GEISHA - A Chicken Embryo Gene Expression Database
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TRANK1
tetratricopeptide repeat and ankyrin repeat containing 1

Gene
Official SymbolTRANK1
Official Full Nametetratricopeptide repeat and ankyrin repeat containing 1
CGNC ID51328
also known asLBA1, TPR and ankyrin repeat-containing protein 1|lupus brain antigen 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_418827
PolypeptideXP_418827
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.54934
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9881ENSG00000168016
Mouse320429ENSMUSG00000062296All phenotypic alleles (2):Targeted, other(2) MGI:1341834
Xenopus1004935376048564
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420728
Ensembl GeneENSGALG00000012057
KEGGgga:420728
GEISHA IdChEST924b10Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GTCGCAAAGGGCTTGGAATTTGATGATGTACTCCTTTACAACTTTTTCACAGACTCAGAGGCTAGCAAAGAATTGAAAA
TCATTTCTTCTTACACTCCTGATTCAGATGTGCAAGTAGGAAGCAAATTGCTAATTGAAATGCCTTTAGAGGATGCTAC
TGCTATGCAAAAGAGACCTACCTCTTTTAATGCAGAAATGTACAAGATGCTGAATGGGGAACTGAAGCAGTTGTATACT
GCCATTACAAGAGCCAGGGTCAATCTTTGGATCTTTGATGAAAACAGCGATAAACGAGCACCAGCTTTTAAGTATTTCA
TCAAAAGAGGATTTGTTCAAGTTGTCAAAACAGATGAAAATAAAGACTTGGATGATAGCATGTTTGCTAAAACTTCATC
TCCGGAAGAATGGATTGCACAGGGAGACTACTATGCTAAACATCAGTTCTGGGAGGTTGCAGCCAAATGTTACCAAAAG
GGAGGAGCAGCTGAGAAGTCAAAGCTGGCCCTGGCACACGATGCTGTTCTCAAAGTGCACTCAAAGAAAAGCAGCCCCA
GAGAAAAACAGATGGAATATATGACATTGGCTAAAACTTACTTGGAATGTGGAGAACCAAAACTGTCACTAAAATGTCT
GTTTCAGTCAAAGGAGTTCCGACTTTGTGCAGAGCTGTGTAAAAAGTTAGGAAAGATGAAAGATGCTGCAGTGTACTAT
CAGAAAAACCAGTGCTACAAAGAAGCATCTGAATGTTATGAACAAATTGAGGAGTTTGATCTGGCAATTAAGATGTATT
GTCAAGAGGAGCTGTATGAAGAAGCAGCGAAGGCAGTTGAAAGATATGAAGAGATGTTAAATGCNAGA
CommentsNo specific expression detected stage 12.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 16
Nasal Placcode/Nerve
 
19-22
stage 19
stage 22
stage 22
Amnion
Hindbrain
Midbrain
Nasal Placcode/Nerve
Somatopleure
hindbrain (FB)
roof plate (MB)
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.54934

Mouse

EmageMGI:1341834
EurexpressMGI:1341834
MGI GXDMGI:1341834

Frog

Xenbase6048564

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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