACCTGAAAGGGTTTTCTTGAAAGAACAGGAACAAACTTGGCAAATAATTAAAATATGGT
TAA
Commentsno specific expression detected stages 4-21.
no images

Entry 2

GEISHA IdNFYA.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAAACTGACAGAAACTGAAGGGGG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAATGCCAAACCTGCTCCTCCcDNA Template Length906
Forward cDNA Template Probeshow
NCTCAANTTATCCGGGGCTATGGTGGTCTTCACAGGGGGGGCTGGACCTAAACACTTAGTACCTAGGCAAGCACTCTGC
TTCACAGGGTTGCTTGTATATGTATTACAGACTCCATCACATTTCACATCCTAAGAACAGGGCAAGCTTAAAAATCTGT
AATGAACAACAAGAAGTTGCATTAAGGTATGCAGCCAGAAACTAGTTGTAGGAAAAAAACACTATACTGTTATTATTTT
TTAAAAATGTAACAACGTCCNGNGNGNCANCTNNTAAANACTNCTNTTTTTTANGGGGANNCTNTGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Area Pellucida
Extraembryonic Mesoderm
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
 
7-12
stage 8
stage 9
stage 10
stage 11
Anterior Intestinal Portal
Blood Islands
Extraembryonic Mesoderm
Head Mesenchyme
Headfold
Heart Tube
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Stage 7+/8-.
19-24
stage 19
stage 20
stage 24
Widespread Expression
Anti-Heart
25
stage 25
Widespread Expression
Anti-Heart
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.1949

Mouse

EmageMGI:97316
EurexpressMGI:97316
MGI GXDMGI:97316

Frog

Xenbase942006

Fruit Fly

BDGPFBgn0035993

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-010501-1, ZDB-GENE-040718-491
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