Geisha

home

|

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

RDH10
retinol dehydrogenase 10

Gene

Official Symbol	RDH10
Official Full Name	retinol dehydrogenase 10
BirdBase ID	BB-GG16712
CGNC ID	11661
also known as	retinol dehydrogenase 10\|retinol dehydrogenase 10 (all-trans)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic	Genbank
RNA	NM_001199459
Polypeptide	NP_001186388
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.2606

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	157506	ENSG00000121039		MIM:607599
Mouse	98711		All phenotypic alleles (5):Chemically induced(2) Targeted, knock-out(1) Targeted, other(2)	MGI:1924238
Xenopus	496504, 446860, 431995			944960
Zebrafish	562840, 378722	ENSDARG00000058730, ENSDARG00000012369	ZDB-GENE-070112-2242, ZDB-GENE-030909-7	ZFIN:ZDB-GENE-070112-2242, ZFIN:ZDB-GENE-030909-7

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	420183
Ensembl Gene
KEGG	gga:420183

GEISHA Id	RDH10.Reijntjes.2010	Data Source	Publication
Complete cDNA Template Probe	show `GGGTGCAGGATCAGAAAAGAAATTGAGCCTTTCCTTCCACCGTTGAAACCAGAATACTGTGTGAAGCAGGCTATGAGAG CTATCCTTACAGACCAGCCGATGATCTGCACACCTCGCCTCATGTATATGGTCACCTTCATGAAAAGTATTCTGCCCTT TGAAGCAGTTGTGTGCATGTACCGGTTTTTGGGAGCAGACAAGTGTATGTACCCCTTCATTGCTCAAAGGAAACAGGCT ACAAACAACAATGAAGCAAAAAATGGAATTTAACACTGGTTTGGATGGACTAACGTTTATAGGTGAATATGATGTTACC TGAGTGAATCGTGAAGTGCACTTGCATCTAAGAGATGCAAAAAGTCATCATCTTACTGTGGCATTCTCTTGGGTCCTCA ACCTGTGTACCTGTGT`
Citation	Reijntjes S, Zile MH, Maden M. The expression of Stra6 and Rdh10 in the avian embryo and their contribution to the generation of retinoid signatures. Int J Dev Biol. 2010;54(8-9):1267-75.
Copyright	© 2010 UBC Press
Comments	The cDNA template used to generate the probe was obtained by PCR as described in Reijntjes et al.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 4

stage 4

stage 5

Early Mesoderm
Epiblast

band of mesoderm

7-12

stage 7

stage 8

stage 9

stage 10

Heart
Intermediate Mesoderm
Somites

endocardial tube

13-18

stage 14

stage 16

stage 16

stage 16

Eye
Heart
Intermediate Mesoderm
Somites

19-23

stage 19

stage 19

stage 20

stage 21

stage 23

stage 23

stage 23

stage 23

Cardiovascular
Eye
Hindgut
Limb Buds
Mesonephros
Neural Plate/Tube
Somites
Tail

coelomic epithelium
intersomitic segments
roof plate

Data from NCBI Unigene EST Profile
Unigene ID: Gga.2606

Mouse

Emage	MGI:1924238
Eurexpress	MGI:1924238
MGI GXD	MGI:1924238

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-070112-2242, ZDB-GENE-030909-7

Home

|

Contact

University of Arizona

NICHD

National Institute of Health

Hy-Line

© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona